mRNA_S-dermatodea_contig13293.1957.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig13293.1957.1 vs. uniprot
Match: D8LS28_ECTSI (PX domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS28_ECTSI) HSP 1 Score: 148 bits (374), Expect = 1.930e-37 Identity = 102/222 (45.95%), Postives = 127/222 (57.21%), Query Frame = 1
Query: 13 QIPGDPPLSLVAAWAVYPEWLGPDSPASLRRFFGLFSRLIDIPLSTPPPSSSVPGDXXXXXXGGDGTGSSIADRLNPTRLCGQMLAQNSQKGENNSSEIPSVAHWSNSVAAXXXXXXXXXXXXTKNKNVIVFYSTRLRILSNGERSDRAAVSASGVLPREDLRNRRLKLVASVLDGPPMVAEALP-AGGALLGQKATLRYFRGEKYLEVDVDLASALPASQV 675
QIPGDPPLSLVAAWAV+PE LGPDSP SLRRFFG+F RL+DIPLS+P PSS GG G + G + +S E + S+ S V +KN I ST N +RS +A GV + D +++KL S+LDGP +VAEALP +G +LLG +A+LRYFRGE+YLEVDVDLAS+ +SQV
Sbjct: 641 QIPGDPPLSLVAAWAVHPECLGPDSPESLRRFFGVFYRLVDIPLSSPRPSSGE----TRAGGGGAADGXXXXXAVASPTASGSLTPSDSHLWETSDSDRDSSGDELEGVGGRSGGGGLTNGG---DKNKIGNVSTGETPAGN-QRSGTVKAAADGVPGQGD---QQIKLAVSLLDGPQVVAEALPESGSSLLGHEASLRYFRGERYLEVDVDLASSSASSQV 851
BLAST of mRNA_S-dermatodea_contig13293.1957.1 vs. uniprot
Match: A0A7S2CMY1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMY1_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 3.740e-11 Identity = 36/68 (52.94%), Postives = 49/68 (72.06%), Query Frame = 1
Query: 472 SGVLPREDLRNRRLKLVASVLDGPPMVAEALPAGGALLGQKATLRYFRGEKYLEVDVDLASALPASQV 675
+GV P E LRN+R KL+ ++ +GP +V +A+ A ALLGQK T RYFRGE Y+E DV + S+ A+QV
Sbjct: 365 AGVYPLEHLRNQRFKLIPAITEGPFLVKQAVGAKPALLGQKLTQRYFRGEHYVETDVHVGSSAIANQV 432
BLAST of mRNA_S-dermatodea_contig13293.1957.1 vs. uniprot
Match: W7U3Y4_9STRA (PX domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3Y4_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 1.470e-10 Identity = 33/61 (54.10%), Postives = 45/61 (73.77%), Query Frame = 1
Query: 493 DLRNRRLKLVASVLDGPPMVAEALPAGGALLGQKATLRYFRGEKYLEVDVDLASALPASQV 675
D +N+R KL+ S++DGP M+ A+ +LGQK T RYFRGE Y+EVDVD+AS+ ASQ+
Sbjct: 708 DFKNKRFKLIPSIVDGPSMIKWAVGNKPTILGQKLTQRYFRGEDYVEVDVDIASSALASQI 768
BLAST of mRNA_S-dermatodea_contig13293.1957.1 vs. uniprot
Match: D7G1Z5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Z5_ECTSI) HSP 1 Score: 67.4 bits (163), Expect = 2.090e-9 Identity = 32/68 (47.06%), Postives = 49/68 (72.06%), Query Frame = 1
Query: 472 SGVLPREDLRNRRLKLVASVLDGPPMVAEALPAGGALLGQKATLRYFRGEKYLEVDVDLASALPASQV 675
+G+LP +D RN+R KL+ SV+ GP +V +A+ ALLG+K + RYFRG Y+E DVD+ S++ A ++
Sbjct: 515 AGLLPVDDFRNQRFKLIPSVVSGPFIVRKAVGNKPALLGRKVSQRYFRGPGYVETDVDVGSSMIAEKI 582
BLAST of mRNA_S-dermatodea_contig13293.1957.1 vs. uniprot
Match: A0A835YT80_9STRA (EDR2_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT80_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 1.610e-6 Identity = 27/69 (39.13%), Postives = 42/69 (60.87%), Query Frame = 1
Query: 469 ASGVLPREDLRNRRLKLVASVLDGPPMVAEALPAGGALLGQKATLRYFRGEKYLEVDVDLASALPASQV 675
+ G+ N R KL+ ++DGP +V A+ A LLG K T RYFRGE Y+E +V++ S++ A ++
Sbjct: 43 SGGIRHSYAFHNSRFKLIPQIVDGPWVVRRAVGAVPCLLGTKVTTRYFRGEHYVETNVEVGSSVVAQRI 111
BLAST of mRNA_S-dermatodea_contig13293.1957.1 vs. uniprot
Match: D7FIG2_ECTSI (EDR2_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG2_ECTSI) HSP 1 Score: 58.5 bits (140), Expect = 1.880e-6 Identity = 29/64 (45.31%), Postives = 41/64 (64.06%), Query Frame = 1
Query: 484 PREDLRNRRLKLVASVLDGPPMVAEALPAGGALLGQKATLRYFRGEKYLEVDVDLASALPASQV 675
