mRNA_S-dermatodea_contig1029.218.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig1029.218.1
Unique NamemRNA_S-dermatodea_contig1029.218.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig1029.218.1 vs. uniprot
Match: D7FUK9_ECTSI (Sterol or diacylglycerol O-acyltransferase, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUK9_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 2.810e-54
Identity = 126/338 (37.28%), Postives = 174/338 (51.48%), Query Frame = 3
Query:   21 ARRPRRLMRAASELFHAGLCFLAFHASLSALFAPALRVIARASFSADASEGTEQEANTSDWVDLDGWAMIAADGNGW--WLPGE---------------GRWLDVGVAVVISMVVCSPMVHFMVFYGFWHCLCLGLAELCGYPDRNFYGPWWLVTDDPKALFRLWSFPVHRWLYCCIYRPVLDLAPRS---CSSTKNGDGSNGIVNNDDWIG--RKWWKLMALLAVFSVSGLFHEAILFVGMRKTFWPFQTVCLIWSAVHIYRWDYSYPV--LSYISETDGDGADATTALSSTARPLLAKRQVKLGSEWRGWGAVVFFMATCVPFPVVLEVLAWQWWR 962
            ARR  R +RAASE FHA L FL  H  + ++ AP+LR+     FSA +    E  A  + W +L+     AA G GW  W  G                G+ + +G  + +  VV S + HFMVFY FWHC+CLG+AEL G+PDRN YG WWL+ D+P+   R+WS PVHRWL  C++ P+L+L   S      TK+   +       +  G   KW  + A+LA F VSG+FHEA++++ MR T WPF T  L    V +  WD  +P+  L   SE++G     T  LS        K+ V+     RG  +   F  +      + +  AW WWR
Sbjct:  205 ARRRSRPLRAASEFFHAVLTFLCAHCVVGSILAPSLRLF----FSAVSPGWVEGAA--AGWAELE-----AAGGAGWPSWTAGSALLAGGDKEDSGTRLGQLVALGCFLWMLFVVSSAL-HFMVFYAFWHCICLGMAELWGFPDRNLYGCWWLLFDEPRDFLRMWSTPVHRWLSTCVHWPMLELCSTSDEGVDGTKSPPSAELSTATAEVAGDPSKWTWVPAVLATFVVSGVFHEAVVYIAMRGTCWPFNTFLLCVGGVLVIFWDIVFPLPDLKPSSESEGGSPPQTATLSPRNEGGAGKKVVRAYGH-RGRMSAAAFCVSVQLSAFIADCAAWLWWR 529          
BLAST of mRNA_S-dermatodea_contig1029.218.1 vs. uniprot
Match: D7FQV8_ECTSI (Diacylglycerol O-acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV8_ECTSI)

HSP 1 Score: 204 bits (518), Expect = 7.610e-54
Identity = 128/343 (37.32%), Postives = 169/343 (49.27%), Query Frame = 3
Query:    6 FLQRGARRPRRLMRAASELFHAGLCFLAFHASLSALFAPALRVIARASFSADASEGTEQEANTSDWVDLDGWAMIA-ADGNGWWLPGEGR-----------------------W-----------LDVGVAVVISMVVCSPMVHFMVFYGFWHCLCLGLAELCGYPDRNFYGPWWLVTDDPKALFRLWSFPVHRWLYCCIYRPVLDLAPRSC----------------SSTKNGDGSNGIVNN-----------------DDWIGRKWWKLMALLAVFSVSGLFHEAILFVGMRKTFWPFQTVCLIWSAVHIYRWDYSYPVLSYISETDGDGADATTALSSTA 830
            +L+ GARRP R+  AASE  HAGL ++A H + SALFAPALRV+A A  S             + W D + WA +   DG+GWWL    R                       W           L V +A  + + V SPM+HF++FY F+H +CLG AEL GYPDRN YGPWWLV DD +  FRLWS PVHRWL   + RP++++  R                  ++  N  GSNG+ +                  D  I  +WW L +++  F VSG+ HEA+ FV MR+T WPF T  L  +A     WD  +PV++  S T G       A +S A
Sbjct:  280 YLKSGARRPPRVAAAASEFLHAGLTYVAVHVACSALFAPALRVLAEALHS----------GGVAGWADEEDWAELRRTDGSGWWLHDSSRSIGSLFASGGGSCVGGGVGCVPGWTFADDGTGHPGLTVAIAACLGVFVFSPMMHFLMFYAFFHSVCLGCAELYGYPDRNTYGPWWLVVDDVRDYFRLWSAPVHRWLSESVQRPMIEVGQREALRHRRRRVAREEDKPPATNGNSGGSNGVHDYRPKGTSSTTGGKARHGADAGIVTRWW-LASVVCSFLVSGVVHEAVGFVAMRRTVWPFSTFFLAVTASMAPFWDTLFPVVADTS-TPGTRPTGRRAFTSIA 610          
BLAST of mRNA_S-dermatodea_contig1029.218.1 vs. uniprot
Match: D7FQW2_ECTSI (Sterol or diacylglycerol O-acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW2_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 1.630e-52
Identity = 132/353 (37.39%), Postives = 168/353 (47.59%), Query Frame = 3
Query:    6 FLQRGARRPRRLMRAASELFHAGLCFLAFHASLSALFAPALRVIARASFS-------------ADASE--------------GTEQEANTSDWVDLDGWA----MIAADGNGWW-----LPGEGR-----------------------WLDVGVAVVISMVVCSPMVHFMVFYGFWHCLCLGLAELCGYPDRNFYGPWWLVTDDPKALFRLWSFPVHRWLYCCIYRPVLDLAPRSCSSTKNGDGSNGIVNN-DDWIGRK---------------------------------WWKLMALLAVFSVSGLFHEAILFVGMRKTFWPFQTVCLIWSAVHIYRWDYSYPVLSYISET 785
            FL++ ARR     RA SE  HA L F+A HA+ SA FAP +RV+A A FS             A AS+              G+     T  WVD  GWA    +  A G+G W     L G G                        W  +  A  ++M+V SPMVHFM FYGFWHC+CLG AEL GYPDRNFYGPWWL+ ++P  ++RLWS PVHRW+  CIYRPV+    ++ + ++ G    G+       + RK                                 W +L+AL + F  S L HEA+ FV MR+T WP  T  L+ S   I  WD  YPV S ISE+
Sbjct:  283 FLRKHARRAPCPGRAFSEFSHAVLVFVALHAACSAFFAPVMRVVAAAVFSTPSPSLVGESAQAALASDFRGCGSGDGEHTCGGSPFNGATIGWVDCVGWAGAEGIHTAGGSGGWFFSLLLDGGGPETAAISYFESLFCGGAGGAGLAGWWGIAAASALAMLVFSPMVHFMAFYGFWHCVCLGCAELWGYPDRNFYGPWWLLAEEPDTMYRLWSTPVHRWVSSCIYRPVV--GHKNAAFSQPGRSGGGVRRGLAGTLCRKSEEXXXXXXXXXXXXXXXXXXXXXXXQTQRRWTWRRLLALTSAFLFSSLVHEAVTFVAMRRTCWPVSTFSLVLSIFVISGWDAMYPVRSIISES 633          
BLAST of mRNA_S-dermatodea_contig1029.218.1 vs. uniprot
Match: A0A6H5J9L7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9L7_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 2.220e-51
Identity = 130/364 (35.71%), Postives = 164/364 (45.05%), Query Frame = 3
Query:    6 FLQRGARRPRRLMRAASELFHAGLCFLAFHASLSALFAPALRVIARASFSADASEGTEQEANTS------------------------------DWVDLDGWA-----MIAADGNGWW----LPGEGR-----------------------WLDVGVAVVISMVVCSPMVHFMVFYGFWHCLCLGLAELCGYPDRNFYGPWWLVTDDPKALFRLWSFPVHRWLYCCIYRPVLDLAPRSCSSTKNGDGSNGIVNN----------------------------------------DDWIGRKW-WK-LMALLAVFSVSGLFHEAILFVGMRKTFWPFQTVCLIWSAVHIYRWDYSYPVLSYISET 785
