mRNA_S-dermatodea_contig10347.254.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig10347.254.1
Unique NamemRNA_S-dermatodea_contig10347.254.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig10347.254.1 vs. uniprot
Match: D8LM50_ECTSI (Uricase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM50_ECTSI)

HSP 1 Score: 343 bits (881), Expect = 8.910e-117
Identity = 166/217 (76.50%), Postives = 180/217 (82.95%), Query Frame = 1
Query:    1 YPQLVSRCRVMVKEDMWNRVITADTTGKHRPHDHAFVKGGPHFMFGRCEGTRNAHGLVVINVFGGVKGLTLFKTTQSSFTNFHKDSNTSLPEAADRLLGTCMDAEWAY-MICSPSFLQDRAHIMDILVEIFAGPADKGVPSPSVQHTCFQMGSEILSAVDGMSEVTLYMPNVHNLPFDLGKYGLVNADQTDLPHIFYPVDEPHGIIQATIKRPISKL 648
            YP LV RCRVMVKED W RV TAD+TGK R HDHAF+K GPH++FGR EGTR   G + I  FGGVKGLTLFKTTQSSFTNFHKD+NTSLPEA DRLLGTCMD EW Y ++ SP F  DRA I+D+LVE FAGPADKGV SPSVQ TCFQMGS +L+ V  +SE T YMPNVHNLPFDL KYGLVNADQT LPHIFYPVDEPHGIIQAT+KRP SKL
Sbjct:   91 YPDLVHRCRVMVKEDTWKRVRTADSTGKTRDHDHAFLKAGPHYLFGRSEGTRQPCGRISIRAFGGVKGLTLFKTTQSSFTNFHKDNNTSLPEAEDRLLGTCMDGEWEYDVLRSPDFSGDRAKIIDVLVEQFAGPADKGVYSPSVQVTCFQMGSAVLATVPSVSECTFYMPNVHNLPFDLAKYGLVNADQTGLPHIFYPVDEPHGIIQATMKRPSSKL 307          
BLAST of mRNA_S-dermatodea_contig10347.254.1 vs. uniprot
Match: A0A836C7Y1_9STRA (Uricase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Y1_9STRA)

HSP 1 Score: 225 bits (574), Expect = 4.890e-71
Identity = 114/221 (51.58%), Postives = 146/221 (66.06%), Query Frame = 1
Query:   10 LVSRCRVMVKEDMWNRVITADTTGKHRPHDHAFVKGGPHFMFGRCEGTRNAHGLVVINVFGGVKGLTLFKTTQSSFTNFHKDSNTSLPEAADRLLGTCMDAEWAY--------MICSPSFLQDRAHIMDILVEIFAGPADKGVPSPSVQHTCFQMGSEILSAVDGMSEVTLYMPNVHNLPFDLGKYGLVNADQTDLPHIFYPVDEPHGIIQATIKRPISKL 648
            LV+ CRV+VK+D+W RV   D+ G    H+HAF K GPH+ + R E  R A     + ++GG KG TL KTTQSSF +FHKD  TSLP+A DRL+G+  D+EW Y        +    +F+  R  I+D + + FAGPAD GVPS SVQ T +QMG  +LS    ++++TLYMPNVHN+PFDL K G+ N D T    I YP+DEPHGIIQATI RP +KL
Sbjct:   30 LVTFCRVIVKQDIWERVQVPDSRGVVTEHNHAFKKVGPHYTYARVEAPRGAP----MRLWGGCKGYTLLKTTQSSFVDFHKDPYTSLPQATDRLMGSNFDSEWTYTPDTVAAAVSGRVNFVAIRDQILDTMTKTFAGPADVGVPSASVQVTLYQMGGAVLSIAPQVTDITLYMPNVHNMPFDLAKLGMSNTDHTGNIDILYPIDEPHGIIQATIVRPGAKL 246          
BLAST of mRNA_S-dermatodea_contig10347.254.1 vs. uniprot
Match: W7TW56_9STRA (Uricase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TW56_9STRA)

HSP 1 Score: 191 bits (485), Expect = 9.260e-57
Identity = 91/216 (42.13%), Postives = 137/216 (63.43%), Query Frame = 1
Query:    1 YPQLVSRCRVMVKEDMWNRVITADTTGKHRPHDHAFVKGGPHFMFGRCEGTRNAHGLVVINVFGGVKGLTLFKTTQSSFTNFHKDSNTSLPEAADRLLGTCMDAEWAYMICS----PSFLQDRAHIMDILVEIFAGPADKGVPSPSVQHTCFQMGSEILSAVDGMSEVTLYMPNVHNLPFDLGKYGLVNADQTDLPHIFYPVDEPHGIIQATIKRP 636
            YP +V++  V + +D+W RV+  D+ G+   H+HAF+K GP          +   G VV++V  G++ L L KTTQS F NFH+D   +L +  DRL+GT +D EW++   +    P +      ++D L++ FAGPADKGV S SVQ T + MG+ +L+ V G+ ++ LYMPN+HN+P DL K+ + N D +  P IF P+D+PHG+I+A I+RP
Sbjct:   91 YPAIVTKVDVQLVKDLWTRVVNKDSHGRIAQHNHAFIKVGPQTTHTHIVAEK-VGGSVVVSVRSGIRSLILLKTTQSGFENFHRDEFRALGDTNDRLVGTSVDGEWSFSAATIASRPDYEALNKTVLDTLIDEFAGPADKGVYSVSVQQTLYDMGTGLLAKVPGVDKIELYMPNIHNIPVDLSKFRIENKDHSGKPDIFLPMDDPHGMIKAIIERP 305          
BLAST of mRNA_S-dermatodea_contig10347.254.1 vs. uniprot
Match: A0A485L9Z9_9STRA (Uricase n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9Z9_9STRA)

HSP 1 Score: 183 bits (465), Expect = 8.210e-55
Identity = 94/219 (42.92%), Postives = 134/219 (61.19%), Query Frame = 1
Query:    1 YPQLVSRCRVMVKEDMWNRVITADTTGKHRPHDHAFVKGGPHFMFGRCEGTRNAHGLVVINVFGGVKGLTLFKTTQSSFTNFHKDSNTSLPEAADRLLGTCMDAEWAYMICSPSFLQDRAHIMDILVEIFAGPADKGVPSPSVQHTCFQMGSEILSAVDGMSEVTLYMPNVHNLPFDLGKYGLVNADQTDLPH--IFYPVDEPHGIIQATIKR-PISKL 648
            +P ++   +V + E  W+R+I  D+ G+ +PH HAFV+GG    +   E    + G V +++  G+ GL + KTT S+F  F KD  T LPE  DRLL T + AEW Y   + +  +  A +  IL+++FAGPAD GVPSP+VQ T F+MG  +L     + ++ +YMPN+HNLP +L  +GL N      PH  IF P DEPHGII+AT+ R P S+L
Sbjct:   13 HPSVIQYAKVKLVEVQWDRIINKDSKGELKPHHHAFVQGGTESRYAIAEARLTSPGNVDVSLSAGLSGLRVLKTTNSAFEGFRKDQFTILPEVHDRLLATAVSAEWEYAHPNATSAE-AAQVRGILIDVFAGPADTGVPSPAVQWTLFKMGEAVLDRCPFVKKIHIYMPNIHNLPVNLKPFGLKNTH----PHGEIFLPTDEPHGIIEATLTRTPSSRL 226          
BLAST of mRNA_S-dermatodea_contig10347.254.1 vs. uniprot
Match: A0A0N7L5S7_PLAHL (Uricase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L5S7_PLAHL)

HSP 1 Score: 186 bits (471), Expect = 1.080e-54
Identity = 95/220 (43.18%), Postives = 131/220 (59.55%), Query Frame = 1
Query:    1 YPQLVSRCRVMVKEDMWNRVITADTTGKHRPHDHAFVKGGPHFMFGRCEGTRNAHGLVVINVFGGVKGLTLFKTTQSSFTNFHKDSNTSLPEAADRLLGTCMDAEWAYM--ICSPSFLQDRAHIMDILVEIFAGPADKGVPSPSVQHTCFQMGSEILSAVDGMSEVTLYMPNVHNLPFDLGKYGLVNADQTDLPH--IFYPVDEPHGIIQATIKRPISKL 648
            +P++VS  +V + E  W R++  D+ G  RPH HAFV   P F        ++ +G   + V GGV GL   KTTQS+F NF +D  T+L +A DRL+ TC+ + W Y+       F    A I ++L+E FAGPAD GVPSP+VQ T ++MG  +L     + E+T+ MPN+HN P DL ++G  N      PH  +F P+DEPHGII ATI R  +KL
Sbjct:   92 HPEIVSLAKVKLFEMPWERLVLPDSKGVMRPHHHAFVSASPGFSTATVTARKSKYGDPEVTVQGGVDGLKALKTTQSAFVNFLRDEFTTLEDAPDRLVSTCISSTWTYISETTRGDFATKAAVIKNVLLETFAGPADVGVPSPAVQFTLYKMGEAVLEKCSYVKEITISMPNIHNNPIDLSRFGCKNIH----PHGEVFLPIDEPHGIISATIVRSTAKL 307          
BLAST of mRNA_S-dermatodea_contig10347.254.1 vs. uniprot
Match: H3GV00_PHYRM (Uricase n=21 Tax=Phytophthora TaxID=4783 RepID=H3GV00_PHYRM)

HSP 1 Score: 185 bits (470), Expect = 1.530e-54
Identity = 90/220 (40.91%), Postives = 132/220 (60.00%), Query Frame = 1
Query:    1 YPQLVSRCRVMVKEDMWNRVITADTTGKHRPHDHAFVKGGPHFMFGRCEGTRNAHGLVVINVFGGVKGLTLFKTTQSSFTNFHKDSNTSLPEAADRLLGTCMDAEWAYM--ICSPSFLQDRAHIMDILVEIFAGPADKGVPSPSVQHTCFQMGSEILSAVDGMSEVTLYMPNVHNLPFDLGKYGLVNADQTDLPH--IFYPVDEPHGIIQATIKRPISKL 648
            +P ++S  +V + E  W RV+  D+ G+ RPH HAFV  G  F        +++HG   + V GGV GL + KTTQS+F +F +D  T+LP+  DRL+ TC+ + W+Y        F+   A + ++L+E F+GPAD GVPSP+VQ T ++MG  +L     + ++ + MPN+HN P DL ++G  N      PH  +F P DEPHGII AT+ R  S+L
Sbjct:   92 HPDIISVAKVKLFETPWERVVVPDSKGQTRPHHHAFVSAGAGFSTAYVVARKSSHGAPEVTVQGGVDGLKVLKTTQSAFVDFFRDEYTTLPDVPDRLVSTCVTSTWSYTPGAIGGDFVARAAEVKNVLLETFSGPADVGVPSPAVQFTLYKMGEAVLERCPYVQDIKITMPNIHNNPIDLARFGCKNIH----PHGEVFLPTDEPHGIISATMVRSASRL 307          
BLAST of mRNA_S-dermatodea_contig10347.254.1 vs. uniprot
Match: A0A5D6XUS0_9STRA (Uricase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUS0_9STRA)

HSP 1 Score: 177 bits (449), Expect = 2.180e-51
Identity = 97/221 (43.89%), Postives = 132/221 (59.73%), Query Frame = 1
Query:    1 YPQLVSRCRVMVKEDMWNRVITADTTGKHRPHDHAFVKGGPHFMFGRCEGTRNAHG-LVVINVFGGVKGLTLFKTTQSSFTNFHKDSNTSLPEAADRLLGTCMDAEW--AYMICSPSFLQDRAHIMDILVEIFAGPADKGVPSPSVQHTCFQMGSEILSAVDGMSEVTLYMPNVHNLPFDLGKYGLVNADQTDLPH--IFYPVDEPHGIIQATIKRPISKL 648
            +PQ+V   +V + E  W RV+TAD+TGK RPH HAFV              +  HG   V+++  G+ G  + KTTQSSF +F +D  T+LP+  DRL+GT + A W  A       F   RA +   L++ FAGPAD GVPS +VQ T FQMG  +L+    +++V++ MPNVHNLP D+ ++GL N      PH  +F P  EPHGIIQAT+ R  S+L
Sbjct:   91 HPQIVDVAKVKLFETHWERVVTADSTGKVRPHHHAFVGVDSGIATTSAVARKAPHGGEPVVSLSAGIDGWRVMKTTQSSFVDFFRDEYTTLPDVPDRLVGTVVKASWTVAPEALRSCFKTQRAQVKKTLLDAFAGPADVGVPSDAVQATLFQMGEAVLNKCPFVTDVSILMPNVHNLPVDVTRFGLKNLH----PHGEVFLPTSEPHGIIQATMVRATSRL 307          
BLAST of mRNA_S-dermatodea_contig10347.254.1 vs. uniprot
Match: A0A8K1FI17_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FI17_PYTOL)

HSP 1 Score: 175 bits (443), Expect = 1.680e-50
Identity = 92/223 (41.26%), Postives = 132/223 (59.19%), Query Frame = 1
Query:    1 YPQLVSRCRVMVKEDMWNRVITADTTGKHRPHDHAFVKGGPHFMFGRCEGTRNAHGLVVINVFGGVKGLTLFKTTQSSFTNFHKDSNTSLPEAADRLLGTCMDAEWAYM-----ICSPSFLQDRAHIMDILVEIFAGPADKGVPSPSVQHTCFQMGSEILSAVDGMSEVTLYMPNVHNLPFDLGKYGLVNADQTDLPH--IFYPVDEPHGIIQATIKRPISKL 648
            +P  +   +V + E  W R++T D+ G  +PH HAFV  G           + AHG   I+V  G++GL + KT++SSF +F +D+ T+LP+  DRL+GT + A W Y      +C   F +    I  +L++ FAGP+D GV SP+VQ T ++MG  +L     + ++T+ MPNVHNLP DL K+GL N      PH  +F P DEPHGII+AT+ R  SKL
Sbjct:   91 HPTKIDVAKVKIFETKWVRLVTPDSKGTRKPHHHAFVGDGSGTATTYVIARKTAHGEPQISVQSGIEGLRVLKTSKSSFVDFFRDAYTTLPDVPDRLVGTVVTATWNYTSEATRVC---FQKQADEIKRVLLDTFAGPSDAGVDSPAVQFTLYKMGEAVLDQCPSVKDITITMPNVHNLPVDLTKFGLKNIH----PHGEVFLPTDEPHGIIRATMVRATSKL 306          
BLAST of mRNA_S-dermatodea_contig10347.254.1 vs. uniprot
Match: K3W9W7_GLOUD (Uricase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W9W7_GLOUD)

HSP 1 Score: 171 bits (433), Expect = 5.450e-49
Identity = 94/224 (41.96%), Postives = 131/224 (58.48%), Query Frame = 1
Query:    1 YPQLVSRCRVMVKEDMWNRVITADTTGKHRPHDHAFVKGGPHFMFGRCEGTRNAHG-LVVINVFGGVKGLTLFKTTQSSFTNFHKDSNTSLPEAADRLLGTCMDAEW-----AYMICSPSFLQDRAHIMDILVEIFAGPADKGVPSPSVQHTCFQMGSEILSAVDGMSEVTLYMPNVHNLPFDLGKYGLVNADQTDLPH--IFYPVDEPHGIIQATIKRPISKL 648
            +PQ++   +V + E  W RV+ AD+TGK RPH HAFV              +  HG   +I++  G+ G  + KTTQSSF +F +D  T+LP+  DRL+GT + A W     A+  C   F   R  +  +L++ FAGPAD GVPS +VQ T +QMG  +L+    + ++T+ MPNVHNLP DL ++GL N      PH  +F P  EPHGIIQA + R  S+L
Sbjct:   91 HPQIIDVAKVKLFETHWERVVNADSTGKVRPHAHAFVGVDSGISTTYAVARKAPHGGEPMISLSSGIDGWRVMKTTQSSFMDFFRDEYTTLPDTPDRLVGTVVKATWNFTSEAFRSC---FKAQREQVKRVLLDTFAGPADVGVPSDAVQATLYQMGEAVLNECPFVKDITILMPNVHNLPVDLTRFGLKNIH----PHGEVFLPTSEPHGIIQAKMVRSTSRL 307          
BLAST of mRNA_S-dermatodea_contig10347.254.1 vs. uniprot
Match: A0A662WET4_9STRA (Uricase n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A662WET4_9STRA)

HSP 1 Score: 168 bits (426), Expect = 8.110e-48
Identity = 90/217 (41.47%), Postives = 123/217 (56.68%), Query Frame = 1
Query:   13 VSRCRVMVKEDMWNRVITADTTGKHRPHDHAFVKGGPHFMFGRCEGTRN-AHGLVVINVFGGVKGLTLFKTTQSSFTNFHKDSNTSLPEAADRLLGTCMDAEWAYM--ICSPSFLQDRAHIMDILVEIFAGPADKGVPSPSVQHTCFQMGSEILSAVDGMSEVTLYMPNVHNLPFDLGKYGLVNADQTDLPH--IFYPVDEPHGIIQATIKRPISKL 648
            +S  +V + E  W R++T D+ GK RPH HAFV     F        ++ + G   + V GGV GL + KTTQS+F  F KD  T+LPE  DRL+ T + + W Y        F    A +  +L+E FAGP+D GVPSP+VQ T ++MG  +L     + ++ + MPN+HN P DL ++G  N      PH  +F P DEPHGII AT+ R  SKL
Sbjct:  106 ISVAKVKLFETPWERMVTPDSNGKMRPHHHAFVSASAGFSTAYVVARKSPSGGAPQVTVQGGVDGLRVLKTTQSAFVKFFKDEYTTLPEVPDRLVSTVVASTWNYTPGAVGGDFTAKAAEVKRVLLETFAGPSDVGVPSPAVQFTLYKMGEAVLEQCPYVKDIKITMPNIHNNPIDLTRFGCKNIH----PHGEVFLPTDEPHGIISATMVRSASKL 318          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10347.254.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM50_ECTSI8.910e-11776.50Uricase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM50... [more]
A0A836C7Y1_9STRA4.890e-7151.58Uricase n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
W7TW56_9STRA9.260e-5742.13Uricase n=2 Tax=Monodopsidaceae TaxID=425072 RepID... [more]
A0A485L9Z9_9STRA8.210e-5542.92Uricase n=2 Tax=Aphanomyces stellatus TaxID=120398... [more]
A0A0N7L5S7_PLAHL1.080e-5443.18Uricase n=1 Tax=Plasmopara halstedii TaxID=4781 Re... [more]
H3GV00_PHYRM1.530e-5440.91Uricase n=21 Tax=Phytophthora TaxID=4783 RepID=H3G... [more]
A0A5D6XUS0_9STRA2.180e-5143.89Uricase n=1 Tax=Pythium brassicum TaxID=1485010 Re... [more]
A0A8K1FI17_PYTOL1.680e-5041.26Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3W9W7_GLOUD5.450e-4941.96Uricase n=1 Tax=Globisporangium ultimum (strain AT... [more]
A0A662WET4_9STRA8.110e-4841.47Uricase n=4 Tax=Peronosporaceae TaxID=4777 RepID=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10347contigS-dermatodea_contig10347:6433..7822 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score329.3
Seed ortholog evalue1.3e-87
Seed eggNOG ortholog2880.D8LM50
Preferred nameUOX
KEGG rclassRC02107,RC02551
KEGG koko:K00365,ko:K07953
KEGG ReactionR02106,R07981
KEGG Pathwayko00230,ko00232,ko01100,ko01120,ko04141,ko05134,map00230,map00232,map01100,map01120,map04141,map05134
KEGG ModuleM00404,M00546
GOsGO:0000255,GO:0003674,GO:0003824,GO:0004846,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005782,GO:0005829,GO:0006082,GO:0006139,GO:0006144,GO:0006145,GO:0006725,GO:0006807,GO:0006996,GO:0007031,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009636,GO:0009987,GO:0010033,GO:0016043,GO:0016491,GO:0016661,GO:0016663,GO:0017144,GO:0018130,GO:0019428,GO:0019439,GO:0019627,GO:0019628,GO:0022607,GO:0031907,GO:0031974,GO:0034641,GO:0042221,GO:0042493,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045471,GO:0046113,GO:0046415,GO:0046483,GO:0046677,GO:0046700,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0055114,GO:0065003,GO:0070013,GO:0071704,GO:0071840,GO:0071941,GO:0072521,GO:0072523,GO:0097305,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901700
EggNOG free text desc.urate oxidase activity
EggNOG OGsCOG3648@1,KOG1599@2759
EC1.7.3.3
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04031,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionUricase
Ec32 orthologEc-06_002470.1
Exons2
Model size651
Cds size621
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10347.254.1prot_S-dermatodea_contig10347.254.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig10347 6463..7822 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924152.7083156-UTR-S-dermatodea_contig10347:6432..64621622924152.7083156-UTR-S-dermatodea_contig10347:6432..6462Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10347 6433..6462 +
1694079053.646516-UTR-S-dermatodea_contig10347:6432..64621694079053.646516-UTR-S-dermatodea_contig10347:6432..6462Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10347 6433..6462 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924152.7184317-CDS-S-dermatodea_contig10347:6462..67191622924152.7184317-CDS-S-dermatodea_contig10347:6462..6719Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10347 6463..6719 +
1694079053.6566033-CDS-S-dermatodea_contig10347:6462..67191694079053.6566033-CDS-S-dermatodea_contig10347:6462..6719Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10347 6463..6719 +
1622924152.7300992-CDS-S-dermatodea_contig10347:7458..78221622924152.7300992-CDS-S-dermatodea_contig10347:7458..7822Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10347 7459..7822 +
1694079053.6642575-CDS-S-dermatodea_contig10347:7458..78221694079053.6642575-CDS-S-dermatodea_contig10347:7458..7822Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10347 7459..7822 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig10347.254.1

>prot_S-dermatodea_contig10347.254.1 ID=prot_S-dermatodea_contig10347.254.1|Name=mRNA_S-dermatodea_contig10347.254.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=207bp
MVKEDMWNRVITADTTGKHRPHDHAFVKGGPHFMFGRCEGTRNAHGLVVI
NVFGGVKGLTLFKTTQSSFTNFHKDSNTSLPEAADRLLGTCMDAEWAYMI
CSPSFLQDRAHIMDILVEIFAGPADKGVPSPSVQHTCFQMGSEILSAVDG
MSEVTLYMPNVHNLPFDLGKYGLVNADQTDLPHIFYPVDEPHGIIQATIK
RPISKL*
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mRNA from alignment at S-dermatodea_contig10347:6433..7822+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig10347.254.1 ID=mRNA_S-dermatodea_contig10347.254.1|Name=mRNA_S-dermatodea_contig10347.254.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1390bp|location=Sequence derived from alignment at S-dermatodea_contig10347:6433..7822+ (Saccorhiza dermatodea SderLu1190fm monoicous)
TATCCGCAATTGGTATCGCGGTGTAGGGTGATGGTGAAGGAAGACATGTG GAACCGTGTTATCACAGCAGATACGACGGGCAAGCACAGACCGCACGACC ACGCTTTTGTCAAGGGTGGGCCGCACTTCATGTTTGGGCGCTGCGAAGGA ACACGAAACGCCCATGGGCTGGTGGTCATCAATGTTTTTGGTGGCGTGAA GGGCTTAACGCTGTTCAAGACCACCCAGTCGTCCTTCACGAACTTCCACA AGGACTCCAACACCTCCCTTCCTGAAGCTGCAGACAGGTTAGCTACGTAC ACGTTATATTTACCCAAGCATACAAATCTGCAATGCTTTAGAAAACCTGG CACTTCAAATATTTGGAAATTGTCTAAACTGCTGGAGCGAATGTCAGCGG ACAAATGGGCCTCTGCACAGCACACTCAATCTCTTGGGGACGCCTGAACT AGGTAACTACGGATTCTACTAGGTAAGGTCGATTGAAACTACGTTGTACA GTCGAGGCTGCAGCAGCTTGACGTTAATGTCTACAATGCACTTGGGTCCA