mRNA_S-dermatodea_contig105.354.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig105.354.1
Unique NamemRNA_S-dermatodea_contig105.354.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig105.354.1 vs. uniprot
Match: D8LN13_ECTSI (Regulator of chromosome condensation-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN13_ECTSI)

HSP 1 Score: 424 bits (1091), Expect = 4.420e-139
Identity = 283/618 (45.79%), Postives = 348/618 (56.31%), Query Frame = 1
Query:    7 IFVGEGDSSFCQLP-----------SISEPLSPQHDDD-----SKILQISCGTAVAVALVGVK-----------GRPTRLLEWGTGLYGERLSSPEPQTEKEATG-ERQYRTTELQPLQLPTEVFTLPPRLS---VRSIACGAHFVLAAAESGGCIAWGGGRDPR-SLGRGGCGSCISLAC-TAAAAPGIPRPSSGMPDWVDKPLGAGGLKVASLAAGDDHAVAVCANGTTWAWGRGDCGQLGCGAPLEDAGAGGASHGSCVPTTVGIP----------GSLRPSATSAVGDRE--------RPALALAAACGRDHSAVLTKGGHLWTFGSGLHGQLGLGTVGERAWTPLHVRTLEGVGEMQIDGSFTGIASVACGAWHTAAVSTTGDVYTWGWARFGALGPSP--PDEP-RPQNRGAVVAKQSSGGGNDAR----------KTASNT--DEGAEVRPYPGLVDGLDDLLSEGDE-IVSVGCGARYTLALTRKRRAFVWGQVAPSAD--GGGGGSFRRSSSDTPR-----------------ASFACPRELKPAELLRAAPAAEPTGGDDTNQRCSNRGXXXXXXEPAREGNASRSEETRWKVSAAGCGPWYVVLGLE 1602
            I VG GDSSFCQ+P             +    P  ++D     +KI QI+CG    +A V               RP+ LLEWGTGLYGERLS+   +T     G ER + +    P Q+      L  R S   +R IACGAHFV+A+ E+GGCI+WGGGR+ R +LGRG CG+C      +  AAP +  PSS  PDWV +PLG GG KVA LAAGDDH +AV  +G+ WAWGRGDCGQLG G+P + A   G    +CVP  V +P          G L  +++ A G             AL + AACGRDHSA++T  G +WTFGSGLHGQLGLGTVGE +  P  V  L GVG M+ DGSFTG+ +VACGAWHTAA+STTGDVYTWGWARFGALGPSP     P RPQ      A   S   ND+           K+A +T  +E  EVRPYPGLVD +DD+L++ D+ +VSV CGARYT+A + K RAFVWGQVAP     GG GG                              F+ PRE+KPAELL+ A        +    RC          +  R G A    ++RW+VSA GCGPW+VV GL+
Sbjct:    7 ILVGVGDSSFCQIPCPWASWSRQTADANSKSHPSRNEDVRRVQTKISQIACGATTCLAAVNXXXXXXXXSAIDHARPSFLLEWGTGLYGERLST---ETSVPQQGDERNHASFLNHPAQVALSSLPLGLRSSPPVIRYIACGAHFVVASLENGGCISWGGGREGRRALGRGSCGTCGQCRNGSTPAAPPLSYPSSSKPDWVAEPLGLGGSKVADLAAGDDHVIAVGTDGSAWAWGRGDCGQLGYGSPPDGADCDGGGS-ACVPMAVQLPSPASGTPLDEGGLASTSSGAAGAATGVKSGHGVHGALVIRAACGRDHSAIITNDGRIWTFGSGLHGQLGLGTVGETSSIPTVVDALIGVGTMRPDGSFTGMEAVACGAWHTAALSTTGDVYTWGWARFGALGPSPFVTGSPLRPQQDTTASATGDSATINDSGASPASGKRKLKSARSTPAEEEGEVRPYPGLVDEMDDILADDDDQLVSVSCGARYTVATSTKGRAFVWGQVAPPLQHYGGRGGXXXXXXXXXXXXXXXXXXXXXXXXGRRLGPFSAPREMKPAELLQDAAPPNSQMDEGGEGRCC---CEVGSAKGLRAG-ADDEGDSRWRVSAVGCGPWFVVFGLQ 616          
BLAST of mRNA_S-dermatodea_contig105.354.1 vs. uniprot
Match: A0A6H5KPF1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPF1_9PHAE)

HSP 1 Score: 424 bits (1091), Expect = 6.170e-139
Identity = 288/634 (45.43%), Postives = 356/634 (56.15%), Query Frame = 1
Query:    7 IFVGEGDSSFCQLPSISEPLSPQHDDD-----------------SKILQISCGTAVAVALVGVKGR----------------PTRLLEWGTGLYGERLSSPEPQTEKEATGERQYRTTELQ---PL---QLPTEVFTLPPRLSVRSIACGAHFVLAAAESGGCIAWGGGRDPR-SLGRGGCGSCISL--ACTAAAAPGIPRPSSGMPDWVDKPLGAGGLKVASLAAGDDHAVAVCANGTTWAWGRGDCGQLGCGAPLEDAGAGGASHGSCVPTTVGIP----------GSLRPSATSAVG-----------------DRERP-ALALAAACGRDHSAVLTKGGHLWTFGSGLHGQLGLGTVGERAWTPLHVRTLEGVGEMQIDGSFTGIASVACGAWHTAAVSTTGDVYTWGWARFGALGPSP-----PDEPRPQNRGAVVAKQ--------SSGGGNDARKTASNTD--EGAEVRPYPGLVDGLDDLLSEGDE-IVSVGCGARYTLALTRKRRAFVWGQVAPSAD--GGGGGSFRRSSS-------DT------PRASFACPRELKPAELLR-AAPAAEPTGGDDTNQRCSNRGXXXXXXEPAREGNASRSEETRWKVSAAGCGPWYVVLGLE 1602
            I VG GDSSFCQ+P      S Q  D+                 +KI QI+CG    +A V                     P  LLEWGTGLYGERLS+   +T     G+ + + + L    P+    LP  + + PP  ++R IACGAHFV+A+ E+GGCI+WGGGR+ R +LGRG CG+C       T AA P +  PSS  PDWV +PLG GG KVA LAAGDDH +AV  +G  WAWGRGDCGQLG G+P      GG S  +CVP  V +P          G L  +++ A G                  R+RP AL + AACGRDHSA++T  G +WTFGSGLHGQLGLGTVGE +  P  V  L GVG M+ DGSFTG+ +VACGAWHTAA+STTGDVYTWGWARFGALGPSP        P+     +V+           S   G    +T S+T   E  EVRPYPGLVDG+DD+L++ D+ +VSV CGARYTLA + K RAFVWGQVAP     GG GG  ++          DT      P   F+ PRE+KPA+LL+ AAP+        T++R   R              A    ++RWKVS  GCGPW+VV GL+
Sbjct:    7 ILVGVGDSSFCQIPCPWASWSRQTADEKGKSHGSSSNDDVCRVQTKISQIACGATTCLAAVNXXXXXXXXXXXXXXAIDPAPPAYLLEWGTGLYGERLST---ETSVPQQGDERNQESFLNHPAPVAFSSLPLGLRSSPP--AIRYIACGAHFVVASLENGGCISWGGGREGRRALGRGSCGTCGQCHDGSTPAARP-LSYPSSSNPDWVAEPLGLGGSKVADLAAGDDHVIAVGTDGCAWAWGRGDCGQLGYGSPDGVDYDGGGS--ACVPMAVQLPSPASGTPLDEGGLASTSSGAAGAXXXXXXXVKSGHGLQDPRKRPGALVIRAACGRDHSAIITNDGRIWTFGSGLHGQLGLGTVGETSSIPTVVDALIGVGTMRPDGSFTGMETVACGAWHTAALSTTGDVYTWGWARFGALGPSPLVAGFHRRPQQDTTASVIGDSATINDSGASPASGKRKLETTSSTPAAEEGEVRPYPGLVDGMDDILADDDDQLVSVSCGARYTLATSSKGRAFVWGQVAPPLQQYGGRGGGEQKGGDGSSVRGIDTGDRKGPPLGPFSVPREMKPADLLQDAAPS-----NSQTDERREGRCYCEVGSPRGVRAGAVDKGDSRWKVSTVGCGPWFVVFGLQ 627          
BLAST of mRNA_S-dermatodea_contig105.354.1 vs. uniprot
Match: W4GMU7_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GMU7_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.610e-26
Identity = 94/249 (37.75%), Postives = 122/249 (49.00%), Query Frame = 1
Query:  313 LSVRSIACGAHFVLAAAESGGCIAWGGGRDPRSLGRGGCGSCISLACTAAAAPGIPRPSSGMPDWVDKPLGAGGLKVASLAAGDDHAVAV-CANGTTWAWGRGDCGQLGCGAPLEDAGAGGASHGSCVPTTVGIPGSLRPSATSAVGDRERPALALAAACGRDHSAVLTKGGHLWTFGSGLHGQLGLGTVGERAWTPLHVRTLEGVGEMQIDGSFTGIASVACGAWHTAAVSTTGDVYTWGWARFGALG 1056
            LSVRSIACG   VL    +G C+ WG                      A     +  PS   PD          + V  +AAG+ H++A+  A G  ++WG    GQ  C    ++A          + T V +P S                     A G  HSAV++  GHL+TFG GL+ QLG GT     +TP  VR+LEGVG++Q +  FTG+A VACGAWHTAA++TTGDVYTWGW + G LG
Sbjct:   66 LSVRSIACGGSHVLLCTTTGECLWWGD----------------QFNTNATQPKPVVFPS---PD----------VFVTQVAAGEAHSLALDAATGRVFSWGSNAFGQ--CSVTKDEA----------IVTGVPVPQSRF------------------IAAGAHHSAVISCDGHLYTFGWGLYHQLGHGTT-NNVFTPTRVRSLEGVGQLQRN-HFTGLARVACGAWHTAALTTTGDVYTWGWGQHGQLG 253          
BLAST of mRNA_S-dermatodea_contig105.354.1 vs. uniprot
Match: W4GLY5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GLY5_9STRA)

HSP 1 Score: 118 bits (296), Expect = 2.300e-26
Identity = 93/248 (37.50%), Postives = 121/248 (48.79%), Query Frame = 1
Query:  313 LSVRSIACGAHFVLAAAESGGCIAWGGGRDPRSLGRGGCGSCISLACTAAAAPGIPRPSSGMPDWVDKPLGAGGLKVASLAAGDDHAVAV-CANGTTWAWGRGDCGQLGCGAPLEDAGAGGASHGSCVPTTVGIPGSLRPSATSAVGDRERPALALAAACGRDHSAVLTKGGHLWTFGSGLHGQLGLGTVGERAWTPLHVRTLEGVGEMQIDGSFTGIASVACGAWHTAAVSTTGDVYTWGWARFGAL 1053
            LSVRSIACG   VL    +G C+ WG                      A     +  PS   PD          + V  +AAG+ H++A+  A G  ++WG    GQ  C    ++A          + T V +P S                     A G  HSAV++  GHL+TFG GL+ QLG GT     +TP  VR+LEGVG++Q +  FTG+A VACGAWHTAA++TTGDVYTWGW + G L
Sbjct:   66 LSVRSIACGGSHVLLCTTTGECLWWGD----------------QFNTNATQPKPVVFPS---PD----------VFVTQVAAGEAHSLALDAATGRVFSWGSNAFGQ--CSVTKDEA----------IVTGVPVPQSRF------------------IAAGAHHSAVISCDGHLYTFGWGLYHQLGHGTT-NNVFTPTRVRSLEGVGQLQRN-HFTGLARVACGAWHTAALTTTGDVYTWGWGQHGQL 252          
BLAST of mRNA_S-dermatodea_contig105.354.1 vs. uniprot
Match: A0A0W8CI08_PHYNI (E3 ubiquitin-protein ligase HERC4 n=7 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CI08_PHYNI)

HSP 1 Score: 107 bits (267), Expect = 8.260e-22
Identity = 99/349 (28.37%), Postives = 148/349 (42.41%), Query Frame = 1
Query:  283 PTEVFTLPPRLSV----RSIACGAHFVLAAAESGGCIAWGGGRDPRSLGRGGCGSCISLACTAAAAPGIPRPSSGMPDWVDKPLGAGGLKVASLAAGDDHAVAVCANGTTWAWGRGDCGQLGCGAPLEDAGAGGASHGSCVPTTVGIPGSLRPSATSAVGDRERPALALAAACGRDHSAVLTKGGHLWTFGSGLHGQLGLGTVGERAWTPLHVRTLEGVGEMQIDGSFTGIASVACGAWHTAAVSTTGDVYTWGWARFGALGPSPPDEPRPQNRGAVVAKQSSGGGNDARKTASNTDEGAEVRPYPGLVDGLDDLLSEGDEIVSVGCGARYTLALTRKRRAFVWGQVAP 1317
            P E   +P +L+V    +++ CG++ VLA  +S   IAWG  R  +                AAA   + R    +P +V  P+    +++  +AAG  H++AV + G  WAWG    GQLG    ++        H    P  V +P  +R    +A               G  HSA+++  G ++TFG GL+ QLG G+  +    P+ V  L G+         + I  VACG WHTAA++ +GD+YTWGW +   LGP            A VA Q                    V P    V    +   +  ++  V CG R+TL L +      WG  +P
Sbjct:   59 PDEHKNVPVKLNVPERCKTVGCGSNHVLALTDSSRVIAWGWNRSGQ--------------VGAAAIEDVVR----VPTFVKFPIE--DVEIVEVAAGGMHSLAVDSRGRVWAWGCNTYGQLGIDFEVKQ------QH---TPMLVALPADVRVQHVAA---------------GWAHSALISTSGEVFTFGWGLYNQLGHGST-QNEHEPVLVDALRGLD--------SDIVQVACGNWHTAALTASGDLYTWGWGKDSQLGPE-----------ASVATQ--------------------VLPRVVNVSARSETTEDTQDVTDVACGNRFTLVLCQDGSIQCWGPKSP 323          
BLAST of mRNA_S-dermatodea_contig105.354.1 vs. uniprot
Match: A0A329S126_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S126_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.110e-21
Identity = 97/328 (29.57%), Postives = 143/328 (43.60%), Query Frame = 1
Query:  322 RSIACGAHFVLAAAESGGCIAWGGGRDPRSLGRGGCGSCISLACTAAAAPGIPRPSSGMPDWVDKPLGAGGLKVASLAAGDDHAVAVCANGTTWAWGRGDCGQLGCGAPLEDAGAGGASHGSCVPTTVGIPGSLRPSATSAVGDRERPALALAAACGRDHSAVLTKGGHLWTFGSGLHGQLGLGTVGERAWTPLHVRTLEGVGEMQIDGSFTGIASVACGAWHTAAVSTTGDVYTWGWARFGALGPSPPDEPRPQNRGAVVAKQSSGGGNDARKTASNTDEGAEVRPYPGLVDGLDDLLSEGDEIVSVGCGARYTLALTRKRRAFVWG 1305
            +++ACG++ VLA  +SG  +AWG      S G+    +   + C              +P  V+ P+ A  L++  +AAG  H++AV ++G  WAWG    GQLG G+  E        H    P  V +P  +R    +A               G  HSA+++  G ++TFG GL+ QLG G+  ++   P+ V  L G+         + I  VACG WHTAA++ +GD+YTWGW +   LG             A VA Q                    V P    V        +  ++ +V CG R+TLAL R      WG
Sbjct:   79 KAVACGSNHVLALTDSGRIVAWGW----NSSGQVAAAAVEKVVC--------------VPTVVEFPIEA--LQIVEVAAGGMHSLAVESSGRVWAWGCNVYGQLGIGSETEQL------H---TPRLVALPADVRVQHIAA---------------GWAHSALISMSGEVFTFGWGLYNQLGHGSTQDKL-QPVVVDALRGLD--------SDIVQVACGNWHTAALTASGDLYTWGWGKDSQLGLE-----------ASVATQ--------------------VLPQVVNVSASPASSEDAQDVTAVACGNRFTLALCRDGSVQYWG 322          
BLAST of mRNA_S-dermatodea_contig105.354.1 vs. uniprot
Match: A0A2D4BK71_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK71_PYTIN)

HSP 1 Score: 106 bits (265), Expect = 2.230e-21
Identity = 123/418 (29.43%), Postives = 157/418 (37.56%), Query Frame = 1
Query:  100 QISCGTAVAVALVGVKGRPTRLLEWGTGLYGERLSSPEPQTEKEATGERQYRTTELQPLQLPTEVFTLPPRLSVRSIACGAHFVLAAAESGGCIAWGG------GRDPRSLGRGGCGSCISLACTAAAAPGIPRPSSGMPDWVDKPLGAGGLKVASLAAGDDHAVAVCANGTTWAWGRGDCGQLGCGAPLEDAGAGGASHGSCVPTTVGIPGSLRPSATSAVGDRERPALALAAACGRDHSAVLTKGGHLWTFGSGLHGQLGLGTVGERAWTPLHVRTLEGVGEMQIDGSFTGIASVACGAWHTAAVSTTGDVYTWGWARFGALGPSPPDEPRPQNRGAVVAKQSSGGGNDARKTASNTDEGAEVRPYPGLVDGLDDLLSEGD---EIVSVGCGARYTLALTRKRRAFVWGQVAPSAD 1326
            Q+S G  V VA+     R   +  WG G YGE   S               R  E  P    +    L   L  R I+CG H VLA   +G   AWG       G+DP  L      S + L+  A                              +A G  H++A+  NG  W WG+   GQLG      DA A      S V   + +    R               A+  A G  HSA +T    L+T G GL+ QLG G     A  P  V  L+GV     DG   G+ +VACG WHTAAVS+ GDVYTWGW   G LG                                +TD    V   P +VD  D+  S+ D      +V C AR+T+ L+R      WG+    +D
Sbjct:   36 QLSSGETVTVAI----DRAGAVFGWGMGAYGELGDS---------------RGLEAHP----SGAIRLRVPLPCRQISCGMHHVLAIDSAGNIFAWGSNRFGQVGKDPSVLEDVHSPSRVELSTQAL----------------------------HIAGGGTHSLALDVNGAVWTWGQNAQGQLG---RSTDASA------SFVAQPISMTLECR---------------AVTTAAGWKHSAFITTDNKLFTCGWGLYHQLGHGDTRNEA-APRVVDALDGV-----DG---GVVAVACGWWHTAAVSSGGDVYTWGWGPNGQLG--------------------------------STDSTKHV--LPRVVDTTDEYFSQDDPGHHATAVACSARFTVVLSRNGDVHWWGKTTNRSD 335          
BLAST of mRNA_S-dermatodea_contig105.354.1 vs. uniprot
Match: A0A0P1AA17_PLAHL (FOG: RCC1 domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AA17_PLAHL)

HSP 1 Score: 103 bits (258), Expect = 1.140e-20
Identity = 96/326 (29.45%), Postives = 136/326 (41.72%), Query Frame = 1
Query:  328 IACGAHFVLAAAESGGCIAWGGGRDPRSLGRGGCGSCISLACTAAAAPGIPRPSSGMPDWVDKPLGAGGLKVASLAAGDDHAVAVCANGTTWAWGRGDCGQLGCGAPLEDAGAGGASHGSCVPTTVGIPGSLRPSATSAVGDRERPALALAAACGRDHSAVLTKGGHLWTFGSGLHGQLGLGTVGERAWTPLHVRTLEGVGEMQIDGSFTGIASVACGAWHTAAVSTTGDVYTWGWARFGALGPSPPDEPRPQNRGAVVAKQSSGGGNDARKTASNTDEGAEVRPYPGLVDGLDDLLSEGDEIVSVGCGARYTLALTRKRRAFVWG 1305
            + CG + VLA A SG   AWG  R  +               TAA +  +       P  V   L A  + +  +AAG  H++A+ ++G  WAWG    GQLG G   +             P  V +P +++               A + A G  H+A+++  G ++TFG GL+ QLG G+       PL V  L G+         + IA VACG WHTAA++ +GD+YTWGW R G LGP  P  P+       +   SS   ND                               D+I ++ CG R T+AL +      WG
Sbjct:   59 VVCGCNHVLALACSGCVYAWGWNRSGQ--------------VTAAKSDEVVH----TPTKVQFFLHA--VYIVEVAAGGMHSLALDSDGRVWAWGCNAYGQLGIGVREKQL---------TTPALVEMPANVQ---------------AQSIAAGWAHNAIISTSGEVFTFGWGLYNQLGHGST-HNELQPLAVEALRGLD--------SDIAQVACGTWHTAALTASGDLYTWGWKRDGQLGPRDPLTPQVLPSVVNILSGSSTNNND-------------------------------DDITAIACGNRCTVALCKNGLVHYWG 300          
BLAST of mRNA_S-dermatodea_contig105.354.1 vs. uniprot
Match: UPI000D15D67F (probable E3 ubiquitin-protein ligase HERC3 isoform X2 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=UPI000D15D67F)

HSP 1 Score: 97.8 bits (242), Expect = 4.400e-18
Identity = 85/259 (32.82%), Postives = 114/259 (44.02%), Query Frame = 1
Query:  532 GLKVASLAAGDDHAVAVCANGTTWAWGRGDCGQLGCGAPLEDAGAGGASHGSCVPTTVGIPG-SLRPSATSAVGDRERPALALAAACGRDHSAVLTKGGHLWTFGSGLHGQLGLGTVGERAWTPLHVRTLEGVGEMQIDGSFTGIASVACGAWHTAAVSTTGDVYTWGWARFGALGPSPPDEPRPQNRGAVVAKQSSGGGNDARKTASNTDEGAEVRPYPGLVDGLDDLLSEGDEIVSVGCGARYTLALTRKRRAFVWG 1305
            G+++AS+AAG  H +A+   G  WAWG G  GQLG G+ +             V +   IP  +L   A +  G         A ACG  HSAV+T  G L TFG GLHGQ+G G+  E   +P  V T+ G+           I  +A G WHT  ++  GDVY +G  +FG LG                      GGN A  +             P ++D     L E +  V V CGAR++  LT   + F WG
Sbjct:  200 GIRIASVAAGGRHTLALSDVGHVWAWGYGGDGQLGLGSRMR-----------IVSSPQQIPCLNLTEKAVARSGVPIPGKCIKAIACGGRHSAVVTDAGALLTFGWGLHGQVGQGST-EDELSPCCVSTIGGLR----------IVGIAAGLWHTLCITDVGDVYAFGGNQFGQLGV---------------------GGNAAELS-------------PRMIDAP---LLEDESCVEVACGARHSAVLTGSGKIFAWG 399          
BLAST of mRNA_S-dermatodea_contig105.354.1 vs. uniprot
Match: A0A7I4CK59_PHYPA (Uncharacterized protein n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4CK59_PHYPA)

HSP 1 Score: 97.8 bits (242), Expect = 5.910e-18
Identity = 85/259 (32.82%), Postives = 114/259 (44.02%), Query Frame = 1
Query:  532 GLKVASLAAGDDHAVAVCANGTTWAWGRGDCGQLGCGAPLEDAGAGGASHGSCVPTTVGIPG-SLRPSATSAVGDRERPALALAAACGRDHSAVLTKGGHLWTFGSGLHGQLGLGTVGERAWTPLHVRTLEGVGEMQIDGSFTGIASVACGAWHTAAVSTTGDVYTWGWARFGALGPSPPDEPRPQNRGAVVAKQSSGGGNDARKTASNTDEGAEVRPYPGLVDGLDDLLSEGDEIVSVGCGARYTLALTRKRRAFVWG 1305
            G+++AS+AAG  H +A+   G  WAWG G  GQLG G+ +             V +   IP  +L   A +  G         A ACG  HSAV+T  G L TFG GLHGQ+G G+  E   +P  V T+ G+           I  +A G WHT  ++  GDVY +G  +FG LG                      GGN A  +             P ++D     L E +  V V CGAR++  LT   + F WG
Sbjct:  252 GIRIASVAAGGRHTLALSDVGHVWAWGYGGDGQLGLGSRMR-----------IVSSPQQIPCLNLTEKAVARSGVPIPGKCIKAIACGGRHSAVVTDAGALLTFGWGLHGQVGQGST-EDELSPCCVSTIGGLR----------IVGIAAGLWHTLCITDVGDVYAFGGNQFGQLGV---------------------GGNAAELS-------------PRMIDAP---LLEDESCVEVACGARHSAVLTGSGKIFAWG 451          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig105.354.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN13_ECTSI4.420e-13945.79Regulator of chromosome condensation-like protein ... [more]
A0A6H5KPF1_9PHAE6.170e-13945.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W4GMU7_9STRA1.610e-2637.75Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
W4GLY5_9STRA2.300e-2637.50Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A0W8CI08_PHYNI8.260e-2228.37E3 ubiquitin-protein ligase HERC4 n=7 Tax=Phytopht... [more]
A0A329S126_9STRA1.110e-2129.57Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A2D4BK71_PYTIN2.230e-2129.43Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A0P1AA17_PLAHL1.140e-2029.45FOG: RCC1 domain n=1 Tax=Plasmopara halstedii TaxI... [more]
UPI000D15D67F4.400e-1832.82probable E3 ubiquitin-protein ligase HERC3 isoform... [more]
A0A7I4CK59_PHYPA5.910e-1832.82Uncharacterized protein n=4 Tax=Physcomitrium pate... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig105contigS-dermatodea_contig105:21586..24110 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score438.0
Seed ortholog evalue6.5e-120
Seed eggNOG ortholog2880.D8LN13
EggNOG free text desc.guanyl-nucleotide exchange factor activity
EggNOG OGsCOG5184@1,KOG1426@2759
COG Functional cat.DZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
Ec32 orthologEc-27_000990.1
Exons3
Model size1602
Cds size1602
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig105.354.1prot_S-dermatodea_contig105.354.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig105 21586..24110 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924160.085567-CDS-S-dermatodea_contig105:21585..221411622924160.085567-CDS-S-dermatodea_contig105:21585..22141Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig105 21586..22141 -
1694079058.6269226-CDS-S-dermatodea_contig105:21585..221411694079058.6269226-CDS-S-dermatodea_contig105:21585..22141Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig105 21586..22141 -
1622924160.100052-CDS-S-dermatodea_contig105:22431..226161622924160.100052-CDS-S-dermatodea_contig105:22431..22616Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig105 22432..22616 -
1694079058.638581-CDS-S-dermatodea_contig105:22431..226161694079058.638581-CDS-S-dermatodea_contig105:22431..22616Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig105 22432..22616 -
1622924160.1132555-CDS-S-dermatodea_contig105:23249..241101622924160.1132555-CDS-S-dermatodea_contig105:23249..24110Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig105 23250..24110 -
1694079058.648076-CDS-S-dermatodea_contig105:23249..241101694079058.648076-CDS-S-dermatodea_contig105:23249..24110Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig105 23250..24110 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig105.354.1

>prot_S-dermatodea_contig105.354.1 ID=prot_S-dermatodea_contig105.354.1|Name=mRNA_S-dermatodea_contig105.354.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=534bp
MAIFVGEGDSSFCQLPSISEPLSPQHDDDSKILQISCGTAVAVALVGVKG
RPTRLLEWGTGLYGERLSSPEPQTEKEATGERQYRTTELQPLQLPTEVFT
LPPRLSVRSIACGAHFVLAAAESGGCIAWGGGRDPRSLGRGGCGSCISLA
CTAAAAPGIPRPSSGMPDWVDKPLGAGGLKVASLAAGDDHAVAVCANGTT
WAWGRGDCGQLGCGAPLEDAGAGGASHGSCVPTTVGIPGSLRPSATSAVG
DRERPALALAAACGRDHSAVLTKGGHLWTFGSGLHGQLGLGTVGERAWTP
LHVRTLEGVGEMQIDGSFTGIASVACGAWHTAAVSTTGDVYTWGWARFGA
LGPSPPDEPRPQNRGAVVAKQSSGGGNDARKTASNTDEGAEVRPYPGLVD
GLDDLLSEGDEIVSVGCGARYTLALTRKRRAFVWGQVAPSADGGGGGSFR
RSSSDTPRASFACPRELKPAELLRAAPAAEPTGGDDTNQRCSNRGGGDSS
EEPAREGNASRSEETRWKVSAAGCGPWYVVLGLE
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mRNA from alignment at S-dermatodea_contig105:21586..24110-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig105.354.1 ID=mRNA_S-dermatodea_contig105.354.1|Name=mRNA_S-dermatodea_contig105.354.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2525bp|location=Sequence derived from alignment at S-dermatodea_contig105:21586..24110- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCTATCTTTGTTGGCGAGGGGGATTCGAGTTTCTGCCAGCTCCCAAG CATCTCCGAACCCCTCTCTCCGCAACACGACGATGACAGTAAGATCTTGC AGATCAGCTGCGGCACCGCGGTAGCTGTCGCCCTTGTAGGCGTCAAGGGA AGACCGACTCGCCTTCTCGAGTGGGGCACAGGCCTATACGGTGAGAGGTT ATCATCGCCGGAACCGCAGACCGAGAAAGAAGCAACGGGAGAGCGCCAAT ATCGCACTACCGAACTGCAACCCCTCCAACTTCCGACAGAGGTCTTCACC CTCCCGCCGCGGCTGTCCGTTCGATCCATAGCTTGCGGCGCGCACTTCGT CCTCGCAGCGGCGGAAAGCGGTGGCTGCATCGCGTGGGGTGGTGGGCGAG ACCCAAGGTCTCTTGGGCGCGGTGGCTGCGGCAGTTGTATTTCCTTGGCG TGCACGGCTGCCGCGGCCCCGGGTATTCCGCGGCCGAGCTCCGGCATGCC GGACTGGGTCGACAAACCGTTGGGCGCCGGGGGGCTAAAGGTGGCCAGCT TGGCGGCGGGCGACGACCATGCTGTCGCCGTCTGCGCGAATGGGACCACG TGGGCGTGGGGTCGAGGGGACTGCGGACAGCTTGGCTGTGGCGCTCCCCT AGAGGATGCCGGGGCTGGGGGCGCGTCGCACGGCAGCTGTGTACCCACGA CGGTTGGAATACCTGGCTCTTTGCGTCCCAGTGCTACGTCTGCCGTCGGC GATCGCGAGCGCCCGGCCTTAGCTCTAGCTGCAGCATGCGGGCGCGACCA TAGCGCGGTCCTAACAAAGGGTGGGCATCTTTGGACGTTTGGGAGTGGGC TGCACGGGCAGGTGAGCCGCACTACTGGATGTATTAATGTTTTACGCTAA TAGCGAACTATTTGACTCACACATGAGATGTGCGATCTACTCAGTAGTCC AGCGCATTTCCACGTGCTACAAGTACTGCTGTATGATAGTGTGGCGCAAC ACAAAATCAGGATATGAGGAATACCGCAATTCCCATCCTCCCGTTGACAC CCGCGCAAAAGAGTGTGCATCACGAGCCTCAGTCGACGAGCAGGTGCAGT TCTCCGGCGGTCGCCATTGTCCCCCTTTCTGCTGCCCTTTGCAACGTTTT TTCTACCTGCTGGAAGACTCAAAAAGCGTGTACTCCCGAAGTGCTGCGTG GGTACCACTCGAAGATACAGTTGCAGTTTCCCCATCGAAGCATCGTGCGA GCGCACATATGACTATTAATAGTTAACAATGCCGCGGAGAAGCACCGTTC ACATTTATTGAATGTAAATTCAGCTCTTAGTGCAGCCAACCGTTTGGCGC ATACTAGGTGGCCGCACGCTTGACTGCCCGTGCTTCTCGCCAACATCTAT GCTCGACATGTATCGCATGTATCGCATGTGGATCTTACACGTGACTCCTC GCGTCCCGCGTGCCTCACAATACACCCACACACGGGGACCCCAGCTCGGA TTAGGAACCGTGGGCGAGAGGGCGTGGACACCATTGCATGTCCGCACCCT GGAAGGCGTTGGCGAAATGCAGATAGATGGCTCGTTCACCGGCATCGCGT CGGTGGCGTGTGGGGCATGGCATACCGCGGCGGTGTCCACGACTGGGGAT GTGTACACTTGGGGGTGGGCACGCTTTGGGTGAGCTGGCATCTCGCCGGG AGGTCCCACCTGCGATATTCTATACTTGTCTCACAGAAGGGTTGGAATGC GCGCAGTTCCCTGCTGTAGATGTGTACCGCATGTGTTCTTCCCAAACAAC GCTGCCTCCCTGTCCATATCCACCAAAAGTCGAAACTGTTCCACATGTGT ACCGTCCTTTAAACGATAAATGTGTCGGGTTATATTGCGAAATCTGGCAA GGTATCGTAAGGCGTTCTCACTCCCCCTTCCTTCTCGTGCCCACCTCCCG CGTTACTCTCTACCCAAAGGGCCCTGGGGCCTTCGCCACCAGACGAACCC AGGCCTCAAAATCGTGGGGCCGTTGTGGCGAAGCAAAGCAGCGGGGGGGG CAATGACGCTCGGAAAACGGCAAGCAACACAGACGAAGGGGCCGAGGTGC GGCCATACCCCGGCCTAGTGGATGGGTTAGACGATCTCCTGTCTGAGGGC GACGAGATAGTTTCGGTTGGGTGCGGCGCGCGGTACACCCTCGCGCTAAC CCGGAAAAGGCGAGCATTCGTGTGGGGCCAAGTCGCGCCGTCCGCCGATG GAGGCGGCGGGGGCAGTTTTCGCCGCAGCAGCAGTGACACCCCGCGGGCT TCGTTTGCTTGCCCGAGAGAGCTGAAGCCTGCAGAGCTTCTCCGCGCCGC GCCAGCCGCCGAACCGACGGGAGGAGATGATACGAACCAACGTTGTAGCA ACCGCGGTGGAGGGGACAGCAGCGAGGAACCAGCACGAGAGGGGAACGCC AGTAGAAGCGAGGAGACGCGTTGGAAAGTGTCCGCGGCGGGGTGTGGGCC GTGGTACGTCGTTTTGGGCCTCGAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig105:21586..24110-

>mRNA_S-dermatodea_contig105.354.1 ID=mRNA_S-dermatodea_contig105.354.1|Name=mRNA_S-dermatodea_contig105.354.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3204bp|location=Sequence derived from alignment at S-dermatodea_contig105:21586..24110- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCTATCTTTGTTGGCGAGGGGGATTCGAGTTTCTGCCAGCTCCCAAG
CATCTCCGAACCCCTCTCTCCGCAACACGACGATGACAGTAAGATCTTGC
AGATCAGCTGCGGCACCGCGGTAGCTGTCGCCCTTGTAGGCGTCAAGGGA
AGACCGACTCGCCTTCTCGAGTGGGGCACAGGCCTATACGGTGAGAGGTT
ATCATCGCCGGAACCGCAGACCGAGAAAGAAGCAACGGGAGAGCGCCAAT
ATCGCACTACCGAACTGCAACCCCTCCAACTTCCGACAGAGGTCTTCACC
CTCCCGCCGCGGCTGTCCGTTCGATCCATAGCTTGCGGCGCGCACTTCGT
CCTCGCAGCGGCGGAAAGCGGTGGCTGCATCGCGTGGGGTGGTGGGCGAG
ACCCAAGGTCTCTTGGGCGCGGTGGCTGCGGCAGTTGTATTTCCTTGGCG
TGCACGGCTGCCGCGGCCCCGGGTATTCCGCGGCCGAGCTCCGGCATGCC
GGACTGGGTCGACAAACCGTTGGGCGCCGGGGGGCTAAAGGTGGCCAGCT
TGGCGGCGGGCGACGACCATGCTGTCGCCGTCTGCGCGAATGGGACCACG
TGGGCGTGGGGTCGAGGGGACTGCGGACAGCTTGGCTGTGGCGCTCCCCT
AGAGGATGCCGGGGCTGGGGGCGCGTCGCACGGCAGCTGTGTACCCACGA
CGGTTGGAATACCTGGCTCTTTGCGTCCCAGTGCTACGTCTGCCGTCGGC
GATCGCGAGCGCCCGGCCTTAGCTCTAGCTGCAGCATGCGGGCGCGACCA
TAGCGCGGTCCTAACAAAGGGTGGGCATCTTTGGACGTTTGGGAGTGGGC
TGCACGGGCAGATGGCTATCTTTGTTGGCGAGGGGGATTCGAGTTTCTGC
CAGCTCCCAAGCATCTCCGAACCCCTCTCTCCGCAACACGACGATGACAG
TAAGATCTTGCAGATCAGCTGCGGCACCGCGGTAGCTGTCGCCCTTGTAG
GCGTCAAGGGAAGACCGACTCGCCTTCTCGAGTGGGGCACAGGCCTATAC
GGTGAGAGGTTATCATCGCCGGAACCGCAGACCGAGAAAGAAGCAACGGG
AGAGCGCCAATATCGCACTACCGAACTGCAACCCCTCCAACTTCCGACAG
AGGTCTTCACCCTCCCGCCGCGGCTGTCCGTTCGATCCATAGCTTGCGGC
GCGCACTTCGTCCTCGCAGCGGCGGAAAGCGGTGGCTGCATCGCGTGGGG
TGGTGGGCGAGACCCAAGGTCTCTTGGGCGCGGTGGCTGCGGCAGTTGTA
TTTCCTTGGCGTGCACGGCTGCCGCGGCCCCGGGTATTCCGCGGCCGAGC
TCCGGCATGCCGGACTGGGTCGACAAACCGTTGGGCGCCGGGGGGCTAAA
GGTGGCCAGCTTGGCGGCGGGCGACGACCATGCTGTCGCCGTCTGCGCGA
ATGGGACCACGTGGGCGTGGGGTCGAGGGGACTGCGGACAGCTTGGCTGT
GGCGCTCCCCTAGAGGATGCCGGGGCTGGGGGCGCGTCGCACGGCAGCTG
TGTACCCACGACGGTTGGAATACCTGGCTCTTTGCGTCCCAGTGCTACGT
CTGCCGTCGGCGATCGCGAGCGCCCGGCCTTAGCTCTAGCTGCAGCATGC
GGGCGCGACCATAGCGCGGTCCTAACAAAGGGTGGGCATCTTTGGACGTT
TGGGAGTGGGCTGCACGGGCAGCTCGGATTAGGAACCGTGGGCGAGAGGG
CGTGGACACCATTGCATGTCCGCACCCTGGAAGGCGTTGGCGAAATGCAG
ATAGATGGCTCGTTCACCGGCATCGCGTCGGTGGCGTGTGGGGCATGGCA
TACCGCGGCGGTGTCCACGACTGGGGATGTGTACACTTGGGGGTGGGCAC
GCTTTGGCTCGGATTAGGAACCGTGGGCGAGAGGGCGTGGACACCATTGC
ATGTCCGCACCCTGGAAGGCGTTGGCGAAATGCAGATAGATGGCTCGTTC
ACCGGCATCGCGTCGGTGGCGTGTGGGGCATGGCATACCGCGGCGGTGTC
CACGACTGGGGATGTGTACACTTGGGGGTGGGCACGCTTTGGGGCCCTGG
GGCCTTCGCCACCAGACGAACCCAGGCCTCAAAATCGTGGGGCCGTTGTG
GCGAAGCAAAGCAGCGGGGGGGGCAATGACGCTCGGAAAACGGCAAGCAA
CACAGACGAAGGGGCCGAGGTGCGGCCATACCCCGGCCTAGTGGATGGGT
TAGACGATCTCCTGTCTGAGGGCGACGAGATAGTTTCGGTTGGGTGCGGC
GCGCGGTACACCCTCGCGCTAACCCGGAAAAGGCGAGCATTCGTGTGGGG
CCAAGTCGCGCCGTCCGCCGATGGAGGCGGCGGGGGCAGTTTTCGCCGCA
GCAGCAGTGACACCCCGCGGGCTTCGTTTGCTTGCCCGAGAGAGCTGAAG
CCTGCAGAGCTTCTCCGCGCCGCGCCAGCCGCCGAACCGACGGGAGGAGA
TGATACGAACCAACGTTGTAGCAACCGCGGTGGAGGGGACAGCAGCGAGG
AACCAGCACGAGAGGGGAACGCCAGTAGAAGCGAGGAGACGCGTTGGAAA
GTGTCCGCGGCGGGGTGTGGGCCGTGGTACGTCGTTTTGGGCCTCGAGGG
CCCTGGGGCCTTCGCCACCAGACGAACCCAGGCCTCAAAATCGTGGGGCC
GTTGTGGCGAAGCAAAGCAGCGGGGGGGGCAATGACGCTCGGAAAACGGC
AAGCAACACAGACGAAGGGGCCGAGGTGCGGCCATACCCCGGCCTAGTGG
ATGGGTTAGACGATCTCCTGTCTGAGGGCGACGAGATAGTTTCGGTTGGG
TGCGGCGCGCGGTACACCCTCGCGCTAACCCGGAAAAGGCGAGCATTCGT
GTGGGGCCAAGTCGCGCCGTCCGCCGATGGAGGCGGCGGGGGCAGTTTTC
GCCGCAGCAGCAGTGACACCCCGCGGGCTTCGTTTGCTTGCCCGAGAGAG
CTGAAGCCTGCAGAGCTTCTCCGCGCCGCGCCAGCCGCCGAACCGACGGG
AGGAGATGATACGAACCAACGTTGTAGCAACCGCGGTGGAGGGGACAGCA
GCGAGGAACCAGCACGAGAGGGGAACGCCAGTAGAAGCGAGGAGACGCGT
TGGAAAGTGTCCGCGGCGGGGTGTGGGCCGTGGTACGTCGTTTTGGGCCT
CGAG
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