mRNA_S-dermatodea_contig13307.1965.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig13307.1965.1
Unique NamemRNA_S-dermatodea_contig13307.1965.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig13307.1965.1 vs. uniprot
Match: D7FZ48_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ48_ECTSI)

HSP 1 Score: 306 bits (785), Expect = 2.800e-97
Identity = 152/225 (67.56%), Postives = 169/225 (75.11%), Query Frame = 3
Query:   60 SKWTAQEVLPMEKVVIEPSRKECDFEGRPSVGNN---SHPQASSTPSAQSHLVFTGLERTGLDLRSLHVTAHFGVDSVHKVGKVTSPIQVGANGRTYAAVFYPSMQEIWPELYSTSNIRVVEVDVVVEIGSDFGEYQYVGPHLKVTYLRSPHSTDDNDQAPPTSGRRTGSRPAVGSFDEAPHVSYSCVDYSCGDWLAEMCHSMFRPGANAHQPLHGDPEDVMSVD 725
            +KW     LPMEKVVIEPSR ECDFEGRP+   +     P   S+   Q HLVFTGL  TG DLRSL VTAHFGVDSVHKVGKVTSPIQ+G+NGR YA VFYPSMQEIWPELYSTSNIRVVEVD+VVEI SD GEYQYVGP LKVTYLR+    D  +  P  +GRRT SR  +    +   VSYSCVDYSCGDW ++MC S+FR GA AHQPLH DP D+M+VD
Sbjct:  362 AKWANDGHLPMEKVVIEPSRNECDFEGRPTPPTDPKSGEPPIPSSTDRQCHLVFTGLNNTGQDLRSLRVTAHFGVDSVHKVGKVTSPIQLGSNGRAYAGVFYPSMQEIWPELYSTSNIRVVEVDLVVEIRSDSGEYQYVGPQLKVTYLRAAPPADAAEATPRPAGRRTASRAPIPFNSDGHQVSYSCVDYSCGDWFSDMCQSVFRSGATAHQPLHDDPNDLMNVD 586          
BLAST of mRNA_S-dermatodea_contig13307.1965.1 vs. uniprot
Match: D7G7N5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N5_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 1.100e-54
Identity = 105/182 (57.69%), Postives = 131/182 (71.98%), Query Frame = 3
Query:   57 QSKWTAQEV-----LPMEKVVIEPSRKECDFEGRP--SVGNNSHPQASSTPSA-QSHLVFTGLERTGLDLRSLHVTAHFGVDSVHKVGKVTSPIQVGANGRTYAAVFYPSMQEIWPELYSTSNIRVVEVDVVVEIGSDF-GEYQYVGPHLKVTYLRS-PHSTDDNDQAPPTSGRRTGSRPAV 572
            +S W A+ V     LPM  VV+E SRKECD EGRP   +GN+  P  +S+P   +SH+ FTGLE+TG DLR L VTA FGVD+VH++  VTSPI+VG +GR Y+ VFYP MQEIWPELY+TSNIR+VEVDV +EI SD  GE+++VGPHLKV Y R+ P   D  D +P  +GR+T  R AV
Sbjct:   88 ESSWDAELVGDFGRLPMGDVVVEVSRKECDLEGRPITRIGNSLTPITASSPDVRESHIEFTGLEKTGHDLRGLRVTAIFGVDAVHQIACVTSPIEVGPDGRAYSRVFYPGMQEIWPELYNTSNIRLVEVDVAIEILSDTCGEFRFVGPHLKVAYRRAIPPVDDGGDVSPRPTGRQTARRVAV 269          
BLAST of mRNA_S-dermatodea_contig13307.1965.1 vs. uniprot
Match: D7G7N4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N4_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 2.200e-44
Identity = 83/138 (60.14%), Postives = 102/138 (73.91%), Query Frame = 3
Query:   84 LPMEKVVIEPSRKECDFEGRPSVGNNSHPQASSTPSAQ---SHLVFTGLERTGLDLRSLHVTAHFGVDSVHKVGKVTSPIQVGANGRTYAAVFYPSMQEIWPELYSTSNIRVVEVDVVVEIGSDFG-EYQYVGPHLKV 485
            LP+E VV+  +RKECDFEGRP  G  S    SST S+    +H+VFTGL  TG D R L VT  FGVD+VH++  VTSPIQV A+GR Y+ VFYPS++E+WPELY T ++R VEVDV VE+ SD G E++YVGPHLKV
Sbjct:   42 LPIEGVVVALARKECDFEGRPLPGGGSGMTPSSTVSSNGRDTHVVFTGLNDTGHDPRGLRVTVIFGVDAVHQIACVTSPIQVAADGRAYSRVFYPSLEEVWPELYYTVDVRAVEVDVAVEVLSDDGREFRYVGPHLKV 179          
BLAST of mRNA_S-dermatodea_contig13307.1965.1 vs. uniprot
Match: A0A6H5JDQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDQ6_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 5.140e-43
Identity = 84/142 (59.15%), Postives = 104/142 (73.24%), Query Frame = 3
Query:   84 LPMEKVVIEPSRKECDFEGRPSVGNNSHPQASSTPSAQ---SHLVFTGLERTGLDLRSLHVTAHFGVDSVHKVGKVTSPIQVGANGRTYAAVFYPSMQEIWPELYSTSNIRVVEVDVVVEIGSDFG-EYQYVGPHLKVTYLR 497
            LP+E VV+  +RKECDFEGRP  G  S    SST S+    +H+VFTGL  TG D R L VT  FGVD+VH++  VTSP+QV A+GR Y+ VFYPS++++WPELY T ++R VEVDV VEI SD G E++YVGPHLKV Y R
Sbjct:  220 LPIEGVVVALARKECDFEGRPLPGGGSGMTPSSTVSSNGRDTHVVFTGLHNTGHDPRGLRVTVIFGVDAVHQIACVTSPVQVAADGRAYSRVFYPSLEDVWPELYYTVDVRAVEVDVAVEILSDDGREFRYVGPHLKVGYTR 361          
BLAST of mRNA_S-dermatodea_contig13307.1965.1 vs. uniprot
Match: A0A6H5JMY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMY9_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 2.760e-35
Identity = 78/137 (56.93%), Postives = 95/137 (69.34%), Query Frame = 3
Query:   30 GGQPPQESAQSKWTAQEV-----LPMEKVVIEPSRKECDFEGRP--SVGNNSHP-QASSTPSAQSHLVFTGLERTGLDLRSLHVTAHFGVDSVHKVGKVTSPIQVGANGRTYAAVFYPSMQEIWPELYSTSNIRVVE 416
            GG     + +  W A+ V     LPM  VV+E SRKECD EGRP   +GN+  P  ASST   +S + FTGLE+TG DLR L VTA FGVD+VH++  VTSPI+VG +GR  + VFYP MQEIWPELY+TSNIR+VE
Sbjct:   83 GGDSLSSTPECSWDAELVGDCGRLPMGDVVVEVSRKECDLEGRPIARIGNSLTPITASSTDVRESLIEFTGLEKTGHDLRGLCVTAIFGVDAVHQIACVTSPIEVGPSGRACSRVFYPGMQEIWPELYNTSNIRLVE 219          
BLAST of mRNA_S-dermatodea_contig13307.1965.1 vs. uniprot
Match: D7G6J1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J1_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 1.250e-22
Identity = 57/140 (40.71%), Postives = 74/140 (52.86%), Query Frame = 3
Query:  126 CDFEGRPSVGNNSHPQASSTPSA----------QSHLVFTGLERTGLDLRSLHVTAHFGVDSVHKVGKVTSPIQVGANGRTYAAVFYPSMQEIWPELYSTSNIRVVEVDVVVEIGSDFGEYQYVGPHLKVTYLRSPHSTD 515
            CDF GR       HPQ S  PSA          + HLVFTGL   G  L  L  T +F ++S   + +   P+QVG + R Y AV YP+M E+WPE+Y    + VV+VDV + + S     +Y G  LKVTY R+  S D
Sbjct:    6 CDFHGRAVA----HPQESVVPSALAACFMSGSLEQHLVFTGLVGAGPHLDYLTTTVYFSINSGRPLARAAGPMQVGEDERVYVAVKYPTMNELWPEIYQNVAVEVVQVDVFITVRSGHKTIRYPGTELKVTYRRTRMSPD 141          
BLAST of mRNA_S-dermatodea_contig13307.1965.1 vs. uniprot
Match: D8LCL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL1_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 2.750e-21
Identity = 57/137 (41.61%), Postives = 79/137 (57.66%), Query Frame = 3
Query:  111 PSRKECDFEGRPSVGNNSHPQ----ASSTPSA--QSHLVFTGLERTGLDLRSLHVTAHFGVDSVHKVGKVTSPIQVGANGRTYAAVFYPSMQEIWPELYSTSNIRVVEVDVVVEIGSDFGEYQYVGPHLKVTYLRSP 503
            P  ++ DFEGR    N         A S P +  + HLVF GL  TG  L +L   A F  +   K  ++  P+Q G+NGR Y AV YPSM E+WPE+Y+++ IRVV+VD++VE+ S +G+  Y+   LK  Y R P
Sbjct:  204 PVVEDFDFEGRTIEPNKPSDSPFAAAFSVPRSDDEQHLVFIGLGETGRPLPTLAARAQFSANPGRKAERMVGPLQAGSNGRVYGAVQYPSMAELWPEVYNSTAIRVVKVDMLVEVRSRYGDSLYLATELKAMYRRPP 340          
BLAST of mRNA_S-dermatodea_contig13307.1965.1 vs. uniprot
Match: D8LCJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ7_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 5.610e-21
Identity = 60/141 (42.55%), Postives = 82/141 (58.16%), Query Frame = 3
Query:   99 VVIEPSRKECDFEGRPSVGNN---SHPQAS--STPSAQS--HLVFTGLERTGLDLRSLHVTAHFGVDSVHKVGKVTSPIQVGANGRTYAAVFYPSMQEIWPELYSTSNIRVVEVDVVVEIGSDFGEYQYVGPHLKVTYLRS 500
            + +E  R+E DF+GR    +N     P AS  S P +    +L FTGL  TG  LR L     F V+S      V  P+Q G NGR Y A+ YPSM E+WPE+ STS +RVV+VD +V+I S  G++ ++G   KVTY ++
Sbjct:  466 IAVESLREEFDFDGRSYQPDNPPKDSPFASVFSVPCSDEAQYLAFTGLGHTGQPLRMLTARVQFSVNSERTAESVVGPLQAGGNGRVYGALRYPSMSELWPEICSTSAVRVVQVDTLVDIRSRQGDFLFLGNGPKVTYRQA 606          
BLAST of mRNA_S-dermatodea_contig13307.1965.1 vs. uniprot
Match: A0A6H5JZ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ42_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 1.640e-17
Identity = 56/144 (38.89%), Postives = 81/144 (56.25%), Query Frame = 3
Query:   90 MEKVVIEPSRKECDFEGRPSVGN----NSHPQASSTPSA--QSHLVFTGLERTGLDLRSLHVTAHFGVDSVHKVGKVTSPIQV--GANGRTYAAVFYPSMQEIWPELYSTSNIRVVEVDVVVEIGSDFGEYQYVGPHLKVTYLR 497
            ++ V IE  R++ DFEGR    N    +    A S P +  + +LVF GL  TG  L +L   A F  +   +  ++  P+Q   G+NGR Y AV YPSM E+WPE+Y++  IRVV+VD++VE+ S  G+  Y+   L   Y R
Sbjct:  279 VDNVFIESLREDFDFEGRTIEPNKPSGSPFAAALSVPRSDDEQYLVFIGLGETGRPLPALAARAQFSANPGRQAERMVGPLQARAGSNGRVYGAVQYPSMAELWPEVYNSKAIRVVKVDMLVEVRSRSGDSLYLATELMAMYRR 422          
BLAST of mRNA_S-dermatodea_contig13307.1965.1 vs. uniprot
Match: A0A6H5L3B8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3B8_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 7.210e-14
Identity = 43/108 (39.81%), Postives = 57/108 (52.78%), Query Frame = 3
Query:  126 CDFEGRPSVGNNSHPQASSTPSA----------QSHLVFTGLERTGLDLRSLHVTAHFGVDSVHKVGKVTSPIQVGANGRTYAAVFYPSMQEIWPELYSTSNIRVVEV 419
            CDF GR       HPQ S   SA          + HLVFTGL   G DL  L  T +F ++S   + +   P+QVG + R Y AV +P+M E+WPE+Y    + VV+V
Sbjct:   15 CDFHGRAVA----HPQESVDSSALAACFMSGSLEQHLVFTGLVGAGPDLDYLTTTVYFSINSGRPLARAAGPMQVGEDERVYVAVKFPTMNELWPEIYQNVAVEVVQV 118          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13307.1965.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7FZ48_ECTSI2.800e-9767.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G7N5_ECTSI1.100e-5457.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G7N4_ECTSI2.200e-4460.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JDQ6_9PHAE5.140e-4359.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMY9_9PHAE2.760e-3556.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6J1_ECTSI1.250e-2240.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCL1_ECTSI2.750e-2141.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCJ7_ECTSI5.610e-2142.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZ42_9PHAE1.640e-1738.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3B8_9PHAE7.210e-1439.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13307contigS-dermatodea_contig13307:1976..3947 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons5
Model size886
Cds size642
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924282.0827749-UTR-S-dermatodea_contig13307:1975..21301622924282.0827749-UTR-S-dermatodea_contig13307:1975..2130Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig13307 1976..2130 -
1694079148.5445852-UTR-S-dermatodea_contig13307:1975..21301694079148.5445852-UTR-S-dermatodea_contig13307:1975..2130Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig13307 1976..2130 -
1622924282.1583674-UTR-S-dermatodea_contig13307:3858..39471622924282.1583674-UTR-S-dermatodea_contig13307:3858..3947Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig13307 3859..3947 -
1694079148.6065733-UTR-S-dermatodea_contig13307:3858..39471694079148.6065733-UTR-S-dermatodea_contig13307:3858..3947Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig13307 3859..3947 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924282.0928187-CDS-S-dermatodea_contig13307:2130..23791622924282.0928187-CDS-S-dermatodea_contig13307:2130..2379Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13307 2131..2379 -
1694079148.5563605-CDS-S-dermatodea_contig13307:2130..23791694079148.5563605-CDS-S-dermatodea_contig13307:2130..2379Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13307 2131..2379 -
1622924282.109178-CDS-S-dermatodea_contig13307:2709..27751622924282.109178-CDS-S-dermatodea_contig13307:2709..2775Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13307 2710..2775 -
1694079148.5663757-CDS-S-dermatodea_contig13307:2709..27751694079148.5663757-CDS-S-dermatodea_contig13307:2709..2775Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13307 2710..2775 -
1622924282.1255705-CDS-S-dermatodea_contig13307:3057..31561622924282.1255705-CDS-S-dermatodea_contig13307:3057..3156Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13307 3058..3156 -
1694079148.5777595-CDS-S-dermatodea_contig13307:3057..31561694079148.5777595-CDS-S-dermatodea_contig13307:3057..3156Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13307 3058..3156 -
1622924282.1379786-CDS-S-dermatodea_contig13307:3406..36011622924282.1379786-CDS-S-dermatodea_contig13307:3406..3601Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13307 3407..3601 -
1694079148.585848-CDS-S-dermatodea_contig13307:3406..36011694079148.585848-CDS-S-dermatodea_contig13307:3406..3601Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13307 3407..3601 -
1622924282.1497998-CDS-S-dermatodea_contig13307:3825..38581622924282.1497998-CDS-S-dermatodea_contig13307:3825..3858Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13307 3826..3858 -
1694079148.5955467-CDS-S-dermatodea_contig13307:3825..38581694079148.5955467-CDS-S-dermatodea_contig13307:3825..3858Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13307 3826..3858 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13307.1965.1prot_S-dermatodea_contig13307.1965.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig13307 2131..3858 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig13307.1965.1

>prot_S-dermatodea_contig13307.1965.1 ID=prot_S-dermatodea_contig13307.1965.1|Name=mRNA_S-dermatodea_contig13307.1965.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=214bp
MEKVVIEPSRKECDFEGRPSVGNNSHPQASSTPSAQSHLVFTGLERTGLD
LRSLHVTAHFGVDSVHKVGKVTSPIQVGANGRTYAAVFYPSMQEIWPELY
STSNIRVVEVDVVVEIGSDFGEYQYVGPHLKVTYLRSPHSTDDNDQAPPT
SGRRTGSRPAVGSFDEAPHVSYSCVDYSCGDWLAEMCHSMFRPGANAHQP
LHGDPEDVMSVDS*
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mRNA from alignment at S-dermatodea_contig13307:1976..3947-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig13307.1965.1 ID=mRNA_S-dermatodea_contig13307.1965.1|Name=mRNA_S-dermatodea_contig13307.1965.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1972bp|location=Sequence derived from alignment at S-dermatodea_contig13307:1976..3947- (Saccorhiza dermatodea SderLu1190fm monoicous)
GGGACAACAGTGCCGACGCCGGGGCGGGCGGCGGTCAACCTCCGCAGGAA AGCGCCCAGTCGAAGTGGACTGCCCAGGAGGTGCTCCCAATGGAGAAGGT CGTCATCGAGCCGTCGCGAAAGGTGGGTGGCACGACGAGACGTTAGCGTA GGGTTTGTGGACCGGGGGTAGGGCGACCAAGATAGCCGCGGACGGTTTAG GCGGGGTCGTTGTGTTCGTGTGAGTTGGGTTGCTTCCCCTTCGTCGTGTT TACCAGCGCCACCAAAATAAACCCACCATATCTGTACGAACGGCACGATC GATAAATGACGCCCCACCCCCTCGTCTTCTTACCACAAACACGCAGGAGT GTGACTTCGAAGGTCGCCCTTCAGTGGGCAACAACTCGCACCCCCAGGCC TCGTCTACCCCTAGCGCGCAGAGCCACCTCGTGTTCACGGGACTCGAGCG CACCGGGCTTGACCTTCGTAGCTTGCACGTCACGGCGCACTTTGGGGTCG ACTCGGTGCACAAAGTGGGCAAGGTCACCAGTCCCATACAGGCGAGGGCC ACTTCGTTGCTCCTTCCTGGCGCTTTCTTGTCGGAGTGTGATTCGTAAGC GTATTTATGACGCATACCCATTGTTCGACACGTGTGCGTAATTTTCTGTC TTGGTGCTGTATCCCCAGACACCGCCAGCGTGTCCTGTTAGTAGTTCGTC GCGTCTAGGCACGGCGACCAACCGTCTTTTCGCCATTTGTTTTGACGCTA TCGATCGCCTTTTCCCCCTCCTTACCCTGCCTTCTCTCCAGGTTGGCGCC AATGGACGCACGTACGCGGCGGTCTTCTACCCGAGTATGCAAGAGATCTG GCCAGAGTTATACAGCACCTCGAATATTCGCGTGGTTGAGGTGCGTTTAT GGCAACTTTCGCTTTCGCTGTCGAGGAACCTGAAAAAAAGTATGAAAGAG TCAGCATCGCTGCTCATGCCCTAAAACGTTTTGGCTTCCGTGACGTGATT TTCGCCTGTCGCGAGGTTCGCGTCAGCTTTTAGTGTTACCCGTTAAACTT GCAAGGCTGCGGTGGATTGATGCACCGTGCTTTCCCGGATGTGGTGGTGC GGGTTCTCCCCGCCCCAAGTGTCCCCCCCCCCCCCCCCTCATTTTCACAA CAACTTTCCGCCTTGAACACAGGTGGATGTGGTTGTTGAAATTGGCTCCG ACTTCGGCGAGTACCAGTACGTCGGTCCCCACCTCAAGGTGCGTTTTTAT ATTGTTATCTCGCAGGGGCGCAAGCACTAACTCTTGCTTTTCGTGTCGCT TCTGTCGTGAGAAGACCACGTCTGGGCGTGCGCTTCTTTCACTTTGTTTA TAGGTATAGCCTGTTGCTCTGCTTGTGCTTTCGTGCCGTGTTCGAGTCGC CTGCCAGATCGCCCCTTCTCTCAGGCCTTTCCCCGTTCGAGCTCTCGCGG CCCTTTCTCGTGGAGAATGGACATGCCATAACTCCGCACCGGACCAAAAC TCACCCTTTGTGTCGATTGTTTTCGCCGTTCCTCGTCCCTTGGCAACTGT CTCCATCACGTTTTGCAGGTGACGTACCTGCGCTCCCCGCATTCCACCGA CGACAACGACCAAGCCCCTCCAACCTCTGGAAGGCGAACAGGGTCGCGCC CCGCGGTGGGATCGTTCGACGAGGCGCCCCACGTGTCCTACAGCTGCGTG GACTACTCGTGCGGCGACTGGTTAGCAGAAATGTGCCACTCCATGTTCCG GCCAGGGGCGAACGCACATCAGCCCTTGCACGGCGATCCCGAGGATGTCA TGAGCGTCGACTCCTGAGGGGTCATCTGCGCGGGTAGGTGCACGCTATGA TTGCCGCCGTCAACCTCGTTGTCAGTCCTTCGCGGAAGGGCACCCACCGG TATGCGTAGGGCTCGACTCCACGCTCTAATCGGGGCAGCAAAGCCTGGTG CGGGTGCTGTTTTCTACCTGAC
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Coding sequence (CDS) from alignment at S-dermatodea_contig13307:1976..3947-

>mRNA_S-dermatodea_contig13307.1965.1 ID=mRNA_S-dermatodea_contig13307.1965.1|Name=mRNA_S-dermatodea_contig13307.1965.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1284bp|location=Sequence derived from alignment at S-dermatodea_contig13307:1976..3947- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGAGAAGGTCGTCATCGAGCCGTCGCGAAAGATGGAGAAGGTCGTCAT
CGAGCCGTCGCGAAAGGAGTGTGACTTCGAAGGTCGCCCTTCAGTGGGCA
ACAACTCGCACCCCCAGGCCTCGTCTACCCCTAGCGCGCAGAGCCACCTC
GTGTTCACGGGACTCGAGCGCACCGGGCTTGACCTTCGTAGCTTGCACGT
CACGGCGCACTTTGGGGTCGACTCGGTGCACAAAGTGGGCAAGGTCACCA
GTCCCATACAGGAGTGTGACTTCGAAGGTCGCCCTTCAGTGGGCAACAAC
TCGCACCCCCAGGCCTCGTCTACCCCTAGCGCGCAGAGCCACCTCGTGTT
CACGGGACTCGAGCGCACCGGGCTTGACCTTCGTAGCTTGCACGTCACGG
CGCACTTTGGGGTCGACTCGGTGCACAAAGTGGGCAAGGTCACCAGTCCC
ATACAGGTTGGCGCCAATGGACGCACGTACGCGGCGGTCTTCTACCCGAG
TATGCAAGAGATCTGGCCAGAGTTATACAGCACCTCGAATATTCGCGTGG
TTGAGGTTGGCGCCAATGGACGCACGTACGCGGCGGTCTTCTACCCGAGT
ATGCAAGAGATCTGGCCAGAGTTATACAGCACCTCGAATATTCGCGTGGT
TGAGGTGGATGTGGTTGTTGAAATTGGCTCCGACTTCGGCGAGTACCAGT
ACGTCGGTCCCCACCTCAAGGTGGATGTGGTTGTTGAAATTGGCTCCGAC
TTCGGCGAGTACCAGTACGTCGGTCCCCACCTCAAGGTGACGTACCTGCG
CTCCCCGCATTCCACCGACGACAACGACCAAGCCCCTCCAACCTCTGGAA
GGCGAACAGGGTCGCGCCCCGCGGTGGGATCGTTCGACGAGGCGCCCCAC
GTGTCCTACAGCTGCGTGGACTACTCGTGCGGCGACTGGTTAGCAGAAAT
GTGCCACTCCATGTTCCGGCCAGGGGCGAACGCACATCAGCCCTTGCACG
GCGATCCCGAGGATGTCATGAGCGTCGACTCCTGAGTGACGTACCTGCGC
TCCCCGCATTCCACCGACGACAACGACCAAGCCCCTCCAACCTCTGGAAG
GCGAACAGGGTCGCGCCCCGCGGTGGGATCGTTCGACGAGGCGCCCCACG
TGTCCTACAGCTGCGTGGACTACTCGTGCGGCGACTGGTTAGCAGAAATG
TGCCACTCCATGTTCCGGCCAGGGGCGAACGCACATCAGCCCTTGCACGG
CGATCCCGAGGATGTCATGAGCGTCGACTCCTGA
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