TTCAGTCACGCTGTCGGGGGCAGTGAGACACAAACCGCAGGAGGTGGGGG GGGGGGGTCTTCGGCATGAAGCAGGCTCGCTTGTTATCGTGTGTCAGCGT GCTTCTCACCCGGCATACACATTTATCGGCGTGTACGTTTGAAAAGTTGC TTTCGAAATTTGAACAATCGCGCGGATATCAACTCGAATTTTGCGGCCCA AGACGCGCGGAGGAAGTCAATCCCAAGAGAGTGATGGGGCAGTTGATATG GAAATTGTTTTGCACATATGCTCGGGCAGGAAAACGCTCTTGGCGCCATC AAACGCACGAGATCCTAACAGAACGGAGGTCTTGCCTTCCTTCATTTGAC GGGTTGTTGACAACACACTGATAATCTCATCGATCTCACACGCAATATGT GACGTTGCAATGATCTTCCCGCAATATCCTGTACGCGTCTGTGTTTGTTC ACCGTTTGTGTCATTTCGACGTGCAGACTGCTGGGAACTTGCATGGACGC AGAGTGGGCGTATATGATCTGCTCGCCATCGTTCTTGCAAGACCGCGCTC ATATCATGGACATTCTGGTGGAAATATTCGCCGGACCTGCAGACAAGGGC GTGCCGAGCCCTTCAGTGCAACACACGTGTTTCCAGATGGGATCTGAAAT TCTGTCTGCTGTTGATGGAATGTCAGAGGTTACCCTGTACATGCCGAATG TTCACAACTTGCCGTTTGACCTAGGCAAATATGGCCTGGTCAACGCCGAC CAAACCGATCTCCCCCATATTTTTTATCCTGTGGATGAACCTCACGGGAT TATCCAAGCTACCATCAAGCGCCCTATTTCTAAGCTTTAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig10347:6433..7822+

>mRNA_S-dermatodea_contig10347.254.1 ID=mRNA_S-dermatodea_contig10347.254.1|Name=mRNA_S-dermatodea_contig10347.254.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1242bp|location=Sequence derived from alignment at S-dermatodea_contig10347:6433..7822+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGTGAAGGAAGACATGTGGAACCGTGTTATCACAGCAGATACGACGGG
CAAGCACAGACCGCACGACCACGCTTTTGTCAAGGGTGGGCCGCACTTCA
TGTTTGGGCGCTGCGAAGGAACACGAAACGCCCATGGGCTGGTGGTCATC
AATGTTTTTGGTGGCGTGAAGGGCTTAACGCTGTTCAAGACCACCCAGTC
GTCCTTCACGAACTTCCACAAGGACTCCAACACCTCCCTTCCTGAAGCTG
CAGACAGATGGTGAAGGAAGACATGTGGAACCGTGTTATCACAGCAGATA
CGACGGGCAAGCACAGACCGCACGACCACGCTTTTGTCAAGGGTGGGCCG
CACTTCATGTTTGGGCGCTGCGAAGGAACACGAAACGCCCATGGGCTGGT
GGTCATCAATGTTTTTGGTGGCGTGAAGGGCTTAACGCTGTTCAAGACCA
CCCAGTCGTCCTTCACGAACTTCCACAAGGACTCCAACACCTCCCTTCCT
GAAGCTGCAGACAGACTGCTGGGAACTTGCATGGACGCAGAGTGGGCGTA
TATGATCTGCTCGCCATCGTTCTTGCAAGACCGCGCTCATATCATGGACA
TTCTGGTGGAAATATTCGCCGGACCTGCAGACAAGGGCGTGCCGAGCCCT
TCAGTGCAACACACGTGTTTCCAGATGGGATCTGAAATTCTGTCTGCTGT
TGATGGAATGTCAGAGGTTACCCTGTACATGCCGAATGTTCACAACTTGC
CGTTTGACCTAGGCAAATATGGCCTGGTCAACGCCGACCAAACCGATCTC
CCCCATATTTTTTATCCTGTGGATGAACCTCACGGGATTATCCAAGCTAC
CATCAAGCGCCCTATTTCTAAGCTTTAGACTGCTGGGAACTTGCATGGAC
GCAGAGTGGGCGTATATGATCTGCTCGCCATCGTTCTTGCAAGACCGCGC
TCATATCATGGACATTCTGGTGGAAATATTCGCCGGACCTGCAGACAAGG
GCGTGCCGAGCCCTTCAGTGCAACACACGTGTTTCCAGATGGGATCTGAA
ATTCTGTCTGCTGTTGATGGAATGTCAGAGGTTACCCTGTACATGCCGAA
TGTTCACAACTTGCCGTTTGACCTAGGCAAATATGGCCTGGTCAACGCCG
ACCAAACCGATCTCCCCCATATTTTTTATCCTGTGGATGAACCTCACGGG
ATTATCCAAGCTACCATCAAGCGCCCTATTTCTAAGCTTTAG
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