mRNA_S-dermatodea_contig10347.254.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10347.254.1 vs. uniprot
Match: D8LM50_ECTSI (Uricase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM50_ECTSI) HSP 1 Score: 343 bits (881), Expect = 8.910e-117 Identity = 166/217 (76.50%), Postives = 180/217 (82.95%), Query Frame = 1
Query: 1 YPQLVSRCRVMVKEDMWNRVITADTTGKHRPHDHAFVKGGPHFMFGRCEGTRNAHGLVVINVFGGVKGLTLFKTTQSSFTNFHKDSNTSLPEAADRLLGTCMDAEWAY-MICSPSFLQDRAHIMDILVEIFAGPADKGVPSPSVQHTCFQMGSEILSAVDGMSEVTLYMPNVHNLPFDLGKYGLVNADQTDLPHIFYPVDEPHGIIQATIKRPISKL 648
YP LV RCRVMVKED W RV TAD+TGK R HDHAF+K GPH++FGR EGTR G + I FGGVKGLTLFKTTQSSFTNFHKD+NTSLPEA DRLLGTCMD EW Y ++ SP F DRA I+D+LVE FAGPADKGV SPSVQ TCFQMGS +L+ V +SE T YMPNVHNLPFDL KYGLVNADQT LPHIFYPVDEPHGIIQAT+KRP SKL
Sbjct: 91 YPDLVHRCRVMVKEDTWKRVRTADSTGKTRDHDHAFLKAGPHYLFGRSEGTRQPCGRISIRAFGGVKGLTLFKTTQSSFTNFHKDNNTSLPEAEDRLLGTCMDGEWEYDVLRSPDFSGDRAKIIDVLVEQFAGPADKGVYSPSVQVTCFQMGSAVLATVPSVSECTFYMPNVHNLPFDLAKYGLVNADQTGLPHIFYPVDEPHGIIQATMKRPSSKL 307
BLAST of mRNA_S-dermatodea_contig10347.254.1 vs. uniprot
Match: A0A836C7Y1_9STRA (Uricase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Y1_9STRA) HSP 1 Score: 225 bits (574), Expect = 4.890e-71 Identity = 114/221 (51.58%), Postives = 146/221 (66.06%), Query Frame = 1
Query: 10 LVSRCRVMVKEDMWNRVITADTTGKHRPHDHAFVKGGPHFMFGRCEGTRNAHGLVVINVFGGVKGLTLFKTTQSSFTNFHKDSNTSLPEAADRLLGTCMDAEWAY--------MICSPSFLQDRAHIMDILVEIFAGPADKGVPSPSVQHTCFQMGSEILSAVDGMSEVTLYMPNVHNLPFDLGKYGLVNADQTDLPHIFYPVDEPHGIIQATIKRPISKL 648
LV+ CRV+VK+D+W RV D+ G H+HAF K GPH+ + R E R A + ++GG KG TL KTTQSSF +FHKD TSLP+A DRL+G+ D+EW Y + +F+ R I+D + + FAGPAD GVPS SVQ T +QMG +LS ++++TLYMPNVHN+PFDL K G+ N D T I YP+DEPHGIIQATI RP +KL
Sbjct: 30 LVTFCRVIVKQDIWERVQVPDSRGVVTEHNHAFKKVGPHYTYARVEAPRGAP----MRLWGGCKGYTLLKTTQSSFVDFHKDPYTSLPQATDRLMGSNFDSEWTYTPDTVAAAVSGRVNFVAIRDQILDTMTKTFAGPADVGVPSASVQVTLYQMGGAVLSIAPQVTDITLYMPNVHNMPFDLAKLGMSNTDHTGNIDILYPIDEPHGIIQATIVRPGAKL 246
BLAST of mRNA_S-dermatodea_contig10347.254.1 vs. uniprot
Match: W7TW56_9STRA (Uricase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TW56_9STRA) HSP 1 Score: 191 bits (485), Expect = 9.260e-57 Identity = 91/216 (42.13%), Postives = 137/216 (63.43%), Query Frame = 1
Query: 1 YPQLVSRCRVMVKEDMWNRVITADTTGKHRPHDHAFVKGGPHFMFGRCEGTRNAHGLVVINVFGGVKGLTLFKTTQSSFTNFHKDSNTSLPEAADRLLGTCMDAEWAYMICS----PSFLQDRAHIMDILVEIFAGPADKGVPSPSVQHTCFQMGSEILSAVDGMSEVTLYMPNVHNLPFDLGKYGLVNADQTDLPHIFYPVDEPHGIIQATIKRP 636
YP +V++ V + +D+W RV+ D+ G+ H+HAF+K GP + G VV++V G++ L L KTTQS F NFH+D +L + DRL+GT +D EW++ + P + ++D L++ FAGPADKGV S SVQ T + MG+ +L+ V G+ ++ LYMPN+HN+P DL K+ + N D + P IF P+D+PHG+I+A I+RP
Sbjct: 91 YPAIVTKVDVQLVKDLWTRVVNKDSHGRIAQHNHAFIKVGPQTTHTHIVAEK-VGGSVVVSVRSGIRSLILLKTTQSGFENFHRDEFRALGDTNDRLVGTSVDGEWSFSAATIASRPDYEALNKTVLDTLIDEFAGPADKGVYSVSVQQTLYDMGTGLLAKVPGVDKIELYMPNIHNIPVDLSKFRIENKDHSGKPDIFLPMDDPHGMIKAIIERP 305
BLAST of mRNA_S-dermatodea_contig10347.254.1 vs. uniprot
Match: A0A485L9Z9_9STRA (Uricase n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9Z9_9STRA) HSP 1 Score: 183 bits (465), Expect = 8.210e-55 Identity = 94/219 (42.92%), Postives = 134/219 (61.19%), Query Frame = 1
Query: 1 YPQLVSRCRVMVKEDMWNRVITADTTGKHRPHDHAFVKGGPHFMFGRCEGTRNAHGLVVINVFGGVKGLTLFKTTQSSFTNFHKDSNTSLPEAADRLLGTCMDAEWAYMICSPSFLQDRAHIMDILVEIFAGPADKGVPSPSVQHTCFQMGSEILSAVDGMSEVTLYMPNVHNLPFDLGKYGLVNADQTDLPH--IFYPVDEPHGIIQATIKR-PISKL 648
+P ++ +V + E W+R+I D+ G+ +PH HAFV+GG + E + G V +++ G+ GL + KTT S+F F KD T LPE DRLL T + AEW Y + + + A + IL+++FAGPAD GVPSP+VQ T F+MG +L + ++ +YMPN+HNLP +L +GL N PH IF P DEPHGII+AT+ R P S+L
Sbjct: 13 HPSVIQYAKVKLVEVQWDRIINKDSKGELKPHHHAFVQGGTESRYAIAEARLTSPGNVDVSLSAGLSGLRVLKTTNSAFEGFRKDQFTILPEVHDRLLATAVSAEWEYAHPNATSAE-AAQVRGILIDVFAGPADTGVPSPAVQWTLFKMGEAVLDRCPFVKKIHIYMPNIHNLPVNLKPFGLKNTH----PHGEIFLPTDEPHGIIEATLTRTPSSRL 226
BLAST of mRNA_S-dermatodea_contig10347.254.1 vs. uniprot
Match: A0A0N7L5S7_PLAHL (Uricase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L5S7_PLAHL) HSP 1 Score: 186 bits (471), Expect = 1.080e-54 Identity = 95/220 (43.18%), Postives = 131/220 (59.55%), Query Frame = 1
Query: 1 YPQLVSRCRVMVKEDMWNRVITADTTGKHRPHDHAFVKGGPHFMFGRCEGTRNAHGLVVINVFGGVKGLTLFKTTQSSFTNFHKDSNTSLPEAADRLLGTCMDAEWAYM--ICSPSFLQDRAHIMDILVEIFAGPADKGVPSPSVQHTCFQMGSEILSAVDGMSEVTLYMPNVHNLPFDLGKYGLVNADQTDLPH--IFYPVDEPHGIIQATIKRPISKL 648
+P++VS +V + E W R++ D+ G RPH HAFV P F ++ +G + V GGV GL KTTQS+F NF +D T+L +A DRL+ TC+ + W Y+ F A I ++L+E FAGPAD GVPSP+VQ T ++MG +L + E+T+ MPN+HN P DL ++G N PH +F P+DEPHGII ATI R +KL
Sbjct: 92 HPEIVSLAKVKLFEMPWERLVLPDSKGVMRPHHHAFVSASPGFSTATVTARKSKYGDPEVTVQGGVDGLKALKTTQSAFVNFLRDEFTTLEDAPDRLVSTCISSTWTYISETTRGDFATKAAVIKNVLLETFAGPADVGVPSPAVQFTLYKMGEAVLEKCSYVKEITISMPNIHNNPIDLSRFGCKNIH----PHGEVFLPIDEPHGIISATIVRSTAKL 307
BLAST of mRNA_S-dermatodea_contig10347.254.1 vs. uniprot
Match: H3GV00_PHYRM (Uricase n=21 Tax=Phytophthora TaxID=4783 RepID=H3GV00_PHYRM) HSP 1 Score: 185 bits (470), Expect = 1.530e-54 Identity = 90/220 (40.91%), Postives = 132/220 (60.00%), Query Frame = 1
Query: 1 YPQLVSRCRVMVKEDMWNRVITADTTGKHRPHDHAFVKGGPHFMFGRCEGTRNAHGLVVINVFGGVKGLTLFKTTQSSFTNFHKDSNTSLPEAADRLLGTCMDAEWAYM--ICSPSFLQDRAHIMDILVEIFAGPADKGVPSPSVQHTCFQMGSEILSAVDGMSEVTLYMPNVHNLPFDLGKYGLVNADQTDLPH--IFYPVDEPHGIIQATIKRPISKL 648
