prot_S-dermatodea_contig10369.272.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10369.272.1
Unique Nameprot_S-dermatodea_contig10369.272.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length110
Homology
BLAST of mRNA_S-dermatodea_contig10369.272.1 vs. uniprot
Match: D7G401_ECTSI (RME1, RME-1/EHD family ATPase with a C-terminal EH domain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G401_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 3.740e-35
Identity = 66/75 (88.00%), Postives = 70/75 (93.33%), Query Frame = 0
Query:    1 PFRAKLADTNFIKFPKLKTKMLEDLDEMLSTDIPRLMEMLPRTVAPTRADEQIRNFMQETSGTPNPPKYNAPGGA 75
            PFR+KLADTNF KFPKLK KMLE+LDEMLS DIPRLMEMLPRTVAPTRADEQIRNFMQE++ TP PPKYNAPGGA
Sbjct:  350 PFRSKLADTNFTKFPKLKVKMLEELDEMLSVDIPRLMEMLPRTVAPTRADEQIRNFMQESNDTPTPPKYNAPGGA 424          
BLAST of mRNA_S-dermatodea_contig10369.272.1 vs. uniprot
Match: A0A835YYV9_9STRA (RME1, RME-1/EHD family ATPase with a C-terminal EH domain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYV9_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 2.430e-11
Identity = 32/56 (57.14%), Postives = 43/56 (76.79%), Query Frame = 0
Query:    2 FRAKLADTNFIKFPKLKTKMLEDLDEMLSTDIPRLMEMLPRTVAPTRADEQIRNFM 57
            FR+K  + +F KFPKLK KML+DLDE+LS DIPRLMEMLP +   TRA+ ++ + +
Sbjct:  351 FRSKCEELSFAKFPKLKPKMLQDLDEVLSQDIPRLMEMLPTSDVRTRAEREVASLL 406          
BLAST of mRNA_S-dermatodea_contig10369.272.1 vs. uniprot
Match: A0A4D9CZB1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZB1_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 3.750e-7
Identity = 27/42 (64.29%), Postives = 30/42 (71.43%), Query Frame = 0
Query:    2 FRAKLADTNFIKFPKLKTKMLEDLDEMLSTDIPRLMEMLPRT 43
            FR KL D NF KFPK+K KML DL  +L T IP LME LP+T
Sbjct:  354 FRTKLLDLNFSKFPKIKNKMLADLSHILETQIPALMERLPKT 395          
BLAST of mRNA_S-dermatodea_contig10369.272.1 vs. uniprot
Match: A0A7S2RKL1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RKL1_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 5.080e-7
Identity = 27/41 (65.85%), Postives = 33/41 (80.49%), Query Frame = 0
Query:    2 FRAKLADTNFIKFPKLKTKMLEDLDEMLSTDIPRLMEMLPR 42
            FRAKL++ +F +FPKL  K L DL+EML+ DIPRLME LPR
Sbjct:  359 FRAKLSEEDFSRFPKLNKKHLVDLEEMLTVDIPRLMERLPR 399          
BLAST of mRNA_S-dermatodea_contig10369.272.1 vs. uniprot
Match: A0A7S2AXU0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AXU0_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 3.760e-5
Identity = 24/41 (58.54%), Postives = 30/41 (73.17%), Query Frame = 0
Query:    2 FRAKLADTNFIKFPKLKTKMLEDLDEMLSTDIPRLMEMLPR 42
            F AKL + NF KF K+K K L+  +++LS DIPRLME LPR
Sbjct:  170 FGAKLTELNFTKFNKIKQKHLDQTEQLLSVDIPRLMEQLPR 210          
BLAST of mRNA_S-dermatodea_contig10369.272.1 vs. uniprot
Match: A0A812X475_SYMMI (Calmodulin n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812X475_SYMMI)

HSP 1 Score: 50.1 bits (118), Expect = 5.440e-5
Identity = 23/45 (51.11%), Postives = 33/45 (73.33%), Query Frame = 0
Query:    2 FRAKLADTNFIKFPKLKTKMLEDLDEMLSTDIPRLMEMLPRTVAP 46
            FR+KL + +F KF  LK ++++  D  L+TDIPRLME LPR++ P
Sbjct:   29 FRSKLVELDFSKFAVLKQQLIDAADTTLATDIPRLMEALPRSIDP 73          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10369.272.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G401_ECTSI3.740e-3588.00RME1, RME-1/EHD family ATPase with a C-terminal EH... [more]
A0A835YYV9_9STRA2.430e-1157.14RME1, RME-1/EHD family ATPase with a C-terminal EH... [more]
A0A4D9CZB1_9STRA3.750e-764.29Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2RKL1_9STRA5.080e-765.85Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2AXU0_9STRA3.760e-558.54Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A812X475_SYMMI5.440e-551.11Calmodulin n=1 Tax=Symbiodinium microadriaticum Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040990Domain of unknown function DUF5600PFAMPF18150DUF5600coord: 2..37
e-value: 2.2E-7
score: 31.4
NoneNo IPR availableGENE3D1.10.268.20coord: 1..44
e-value: 8.1E-10
score: 40.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10369contigS-dermatodea_contig10369:897..4190 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10369.272.1mRNA_S-dermatodea_contig10369.272.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10369 897..4192 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10369.272.1 ID=prot_S-dermatodea_contig10369.272.1|Name=mRNA_S-dermatodea_contig10369.272.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=110bp
PFRAKLADTNFIKFPKLKTKMLEDLDEMLSTDIPRLMEMLPRTVAPTRAD
EQIRNFMQETSGTPNPPKYNAPGGARAGGSGYYDEEPDHRWAAGSTGGGS
YPGSPPDGTA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040990DUF5600