            FL+  ARR  R  RA SE  HA L F+A HA+ SA FAP +RV+A A FS  +     + A+ +                               WVD  GWA       A    GW+    L G G                        W  +  A  ++M+V SPMVHFM FYGFWHC+CLG AEL GYPDRNFYGPWWL+ ++P  ++RLWS PVHRW+  CIYRP++    +S +  + G  S G+                                                R+W W+ LMAL + F  S L HEA+ FV MR+T WP  T  L+ S   I  WD  YPV S ISE+
Sbjct:  279 FLRERARRAPRPGRAFSEFSHAVLVFVALHAACSAFFAPVMRVLASAVFSPPSPSLAAESAHEALACDFRGGSSGGSGGGEYTCGGLPSIGAMIGWVDCVGWAGAEGIHTAGRSGGWFFSLLLDGGGSETAVASYFESLFCGGAGGAGLAGWWAIAAASALAMLVFSPMVHFMAFYGFWHCVCLGCAELWGYPDRNFYGPWWLLAEEPDTMYRLWSTPVHRWVSSCIYRPIV--GHKSAAIPQPGCSSGGVRRGLAGTSCREPEEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRWTWRRLMALTSAFLFSSLVHEAVTFVAMRRTCWPVSTFSLVLSIFVISGWDAMYPVRSIISES 640          
BLAST of mRNA_S-dermatodea_contig1029.218.1 vs. uniprot
Match: A0A6H5KXI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXI3_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 3.590e-35
Identity = 94/268 (35.07%), Postives = 120/268 (44.78%), Query Frame = 3
Query:    6 FLQRGARRPRRLMRAASELFHAGLCFLAFHASLSALFAPALRVIARASFSADASEGTEQEANTSDWVDLDGWAMIA-ADGNGWWL---------------------------------PGEGR-WLDVGVAVVISMVVCSPMVHFMVFYGFWHCLCLGLAELCGYPDRNFYG----------------------------PWWLVTDDPKALFRLWSFPVHRWLYCCIYRPVLDLAPRSC----------------SSTKNGDGSNGI 572
            +L  GARRP R+  AASE  HAGL ++A H + SALFAPALRV+A          G       + W D + WA +   DG+GWWL                                  G G   L V +A  + + V SPM+HF++FY F+H +CLG AEL GYPDRN YG                            PWWLV DD +  FRLWS PVHRWL   + RP++++  R                   +  N  GSNG+
Sbjct:  279 YLASGARRPPRVAAAASEFLHAGLTYIAVHVACSALFAPALRVLA----------GVLHSGGVAGWADEEDWAELRRTDGSGWWLYDSSGSLGSLFASGGGGCVHGGVGCGPGWTFSDDGTGHPGLTVAIAACLGVFVFSPMMHFLMFYAFFHSVCLGCAELYGYPDRNTYGELSFSLVGDRFTPSAGLEGQALRHDSAGPWWLVVDDVRDYFRLWSAPVHRWLSESVQRPMIEVGQREALRRXXXXXXXXXXXXXXTNGNSGGSNGV 536          
BLAST of mRNA_S-dermatodea_contig1029.218.1 vs. uniprot
Match: A0A512UGP0_9ASCO (O-acyltransferase n=1 Tax=Metschnikowia sp. JCM 33374 TaxID=2562755 RepID=A0A512UGP0_9ASCO)

HSP 1 Score: 61.2 bits (147), Expect = 3.210e-6
Identity = 35/126 (27.78%), Postives = 54/126 (42.86%), Query Frame = 3
Query:  297 VISMVVCSPMVHFMVFYGFWHCLCLGLAELCGYPDRNFYGPWWLVTDDPKALFRLWSFPVHRWLYCCIYRPVLDLAPRSCSSTKNGDGSNGIVNNDDWIGRKWWKLMALLAVFSVSGLFHEAILFV 674
            +I ++    M +   FY  W  +   +AEL G+ DR+FYGPWW  TD  +   R W+ PVH +L+  +Y   +     S                         KL A    F +S + HE +++V
Sbjct:  422 LIDLIPPLTMEYMFQFYLIWDVILSAIAELSGFADRDFYGPWWSCTDWSQ-FSRYWNKPVHVFLHRHVYHSSISALSLS-------------------------KLAAAFLTFFISSVVHELVMYV 521          
BLAST of mRNA_S-dermatodea_contig1029.218.1 vs. uniprot
Match: A0A023B8W5_GRENI (O-acyltransferase n=1 Tax=Gregarina niphandrodes TaxID=110365 RepID=A0A023B8W5_GRENI)

HSP 1 Score: 59.7 bits (143), Expect = 9.670e-6
Identity = 48/150 (32.00%), Postives = 66/150 (44.00%), Query Frame = 3
Query:  318 SPM--VHFMVFYGFWHCLCLGLAELCGYPDRNFYGPWWLVTDDPKALFRLWSFPVHRWLYCCIYRPVLDLAPRSCSSTKNGD--GSNGIVNNDDWIGRKW-WKLMALLAVFSVSGLFHEAIL-----FV-GMRKTFWPFQTVCLIWSAVH 734
            SP+  +  + FY  + C+   LAE+ GYPDR FY  +W  T   +   R W+ PVH +LY   YRP+        S   + D  G +G       +GR    + +A L  F  S + HE  L     FV G   T   FQ   +  S  H
Sbjct:  381 SPLFIMDLLFFYMMFECILNMLAEVTGYPDREFYEDFWNCTTW-EEFSRKWNRPVHLFLYSHCYRPIYSFVKSVWSMYHHADSTGQSGGGRTARRVGRVLKGQFVASLLTFLFSAVIHEFFLTATLGFVAGWMFTLMMFQIPLIALSKYH 529          
BLAST of mRNA_S-dermatodea_contig1029.218.1 vs. uniprot
Match: I7AGE5_ENCRO (Diacylglycerol O-acyltransferase n=1 Tax=Encephalitozoon romaleae (strain SJ-2008) TaxID=1178016 RepID=I7AGE5_ENCRO)

HSP 1 Score: 58.5 bits (140), Expect = 1.630e-5
Identity = 39/148 (26.35%), Postives = 65/148 (43.92%), Query Frame = 3
Query:  297 VISMVVCSPMVHFMVFYGFWHCLCLGLAELCGYPDRNFYGPWWLVTDDPKALFRLWSFPVHRWLYCCIYRPVLDLAPRSCSSTKNGDGSNGIVNNDDWIGRKWWKLMALLAVFSVSGLFHEAILFVGMRK-TFWPFQTVCLIWSAVHI 737
            +I+  + + ++  + FY  ++C    +A L  + D  FY  WW  +   +  + LW+ PV+ W    IY P++    R  S  K G                       L VF+VSGL HE +  + ++K T W F T+ L    +H+
Sbjct:  237 IINFSISTIILFLIFFYAVFYCFLDAVANLTLFYDSCFYQEWWNASSA-REFWALWNRPVYLWFKRHIYAPLVS---RGMSKEKAG-----------------------LVVFTVSGLIHEYVASISIKKITGWFFITMLLQVPLIHV 357          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1029.218.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FUK9_ECTSI2.810e-5437.28Sterol or diacylglycerol O-acyltransferase, partia... [more]
D7FQV8_ECTSI7.610e-5437.32Diacylglycerol O-acyltransferase n=1 Tax=Ectocarpu... [more]
D7FQW2_ECTSI1.630e-5237.39Sterol or diacylglycerol O-acyltransferase n=1 Tax... [more]
A0A6H5J9L7_9PHAE2.220e-5135.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXI3_9PHAE3.590e-3535.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A512UGP0_9ASCO3.210e-627.78O-acyltransferase n=1 Tax=Metschnikowia sp. JCM 33... [more]
A0A023B8W5_GRENI9.670e-632.00O-acyltransferase n=1 Tax=Gregarina niphandrodes T... [more]
I7AGE5_ENCRO1.630e-526.35Diacylglycerol O-acyltransferase n=1 Tax=Encephali... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1029contigS-dermatodea_contig1029:3243..5567 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeMammalia
Seed ortholog score66.6
Seed ortholog evalue2.3e-08
Seed eggNOG ortholog9361.ENSDNOP00000026417
Preferred nameSOAT1
KEGG rclassRC00004,RC00055
KEGG koko:K00637
KEGG ReactionR01461
KEGG Pathwayko00100,ko04979,map00100,map04979
GOsGO:0000062,GO:0000166,GO:0003674,GO:0003824,GO:0004772,GO:0005488,GO:0005496,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006066,GO:0006629,GO:0006810,GO:0006869,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008289,GO:0008374,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010556,GO:0010557,GO:0010559,GO:0010560,GO:0010604,GO:0010742,GO:0010876,GO:0010878,GO:0012505,GO:0015485,GO:0015850,GO:0015918,GO:0016020,GO:0016043,GO:0016125,GO:0016740,GO:0016746,GO:0016747,GO:0017076,GO:0019222,GO:0019915,GO:0022607,GO:0030154,GO:0030258,GO:0030301,GO:0030554,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031984,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032934,GO:0033036,GO:0033218,GO:0033344,GO:0034377,GO:0034379,GO:0034381,GO:0034383,GO:0034433,GO:0034434,GO:0034435,GO:0034736,GO:0036094,GO:0042175,GO:0042592,GO:0042632,GO:0042984,GO:0042986,GO:0043062,GO:0043167,GO:0043168,GO:0043178,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0048037,GO:0048518,GO:0048522,GO:0048869,GO:0048878,GO:0050662,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051235,GO:0051246,GO:0051247,GO:0055088,GO:0055092,GO:0060255,GO:0065003,GO:0065005,GO:0065007,GO:0065008,GO:0071702,GO:0071704,GO:0071825,GO:0071827,GO:0071840,GO:0080090,GO:0090077,GO:0097006,GO:0097159,GO:0097367,GO:0098827,GO:1901265,GO:1901360,GO:1901363,GO:1901567,GO:1901615,GO:1901681,GO:1902652,GO:1903018,GO:1903020,GO:2000112
EggNOG free text desc.sterol O-acyltransferase 1
EggNOG OGs38EBW@33154,3BDG1@33208,3CRIC@33213,3J383@40674,48546@7711,492S1@7742,COG5056@1,KOG0380@2759
EC2.3.1.26
COG Functional cat.I
Best tax levelMammalia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categorysignal peptide
Exons2
Model size1613
Cds size936
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1029.218.1prot_S-dermatodea_contig1029.218.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig1029 3284..4931 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924149.7828493-UTR-S-dermatodea_contig1029:3242..32831622924149.7828493-UTR-S-dermatodea_contig1029:3242..3283Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1029 3243..3283 +
1694079051.560877-UTR-S-dermatodea_contig1029:3242..32831694079051.560877-UTR-S-dermatodea_contig1029:3242..3283Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1029 3243..3283 +
1622924149.811929-UTR-S-dermatodea_contig1029:4931..55671622924149.811929-UTR-S-dermatodea_contig1029:4931..5567Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1029 4932..5567 +
1694079051.6053956-UTR-S-dermatodea_contig1029:4931..55671694079051.6053956-UTR-S-dermatodea_contig1029:4931..5567Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1029 4932..5567 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924149.7926242-CDS-S-dermatodea_contig1029:3283..36561622924149.7926242-CDS-S-dermatodea_contig1029:3283..3656Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1029 3284..3656 +
1694079051.5829675-CDS-S-dermatodea_contig1029:3283..36561694079051.5829675-CDS-S-dermatodea_contig1029:3283..3656Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1029 3284..3656 +
1622924149.8040438-CDS-S-dermatodea_contig1029:4368..49311622924149.8040438-CDS-S-dermatodea_contig1029:4368..4931Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1029 4369..4931 +
1694079051.5963526-CDS-S-dermatodea_contig1029:4368..49311694079051.5963526-CDS-S-dermatodea_contig1029:4368..4931Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1029 4369..4931 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig1029.218.1

>prot_S-dermatodea_contig1029.218.1 ID=prot_S-dermatodea_contig1029.218.1|Name=mRNA_S-dermatodea_contig1029.218.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=312bp
MRAASELFHAGLCFLAFHASLSALFAPALRVIARASFSADASEGTEQEAN
TSDWVDLDGWAMIAADGNGWWLPGEGRWLDVGVAVVISMVVCSPMVHFMV
FYGFWHCLCLGLAELCGYPDRNFYGPWWLVTDDPKALFRLWSFPVHRWLY
CCIYRPVLDLAPRSCSSTKNGDGSNGIVNNDDWIGRKWWKLMALLAVFSV
SGLFHEAILFVGMRKTFWPFQTVCLIWSAVHIYRWDYSYPVLSYISETDG
DGADATTALSSTARPLLAKRQVKLGSEWRGWGAVVFFMATCVPFPVVLEV
LAWQWWRLEMR*
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mRNA from alignment at S-dermatodea_contig1029:3243..5567+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig1029.218.1 ID=mRNA_S-dermatodea_contig1029.218.1|Name=mRNA_S-dermatodea_contig1029.218.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2325bp|location=Sequence derived from alignment at S-dermatodea_contig1029:3243..5567+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CAGCGTTTTTACAACGCGGCGCCCGGCGACCCCGTCGCCTTATGCGTGCC GCCTCTGAATTATTTCACGCTGGACTTTGCTTCCTGGCTTTCCATGCGTC ACTATCGGCACTCTTTGCGCCCGCGCTGCGTGTCATCGCGCGCGCCTCAT TTTCCGCCGACGCCAGCGAAGGGACAGAACAAGAGGCGAACACGTCGGAC TGGGTGGATCTTGATGGTTGGGCGATGATCGCTGCCGACGGAAACGGCTG GTGGTTGCCGGGCGAAGGGCGGTGGCTGGACGTTGGAGTGGCCGTGGTGA TTTCGATGGTGGTATGCTCGCCCATGGTGCACTTCATGGTGTTCTACGGG TTTTGGCATTGCTTGTGCCTCGGCTTGGCGGAGCTTTGTGGTTATCCTGA TCGCAACTTTTACGGTGAGGATTTGATGAGGAGTACTTAAAATATTTACG TTTGCCGTGTCCTTCTGTAGACATACAACGCTTTTTACCCTGGAGCTTAA GCTCTGTGCAAATTAGTGTCGGTAGAGGTATGCGCTTCTAGCTTTCGAAG GCGATGGGTCGTCTTGATTCGTCTCTCGGCAACTCCATTTGTCGACGTCA GGGCTGAAGGTGTCTCGTAGCACGTTTTCGTCTCTTCGTTCTTAGGCATT TTTGTCTTTCGCCAAGGTGCCGGCAGCCTTGCCGAGCAAGCGTACCTTTT TGTCCCAGGCGGTATCTCAAAATCTTGAAGAGAATGGGGCCTGAACAAGA GGTACTAGGACCTTTACCTCTGGATGCATAATTCTAGCGGACGTTTGGAT TATCCATGTGCCCGTGCAGTGAGACGAAGCCCCTACTTGGGTCTCCAGTG CTGTAGTACGTTACAGTCGGTACATGTCTCTGGCGGCAGCGTTGCTTGAA GCTCCAAAAGCAAATGTTCGGAGAACATCGAAGTGTTGGCACAATTAAGA TGGCGGTGCGGTTTTCCAACCCTTCCTACATGAATCTTAGCCCTATGACG ATATCCCTGCACTCCAAGCCATAAGCATGGTGTTTGAGCATTGTGAATAT CCTACGTCGTCCTCGCGGGATTGAAGACGCTTGCAAACGTGTTTTTTTCG ATGTATGACTCTCGGTGTGCGTGCAGGACCTTGGTGGCTCGTGACCGACG ACCCCAAAGCGCTGTTCCGCCTGTGGTCATTCCCAGTACACCGATGGCTG TACTGCTGCATCTATAGGCCCGTGCTTGACTTGGCGCCTCGTAGCTGCAG CAGCACAAAGAACGGCGATGGCAGCAACGGTATCGTCAACAACGACGATT GGATTGGGCGCAAGTGGTGGAAGCTGATGGCCCTATTGGCCGTGTTCTCC GTCTCCGGCCTTTTCCACGAGGCGATCCTTTTCGTCGGGATGCGAAAAAC GTTCTGGCCCTTCCAGACCGTCTGCCTCATCTGGAGCGCGGTCCACATAT ATCGGTGGGACTACAGCTACCCCGTCCTGTCCTACATTTCCGAGACTGAT GGGGACGGTGCAGATGCCACCACCGCCCTGTCATCGACAGCCCGGCCTCT TCTTGCGAAGCGTCAAGTAAAACTCGGAAGCGAGTGGCGGGGCTGGGGGG CTGTTGTGTTTTTTATGGCAACCTGTGTGCCATTCCCTGTCGTCCTTGAG GTTTTGGCTTGGCAGTGGTGGCGCCTAGAAATGAGGTAATCTGATTCAAT AATGAGGAGCTCCAACACCAAGCTTCAGGTTGCGCCAATGCTTCAGGGTG GGCATTGCGCGTGAGCTAAGGACACTTAGAGGAACTGATGCGGTGTTTTT ATGACCGGGGAAGGGTAAATTCCAGGGCTCTACATGTGACCGGCGGTTAC ACACGTCTTTTCACATGATCAGCACCAAAACCGGTTGGCGGTAGGGTAGC CTAGAGTGAAATGTTTACATTTGCCAACCGGTTGGCGGTACTGTAGGGTA CTGTGAGATTTTTCGCCGGTTAGTGCTGGTTCGGTACTGTCTACTACAAC CGGCCATGTTAAAAGCCTGTGTAATTTCACGTGTCGTGAATTTCACAGGA CCAGCGCCAAAACCGGTTCACGGTAGGGTAGTGTGCGAGTTTTGGTCGGT GCTGGTAAGGTATTGTGAGAAAAAAGCGGTCACGTGTAGAGCCCTGGTAA ATTTATTTGCAGATAGAGTTAATTCGCAATGAACCCTGCCGCTCTAGGTT CTTTATCAGGATACCTACGTTATGACGTGCCAGATGCTTTGCGGCGAGGC GCACGTCATGCCCACTCCTCTCTGAGACATGAGGCAAACGATGCATTTTA CCTTTATCGCCGAAGTAATCCTTGC
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Coding sequence (CDS) from alignment at S-dermatodea_contig1029:3243..5567+

>mRNA_S-dermatodea_contig1029.218.1 ID=mRNA_S-dermatodea_contig1029.218.1|Name=mRNA_S-dermatodea_contig1029.218.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1872bp|location=Sequence derived from alignment at S-dermatodea_contig1029:3243..5567+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCGTGCCGCCTCTGAATTATTTCACGCTGGACTTTGCTTCCTGGCTTT
CCATGCGTCACTATCGGCACTCTTTGCGCCCGCGCTGCGTGTCATCGCGC
GCGCCTCATTTTCCGCCGACGCCAGCGAAGGGACAGAACAAGAGGCGAAC
ACGTCGGACTGGGTGGATCTTGATGGTTGGGCGATGATCGCTGCCGACGG
AAACGGCTGGTGGTTGCCGGGCGAAGGGCGGTGGCTGGACGTTGGAGTGG
CCGTGGTGATTTCGATGGTGGTATGCTCGCCCATGGTGCACTTCATGGTG
TTCTACGGGTTTTGGCATTGCTTGTGCCTCGGCTTGGCGGAGCTTTGTGG
TTATCCTGATCGCAACTTTTACGATGCGTGCCGCCTCTGAATTATTTCAC
GCTGGACTTTGCTTCCTGGCTTTCCATGCGTCACTATCGGCACTCTTTGC
GCCCGCGCTGCGTGTCATCGCGCGCGCCTCATTTTCCGCCGACGCCAGCG
AAGGGACAGAACAAGAGGCGAACACGTCGGACTGGGTGGATCTTGATGGT
TGGGCGATGATCGCTGCCGACGGAAACGGCTGGTGGTTGCCGGGCGAAGG
GCGGTGGCTGGACGTTGGAGTGGCCGTGGTGATTTCGATGGTGGTATGCT
CGCCCATGGTGCACTTCATGGTGTTCTACGGGTTTTGGCATTGCTTGTGC
CTCGGCTTGGCGGAGCTTTGTGGTTATCCTGATCGCAACTTTTACGGACC
TTGGTGGCTCGTGACCGACGACCCCAAAGCGCTGTTCCGCCTGTGGTCAT
TCCCAGTACACCGATGGCTGTACTGCTGCATCTATAGGCCCGTGCTTGAC
TTGGCGCCTCGTAGCTGCAGCAGCACAAAGAACGGCGATGGCAGCAACGG
TATCGTCAACAACGACGATTGGATTGGGCGCAAGTGGTGGAAGCTGATGG
CCCTATTGGCCGTGTTCTCCGTCTCCGGCCTTTTCCACGAGGCGATCCTT
TTCGTCGGGATGCGAAAAACGTTCTGGCCCTTCCAGACCGTCTGCCTCAT
CTGGAGCGCGGTCCACATATATCGGTGGGACTACAGCTACCCCGTCCTGT
CCTACATTTCCGAGACTGATGGGGACGGTGCAGATGCCACCACCGCCCTG
TCATCGACAGCCCGGCCTCTTCTTGCGAAGCGTCAAGTAAAACTCGGAAG
CGAGTGGCGGGGCTGGGGGGCTGTTGTGTTTTTTATGGCAACCTGTGTGC
CATTCCCTGTCGTCCTTGAGGTTTTGGCTTGGCAGTGGTGGCGCCTAGAA
ATGAGGTAAGACCTTGGTGGCTCGTGACCGACGACCCCAAAGCGCTGTTC
CGCCTGTGGTCATTCCCAGTACACCGATGGCTGTACTGCTGCATCTATAG
GCCCGTGCTTGACTTGGCGCCTCGTAGCTGCAGCAGCACAAAGAACGGCG
ATGGCAGCAACGGTATCGTCAACAACGACGATTGGATTGGGCGCAAGTGG
TGGAAGCTGATGGCCCTATTGGCCGTGTTCTCCGTCTCCGGCCTTTTCCA
CGAGGCGATCCTTTTCGTCGGGATGCGAAAAACGTTCTGGCCCTTCCAGA
CCGTCTGCCTCATCTGGAGCGCGGTCCACATATATCGGTGGGACTACAGC
TACCCCGTCCTGTCCTACATTTCCGAGACTGATGGGGACGGTGCAGATGC
CACCACCGCCCTGTCATCGACAGCCCGGCCTCTTCTTGCGAAGCGTCAAG
TAAAACTCGGAAGCGAGTGGCGGGGCTGGGGGGCTGTTGTGTTTTTTATG
GCAACCTGTGTGCCATTCCCTGTCGTCCTTGAGGTTTTGGCTTGGCAGTG
GTGGCGCCTAGAAATGAGGTAA
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