+P ++S +V + E W RV+ D+ G+ RPH HAFV G F +++HG + V GGV GL + KTTQS+F +F +D T+LP+ DRL+ TC+ + W+Y F+ A + ++L+E F+GPAD GVPSP+VQ T ++MG +L + ++ + MPN+HN P DL ++G N PH +F P DEPHGII AT+ R S+L
Sbjct: 92 HPDIISVAKVKLFETPWERVVVPDSKGQTRPHHHAFVSAGAGFSTAYVVARKSSHGAPEVTVQGGVDGLKVLKTTQSAFVDFFRDEYTTLPDVPDRLVSTCVTSTWSYTPGAIGGDFVARAAEVKNVLLETFSGPADVGVPSPAVQFTLYKMGEAVLERCPYVQDIKITMPNIHNNPIDLARFGCKNIH----PHGEVFLPTDEPHGIISATMVRSASRL 307
BLAST of mRNA_S-dermatodea_contig10347.254.1 vs. uniprot
Match: A0A5D6XUS0_9STRA (Uricase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUS0_9STRA) HSP 1 Score: 177 bits (449), Expect = 2.180e-51 Identity = 97/221 (43.89%), Postives = 132/221 (59.73%), Query Frame = 1
Query: 1 YPQLVSRCRVMVKEDMWNRVITADTTGKHRPHDHAFVKGGPHFMFGRCEGTRNAHG-LVVINVFGGVKGLTLFKTTQSSFTNFHKDSNTSLPEAADRLLGTCMDAEW--AYMICSPSFLQDRAHIMDILVEIFAGPADKGVPSPSVQHTCFQMGSEILSAVDGMSEVTLYMPNVHNLPFDLGKYGLVNADQTDLPH--IFYPVDEPHGIIQATIKRPISKL 648
+PQ+V +V + E W RV+TAD+TGK RPH HAFV + HG V+++ G+ G + KTTQSSF +F +D T+LP+ DRL+GT + A W A F RA + L++ FAGPAD GVPS +VQ T FQMG +L+ +++V++ MPNVHNLP D+ ++GL N PH +F P EPHGIIQAT+ R S+L
Sbjct: 91 HPQIVDVAKVKLFETHWERVVTADSTGKVRPHHHAFVGVDSGIATTSAVARKAPHGGEPVVSLSAGIDGWRVMKTTQSSFVDFFRDEYTTLPDVPDRLVGTVVKASWTVAPEALRSCFKTQRAQVKKTLLDAFAGPADVGVPSDAVQATLFQMGEAVLNKCPFVTDVSILMPNVHNLPVDVTRFGLKNLH----PHGEVFLPTSEPHGIIQATMVRATSRL 307
BLAST of mRNA_S-dermatodea_contig10347.254.1 vs. uniprot
Match: A0A8K1FI17_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FI17_PYTOL) HSP 1 Score: 175 bits (443), Expect = 1.680e-50 Identity = 92/223 (41.26%), Postives = 132/223 (59.19%), Query Frame = 1
Query: 1 YPQLVSRCRVMVKEDMWNRVITADTTGKHRPHDHAFVKGGPHFMFGRCEGTRNAHGLVVINVFGGVKGLTLFKTTQSSFTNFHKDSNTSLPEAADRLLGTCMDAEWAYM-----ICSPSFLQDRAHIMDILVEIFAGPADKGVPSPSVQHTCFQMGSEILSAVDGMSEVTLYMPNVHNLPFDLGKYGLVNADQTDLPH--IFYPVDEPHGIIQATIKRPISKL 648
+P + +V + E W R++T D+ G +PH HAFV G + AHG I+V G++GL + KT++SSF +F +D+ T+LP+ DRL+GT + A W Y +C F + I +L++ FAGP+D GV SP+VQ T ++MG +L + ++T+ MPNVHNLP DL K+GL N PH +F P DEPHGII+AT+ R SKL
Sbjct: 91 HPTKIDVAKVKIFETKWVRLVTPDSKGTRKPHHHAFVGDGSGTATTYVIARKTAHGEPQISVQSGIEGLRVLKTSKSSFVDFFRDAYTTLPDVPDRLVGTVVTATWNYTSEATRVC---FQKQADEIKRVLLDTFAGPSDAGVDSPAVQFTLYKMGEAVLDQCPSVKDITITMPNVHNLPVDLTKFGLKNIH----PHGEVFLPTDEPHGIIRATMVRATSKL 306
BLAST of mRNA_S-dermatodea_contig10347.254.1 vs. uniprot
Match: K3W9W7_GLOUD (Uricase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W9W7_GLOUD) HSP 1 Score: 171 bits (433), Expect = 5.450e-49 Identity = 94/224 (41.96%), Postives = 131/224 (58.48%), Query Frame = 1
Query: 1 YPQLVSRCRVMVKEDMWNRVITADTTGKHRPHDHAFVKGGPHFMFGRCEGTRNAHG-LVVINVFGGVKGLTLFKTTQSSFTNFHKDSNTSLPEAADRLLGTCMDAEW-----AYMICSPSFLQDRAHIMDILVEIFAGPADKGVPSPSVQHTCFQMGSEILSAVDGMSEVTLYMPNVHNLPFDLGKYGLVNADQTDLPH--IFYPVDEPHGIIQATIKRPISKL 648
+PQ++ +V + E W RV+ AD+TGK RPH HAFV + HG +I++ G+ G + KTTQSSF +F +D T+LP+ DRL+GT + A W A+ C F R + +L++ FAGPAD GVPS +VQ T +QMG +L+ + ++T+ MPNVHNLP DL ++GL N PH +F P EPHGIIQA + R S+L
Sbjct: 91 HPQIIDVAKVKLFETHWERVVNADSTGKVRPHAHAFVGVDSGISTTYAVARKAPHGGEPMISLSSGIDGWRVMKTTQSSFMDFFRDEYTTLPDTPDRLVGTVVKATWNFTSEAFRSC---FKAQREQVKRVLLDTFAGPADVGVPSDAVQATLYQMGEAVLNECPFVKDITILMPNVHNLPVDLTRFGLKNIH----PHGEVFLPTSEPHGIIQAKMVRSTSRL 307
BLAST of mRNA_S-dermatodea_contig10347.254.1 vs. uniprot
Match: A0A662WET4_9STRA (Uricase n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A662WET4_9STRA) HSP 1 Score: 168 bits (426), Expect = 8.110e-48 Identity = 90/217 (41.47%), Postives = 123/217 (56.68%), Query Frame = 1
Query: 13 VSRCRVMVKEDMWNRVITADTTGKHRPHDHAFVKGGPHFMFGRCEGTRN-AHGLVVINVFGGVKGLTLFKTTQSSFTNFHKDSNTSLPEAADRLLGTCMDAEWAYM--ICSPSFLQDRAHIMDILVEIFAGPADKGVPSPSVQHTCFQMGSEILSAVDGMSEVTLYMPNVHNLPFDLGKYGLVNADQTDLPH--IFYPVDEPHGIIQATIKRPISKL 648
+S +V + E W R++T D+ GK RPH HAFV F ++ + G + V GGV GL + KTTQS+F F KD T+LPE DRL+ T + + W Y F A + +L+E FAGP+D GVPSP+VQ T ++MG +L + ++ + MPN+HN P DL ++G N PH +F P DEPHGII AT+ R SKL
Sbjct: 106 ISVAKVKLFETPWERMVTPDSNGKMRPHHHAFVSASAGFSTAYVVARKSPSGGAPQVTVQGGVDGLRVLKTTQSAFVKFFKDEYTTLPEVPDRLVSTVVASTWNYTPGAVGGDFTAKAAEVKRVLLETFAGPSDVGVPSPAVQFTLYKMGEAVLEQCPYVKDIKITMPNIHNNPIDLTRFGCKNIH----PHGEVFLPTDEPHGIISATMVRSASKL 318 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10347.254.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10347.254.1 >prot_S-dermatodea_contig10347.254.1 ID=prot_S-dermatodea_contig10347.254.1|Name=mRNA_S-dermatodea_contig10347.254.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=207bp MVKEDMWNRVITADTTGKHRPHDHAFVKGGPHFMFGRCEGTRNAHGLVVIback to top mRNA from alignment at S-dermatodea_contig10347:6433..7822+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10347.254.1 ID=mRNA_S-dermatodea_contig10347.254.1|Name=mRNA_S-dermatodea_contig10347.254.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1390bp|location=Sequence derived from alignment at S-dermatodea_contig10347:6433..7822+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10347:6433..7822+ >mRNA_S-dermatodea_contig10347.254.1 ID=mRNA_S-dermatodea_contig10347.254.1|Name=mRNA_S-dermatodea_contig10347.254.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1242bp|location=Sequence derived from alignment at S-dermatodea_contig10347:6433..7822+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |