prot_S-dermatodea_contig1052.365.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1052.365.1
Unique Nameprot_S-dermatodea_contig1052.365.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length650
Homology
BLAST of mRNA_S-dermatodea_contig1052.365.1 vs. uniprot
Match: D8LTE9_ECTSI (RecQ-mediated genome instability protein 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTE9_ECTSI)

HSP 1 Score: 436 bits (1120), Expect = 2.430e-140
Identity = 355/743 (47.78%), Postives = 418/743 (56.26%), Query Frame = 0
Query:    8 QTAAEVRESMSALGVHLRQDWIAHCLE-----HMNAAGRGAPQG--AKEEIYRLLLVCDLREAGEACLPAGVGDMAKERIKGKMVVQVESARDVAKSFEQREKVDGGSAHHTLKLALGDGKQTVAAFEYRRIQGLSADPPPGLKLLLVEPWVRRGMLLLSSENTTVLGGEVASLVAARESAQ-NGEEKTGESPTTGSSSHGHNQPAGGGNGPIPNSQRGGDGARQPANGSGRQTRPSTPXXXXXXXXXXXXXXXXPGTTQARRDDTQGRSG----GTGGSSGAVA---------------------------------RPGQAPERAVFNPYAGITQ-------------------------IKPNPAVRAVAGTTSSNDRPSEGVTRSGES---WGRAQGGEARVPAFRD-SDEDEPEFEYDQEPXLXXXXXXXXQPPDET-------PVRNRRGSGARGIRSDPPLTPGSSSSPLXXXXXVTPQPNIVSARVQHERLREEGRRRSR------------DARGGDIADIEGD-SGGGSARDG----PRKKRGRTQG--GSPGSSGGEWELGDDPSFPPRGPFTSLADLEGPTATGG-VYRTKAVVSDTMGCKLRKKKYLLAIEIEDGTAVLRVRLSDTITRRLFGVDAREYKKICQADRDQGFNIQARVEQEIREMEGIMEIDFAPAAAATQSPGAPETPCTAASQGSASGDSEWSLPVLLSVSKPTDADYKRLLSRVQALL 649
            QTA  VR+SM+ LGVHLR DW+ HCLE        A G G  Q   A+E +YR  L CDLREAGEACLPAGVG M KER+KGKMVVQVE+ARD+AK+ EQREKVDG SAHHTLKLALGDG+QTVAAFEYRR+QGL ADPP GLKLLLVEPWVRRG+LLLSSENTTVLGGEV+SLV ARE+A+  G + T  + T  +++    +P    N P   + R    +    N   R       XXXXXXXXXXXXXXXX G+   R D+    SG     +  SSG  A                                 RP  +    VFNPYA                             +    +     GT  S        +RS  S    GR +GGE RVPAF+D  D+D P FEY +EP          +PP E         VRN R  G   +RSDPP    S+ SP XXXXX                                      D   G++ADIEG+  GGG +R G     R KRGR+    GS    G E   G  PS PP GP+TSL DL+   A GG +YR KAVVSDT  CK+RKKKYLL +EIEDGTAV+ VRLS+ ITRRLFGV+ARE+KKI QAD ++  +IQ RVE+EIREMEG+MEI  +  A AT SP +P TP  A SQ SA+GDSEW LP+++SV  PTD D   LLSRV +LL
Sbjct:    3 QTATRVRQSMAGLGVHLRLDWVKHCLEAGGGMDPGAIGNGQRQQSEAQEGVYRTFLACDLREAGEACLPAGVGGMVKERVKGKMVVQVENARDIAKNLEQREKVDGSSAHHTLKLALGDGRQTVAAFEYRRVQGLVADPPLGLKLLLVEPWVRRGILLLSSENTTVLGGEVSSLVEARETARAGGAQSTAGAATNATNNDDTLEPRTSRNQPGEPAGRTATDSGAAGNSGPRXXXXXXXXXXXXXXXXXXXXXXXGGSH--RHDENADPSGVVDLSSSSSSGGNADTPLSSQGRRXXXXXXXXXXXXXXXXXXXXXXXRPSGSGS-GVFNPYAAAXXXXXXXXXXXXXXXXXXXXXXXXXXTLSATSSAAETVGTARSQSPQGAARSRSSGSSGGQGRPRGGETRVPAFQDLEDDDGPGFEYLEEPDFDDEEHDN-EPPKEAVAAANAAAVRNGRNPG---MRSDPPRVSTSTGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVGDGEVADIEGEFGGGGRSRTGLEVSSRSKRGRSSSEIGSRAGGGRERSNGTRPS-PPSGPYTSLEDLDRLAAAGGGMYRVKAVVSDTKNCKIRKKKYLLVVEIEDGTAVVSVRLSEQITRRLFGVEAREFKKIFQADPEKAISIQTRVEKEIREMEGVMEIQTS--AGATSSP-SPATPGAAMSQNSATGDSEWGLPMVVSVKPPTDGDCLELLSRVTSLL 734          
BLAST of mRNA_S-dermatodea_contig1052.365.1 vs. uniprot
Match: A0A2P6VIC4_9CHLO (RecQ-mediated genome instability protein 1 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VIC4_9CHLO)

HSP 1 Score: 100 bits (250), Expect = 2.350e-18
Identity = 62/163 (38.04%), Postives = 89/163 (54.60%), Query Frame = 0
Query:   20 LGVHLRQDWIAHCLEHMNAAG--RGAPQGAKEE-IYRLLLVCDLREAGEACLPAGVGDMAKERIKGKMVVQVESARDVAKSFEQREKVDGGSAHHTLKLALGDGKQTVAAFEYRRIQGLSADPPPGLKLLLVEPWVRRGMLLLSSENTTVLGGEVASLVAARE 179
            LG  L+  W+A C+ H++A G   G P   +   + + LL  DL   G A LP G+  +    ++GK ++Q +   ++  +   R      S +  LKL L DG Q VA  EYR    L +  P G KL++ +  VRRGMLLL+ EN +VLGG VA+L AAR+
Sbjct:   13 LGARLQPAWLAACVAHLDARGGFNGLPVERRARLVLQQLLPADLNTCGAASLPPGIQSLHDNTLRGKFLLQADEVLNIGAAVRDRY-TGTDSNNRCLKLLLTDGAQQVAGLEYRPTPALHSAMPAGCKLVVRDAPVRRGMLLLTPENCSVLGGGVAALEAARQ 174          
BLAST of mRNA_S-dermatodea_contig1052.365.1 vs. uniprot
Match: A0A383VJY1_TETOB (DUF1767 domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VJY1_TETOB)

HSP 1 Score: 99.4 bits (246), Expect = 8.920e-18
Identity = 65/163 (39.88%), Postives = 93/163 (57.06%), Query Frame = 0
Query:   24 LRQDWIAHCLEHMNAAGRGA----PQGA-KEEIYRLLLVCDLREAGEAC-LPAGVGDMAKERIKGKMVVQVESARDVAKSFEQREKVDGGSAHHT-LKLALGDGKQTVAAFEYRRIQGLSADPPPGLKLLLVEPWVRRGMLLLSSENTTVLGGEVASLVAARE 179
            ++Q W+   L+ +  A  GA    P+   ++++   LL+ D R AG    LPA + DM K+ ++GK ++Q++ A ++A   + R +     AH+  LKL L DG Q + A EYR    L    P G+KLLLV P VRRG+LLL  EN  VLGG V  L AAR+
Sbjct:   20 IKQQWLEQLLQQLQTAHDGAFGQLPRDQQRQKLLEQLLMADFRAAGAGGHLPAAIQDMHKQTMQGKFMLQLDEAVNIAAGIKDRYREP---AHNRCLKLHLTDGVQQLVAVEYRHCPALGLLMPAGIKLLLVNPAVRRGVLLLQPENVVVLGGVVERLEAARQ 179          
BLAST of mRNA_S-dermatodea_contig1052.365.1 vs. uniprot
Match: A0A7S4PCI8_GUITH (RecQ-mediated genome instability protein 1 n=3 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PCI8_GUITH)

HSP 1 Score: 95.9 bits (237), Expect = 4.060e-17
Identity = 57/172 (33.14%), Postives = 86/172 (50.00%), Query Frame = 0
Query:   10 AAEVRESMSALGVHLRQDWIAHCLEHMNAAGRGAPQGAKEEIYRLLLVCDLREAGEACLPAGVGDMAKERIKGKMVVQVESARDVAKSFEQREKVDGGSAHHTLKLALGDGKQTVAAFEYRRIQGLSADPPPGLKLLLVEPWVRRGMLLLSSENTTVLGGEVASLVAARESA 181
            A  +  S+ +LG HL   W+          GR A +    E+Y L L  DLR +G ACLP G+  M K+ + G  V+Q++   ++++  E R     G     LKL L DG + +   E   I+ LS + P G+K+L+ +  +RRG+ L    N  VLGG  + L   R+ A
Sbjct:   13 AGSLGASLKSLGFHLEDGWLRQAHRACRRTGRDADK----ELYELALYSDLRLSGRACLPPGIRSMHKQTVSGTFVLQIDEVINISEPNEHRLADTRG---RMLKLLLTDGTENICGLELNEIRDLSVNSPAGVKVLVKDFEMRRGVALFGPHNLCVLGGMCSDLEKKRQKA 177          
BLAST of mRNA_S-dermatodea_contig1052.365.1 vs. uniprot
Match: A0A7J7QC97_9CHLO (RMI1_N domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QC97_9CHLO)

HSP 1 Score: 88.6 bits (218), Expect = 8.330e-17
Identity = 58/125 (46.40%), Postives = 74/125 (59.20%), Query Frame = 0
Query:   57 VCDLREAGEAC-LPAGVGDMAKERIKGKMVVQVESARDVAKSFEQREKVDGGSAHHT-LKLALGDGKQTVAAFEYRRIQGLSADPPPGLKLLLVEPWVRRGMLLLSSENTTVLGGEVASLVAARE 179
            + D R AG    LPA V DM K+ ++GK ++Q++ A ++A   + R +     AH+  LKL L DG Q + A EYR    L    P G+KLLLV P VRRGMLLL  EN  VLGG V  L AAR+
Sbjct:    1 MADFRSAGAGGHLPAAVQDMHKQVMQGKFMLQLDEAVNIAAGIKDRYREP---AHNRCLKLHLTDGVQQLVAVEYRHCPALGLLMPAGIKLLLVNPAVRRGMLLLQPENVVVLGGVVERLEAARQ 122          
BLAST of mRNA_S-dermatodea_contig1052.365.1 vs. uniprot
Match: A0A5P1FHM6_ASPOF (RecQ-mediated genome instability protein 1 n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FHM6_ASPOF)

HSP 1 Score: 94.4 bits (233), Expect = 2.070e-16
Identity = 58/171 (33.92%), Postives = 87/171 (50.88%), Query Frame = 0
Query:   13 VRESMSALGVHLRQDWIAHCLEHMNAAGRGAPQGAKEEIYRL----LLVCDLREAGEACLPAGVGDMAKERIKGKMVVQVESARDVAKSFEQREKVDGGSAHHTLKLALGDGKQTVAAFEYRRIQGLSADPPPGLKLLLVEPWVRRGMLLLSSENTTVLGGEVASLVAARE 179
            + E +  LG+ LR++W+  C+  ++ +G G  +    E  +L     L  D+   G   LPA V  M K  ++G  V+Q++   ++A    +R           LKL+L DG Q V   EYR I+ L    P GLK+++    +RRG+L+L  E   VLGG V  L AARE
Sbjct:  105 IDELLQRLGLRLRREWLESCVSGLDRSGLGFERMGVSEKAKLCFEQFLFSDMSYCGAGILPANVSGMHKVELEGPFVLQIDEVINIAVPLRERYHRAHAGTKRCLKLSLTDGIQRVFGMEYRPIKDLDVIGPAGLKIIVRNIHIRRGLLMLVPEVLEVLGGLVEDLEAARE 275          
BLAST of mRNA_S-dermatodea_contig1052.365.1 vs. uniprot
Match: I0YM16_COCSC (RecQ-mediated genome instability protein 1 (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YM16_COCSC)

HSP 1 Score: 92.0 bits (227), Expect = 7.030e-16
Identity = 56/172 (32.56%), Postives = 90/172 (52.33%), Query Frame = 0
Query:   12 EVRESMSALGVHLRQDWIAHCLEHMNAAGRGAPQGAKEEIYRLL----LVCDLREAGEACLPAGVGDMAKERIKGKMVVQVESARDVAKSFEQREKVDGGSAHHTLKLALGDGKQTVAAFEYRRIQGLSADPPPGLKLLLVEPWVRRGMLLLSSENTTVLGGEVASLVAARE 179
            EV+ S++ +G+HL+  +I   +  +       P    EE  +L+    L  DL   G  CLP  +       ++G+ V+QV+ A D A   +QR   +G      LKL+L DG++   AFE   I  +    P GLK+++ +  ++RGML+L  EN +V+GGEV  +  AR+
Sbjct:    3 EVKASLAEMGIHLKSAFITKVMRLLTT-----PTAPVEERVQLIMSHFLTADLNMCGSGCLPHNLHSEHNSVLRGRHVLQVDEAVDTAACAKQR--YEGAGGRRCLKLSLTDGQRRAFAFEQTPIAAIKTLCPAGLKVVITDAPIKRGMLVLKPENISVIGGEVERMEQARQ 167          
BLAST of mRNA_S-dermatodea_contig1052.365.1 vs. uniprot
Match: A0A8J5XN38_DIALT (DUF1767 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XN38_DIALT)

HSP 1 Score: 92.8 bits (229), Expect = 7.830e-16
Identity = 53/142 (37.32%), Postives = 74/142 (52.11%), Query Frame = 0
Query:   17 MSALGVHLRQDWIAHCLEHMNAAGRGAPQGAKEEIYRLLLVCDLRE-AGEACLPAGVGDMAKERIKGKMVVQVESARDVAKSFEQREKVDGGSAHHTLKLALGDGKQTVAAFEYRRIQGLSADPPPGLKLLLVEPWVRRGML 157
            + AL +  R+DW+A C+ +  A   G P    E + R LL  D+R  AG   LP G G + + R+ G  V+QV+   DVA+  ++R       A   LK  L DG  +V   EY  +  LS   PPG K+L+  P VRRG+L
Sbjct:   17 LEALRLSAREDWLAACVANARA---GPPAALLEHVVRQLLAADMRACAGRPALPGGAGSVVRARLAGSFVLQVDELVDVARKRDERAADTPAGARRVLKARLTDGFSSVCGIEYTPLPELSPALPPGAKVLVSNPVVRRGLL 155          
BLAST of mRNA_S-dermatodea_contig1052.365.1 vs. uniprot
Match: A0A804KVA0_MUSAM (RecQ-mediated genome instability protein 1 n=3 Tax=Musa TaxID=4640 RepID=A0A804KVA0_MUSAM)

HSP 1 Score: 91.7 bits (226), Expect = 1.190e-15
Identity = 57/170 (33.53%), Postives = 83/170 (48.82%), Query Frame = 0
Query:   13 VRESMSALGVHLRQDWIAHCLEHMNAAGRGAP----QGAKEEIYRLLLVCDLREAGEACLPAGVGDMAKERIKGKMVVQVESARDVAKSFEQREKVDGGSAHHTLKLALGDGKQTVAAFEYRRIQGLSADPPPGLKLLLVEPWVRRGMLLLSSENTTVLGGEVASLVAAR 178
            + E +  LG+ LR DW+  C + + AAG G       G  +  +   L+ D+  +G   LP  V  M K  ++G  VVQV+   +++    +R           LKL++ DG Q V   EYR I+ L      GLK++L    +RRG+LLL  E   +LGG    L AAR
Sbjct:   82 IDEFLRKLGLRLRPDWLESCADRLMAAGSGFEGLDVAGKAKRCFEQFLLSDMNVSGAGVLPENVHLMHKTELEGPFVVQVDEIVNISAPLRERYHDTPAGCKRCLKLSITDGVQRVFGMEYRPIKELEVLAASGLKVVLRNVHIRRGLLLLVPEAFAILGGMADELDAAR 251          
BLAST of mRNA_S-dermatodea_contig1052.365.1 vs. uniprot
Match: A0A1E5VPI5_9POAL (RecQ-mediated genome instability protein 1 (Fragment) n=1 Tax=Dichanthelium oligosanthes TaxID=888268 RepID=A0A1E5VPI5_9POAL)

HSP 1 Score: 90.5 bits (223), Expect = 3.430e-15
Identity = 53/164 (32.32%), Postives = 82/164 (50.00%), Query Frame = 0
Query:   17 MSALGVHLRQDWIAHCLEHMNAA-GRGAPQGAKEEIYRLLLVCDLREAGEACLPAGVGDMAKERIKGKMVVQVESARDVAKSFEQREKVDGGSAHHTLKLALGDGKQTVAAFEYRRIQGLSADPPPGLKLLLVEPWVRRGMLLLSSENTTVLGGEVASLVAARE 179
            +  LG+ LR +W+  C   +    G G  +      +   L  D+ + G   LP GVG M    + G  VVQV+   +++   ++R +         LKL++ DG Q +   EYR I+ L+   P GLK++L    +RRG+L+L  E   +LGG V  L AAR+
Sbjct:  192 LRGLGLRLRPEWLESCAAGIPGFDGLGGAEAQARRCFEQFLFADMNDCGAGVLPEGVGGMHAAVLDGPFVVQVDEIVNISAPLKERYRDAHAGPKRCLKLSMTDGIQRIFGMEYRPIKYLAVLAPAGLKIVLRNVHIRRGLLMLVPEVIEILGGVVDELEAARD 355          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1052.365.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTE9_ECTSI2.430e-14047.78RecQ-mediated genome instability protein 1 n=2 Tax... [more]
A0A2P6VIC4_9CHLO2.350e-1838.04RecQ-mediated genome instability protein 1 n=1 Tax... [more]
A0A383VJY1_TETOB8.920e-1839.88DUF1767 domain-containing protein n=1 Tax=Tetrades... [more]
A0A7S4PCI8_GUITH4.060e-1733.14RecQ-mediated genome instability protein 1 n=3 Tax... [more]
A0A7J7QC97_9CHLO8.330e-1746.40RMI1_N domain-containing protein n=1 Tax=Scenedesm... [more]
A0A5P1FHM6_ASPOF2.070e-1633.92RecQ-mediated genome instability protein 1 n=2 Tax... [more]
I0YM16_COCSC7.030e-1632.56RecQ-mediated genome instability protein 1 (Fragme... [more]
A0A8J5XN38_DIALT7.830e-1637.32DUF1767 domain-containing protein n=1 Tax=Diacrone... [more]
A0A804KVA0_MUSAM1.190e-1533.53RecQ-mediated genome instability protein 1 n=3 Tax... [more]
A0A1E5VPI5_9POAL3.430e-1532.32RecQ-mediated genome instability protein 1 (Fragme... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033472RecQ mediated genome instability protein, DUF1767SMARTSM01161DUF1767_2coord: 14..103
e-value: 9.7E-15
score: 65.0
IPR032199Recq-mediated genome instability protein 1, C-terminal OB-fold domainPFAMPF16099RMI1_Ccoord: 491..645
e-value: 1.0E-9
score: 38.3
IPR042470RecQ mediated genome instability protein, N-terminal, subdomain 2GENE3D2.40.50.770coord: 97..186
e-value: 4.3E-20
score: 73.6
IPR013894RecQ mediated genome instability protein, N-terminalPFAMPF08585RMI1_Ncoord: 21..179
e-value: 1.8E-29
score: 103.0
IPR039215RecQ-mediated genome instability protein 1PANTHERPTHR14790FAMILY NOT NAMEDcoord: 12..645

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1052contigS-dermatodea_contig1052:5097..12104 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1052.365.1mRNA_S-dermatodea_contig1052.365.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1052 4957..12296 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1052.365.1 ID=prot_S-dermatodea_contig1052.365.1|Name=mRNA_S-dermatodea_contig1052.365.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=650bp
MMRPSDLQTAAEVRESMSALGVHLRQDWIAHCLEHMNAAGRGAPQGAKEE
IYRLLLVCDLREAGEACLPAGVGDMAKERIKGKMVVQVESARDVAKSFEQ
REKVDGGSAHHTLKLALGDGKQTVAAFEYRRIQGLSADPPPGLKLLLVEP
WVRRGMLLLSSENTTVLGGEVASLVAARESAQNGEEKTGESPTTGSSSHG
HNQPAGGGNGPIPNSQRGGDGARQPANGSGRQTRPSTPGRQQQPSAAPAR
AEPSPGTTQARRDDTQGRSGGTGGSSGAVARPGQAPERAVFNPYAGITQI
KPNPAVRAVAGTTSSNDRPSEGVTRSGESWGRAQGGEARVPAFRDSDEDE
PEFEYDQEPDLEDDMEEEQQPPDETPVRNRRGSGARGIRSDPPLTPGSSS
SPLPPPPPVTPQPNIVSARVQHERLREEGRRRSRDARGGDIADIEGDSGG
GSARDGPRKKRGRTQGGSPGSSGGEWELGDDPSFPPRGPFTSLADLEGPT
ATGGVYRTKAVVSDTMGCKLRKKKYLLAIEIEDGTAVLRVRLSDTITRRL
FGVDAREYKKICQADRDQGFNIQARVEQEIREMEGIMEIDFAPAAAATQS
PGAPETPCTAASQGSASGDSEWSLPVLLSVSKPTDADYKRLLSRVQALL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033472DUF1767
IPR032199RMI1_C
IPR042470RMI1_N_2
IPR013894RMI1_N
IPR039215RMI1