P D RN R KL+ V+ GP MV +A+ + LLG K T RY+RGE+Y+E D+D S+ A+ +
Sbjct: 354 PYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASL 417
BLAST of mRNA_S-dermatodea_contig13293.1957.1 vs. uniprot
Match: A0A6H5K9Q7_9PHAE (EDR2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Q7_9PHAE) HSP 1 Score: 58.5 bits (140), Expect = 2.110e-6 Identity = 29/64 (45.31%), Postives = 41/64 (64.06%), Query Frame = 1
Query: 484 PREDLRNRRLKLVASVLDGPPMVAEALPAGGALLGQKATLRYFRGEKYLEVDVDLASALPASQV 675
P D RN R KL+ V+ GP MV +A+ + LLG K T RY+RGE+Y+E D+D S+ A+ +
Sbjct: 547 PYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASL 610
BLAST of mRNA_S-dermatodea_contig13293.1957.1 vs. uniprot
Match: UPI000C1D4FBF (protein ENHANCED DISEASE RESISTANCE 2-like isoform X1 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D4FBF) HSP 1 Score: 56.6 bits (135), Expect = 9.600e-6 Identity = 26/59 (44.07%), Postives = 40/59 (67.80%), Query Frame = 1
Query: 499 RNRRLKLVASVLDGPPMVAEALPAGGALLGQKATLRYFRGEKYLEVDVDLASALPASQV 675
RN R KL+ + +GP +V +++ L+GQ +RYFRG+ YLEVD+D+ S+ AS+V
Sbjct: 614 RNSRFKLIPYISEGPWIVKQSVRKKPCLIGQALEIRYFRGDNYLEVDIDVGSSTVASRV 672
BLAST of mRNA_S-dermatodea_contig13293.1957.1 vs. uniprot
Match: UPI001FB06EE4 (protein ENHANCED DISEASE RESISTANCE 2-like n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB06EE4) HSP 1 Score: 55.1 bits (131), Expect = 1.960e-5 Identity = 31/63 (49.21%), Postives = 41/63 (65.08%), Query Frame = 1
Query: 490 EDLRNRRLKLVASVLDGPPMVAEALPAGGA-LLGQKATLRYFRGEKYLEVDVDLASALPASQV 675
+ RN+RLKLV ++ GP +V A+ A LLG+ T Y+RGE YLEVDVDL S+ AS +
Sbjct: 155 DTFRNQRLKLVNRIVKGPWIVKTAVGNYAACLLGKALTCNYYRGENYLEVDVDLGSSAIASAI 217
BLAST of mRNA_S-dermatodea_contig13293.1957.1 vs. uniprot
Match: A0A7J9JP51_9ROSI (EDR2_C domain-containing protein n=1 Tax=Gossypium armourianum TaxID=34283 RepID=A0A7J9JP51_9ROSI) HSP 1 Score: 54.3 bits (129), Expect = 2.310e-5 Identity = 27/60 (45.00%), Postives = 43/60 (71.67%), Query Frame = 1
Query: 499 RNRRLKLVASVLDGPPMVAEALPAGGA-LLGQKATLRYFRGEKYLEVDVDLASALPASQV 675
RN+RLK+V +++GP +V +A+ A L+G+ T Y+RGE YLE+DVD+AS+ A+ +
Sbjct: 81 RNQRLKMVNRIVEGPWIVKKAVGNYAACLIGKALTCNYYRGENYLEIDVDVASSAVANAI 140 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13293.1957.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig13293.1957.1 >prot_S-dermatodea_contig13293.1957.1 ID=prot_S-dermatodea_contig13293.1957.1|Name=mRNA_S-dermatodea_contig13293.1957.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=225bp MKTSQIPGDPPLSLVAAWAVYPEWLGPDSPASLRRFFGLFSRLIDIPLSTback to top mRNA from alignment at S-dermatodea_contig13293:890..4926- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig13293.1957.1 ID=mRNA_S-dermatodea_contig13293.1957.1|Name=mRNA_S-dermatodea_contig13293.1957.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4037bp|location=Sequence derived from alignment at S-dermatodea_contig13293:890..4926- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig13293:890..4926- >mRNA_S-dermatodea_contig13293.1957.1 ID=mRNA_S-dermatodea_contig13293.1957.1|Name=mRNA_S-dermatodea_contig13293.1957.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1350bp|location=Sequence derived from alignment at S-dermatodea_contig13293:890..4926- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |