prot_S-dermatodea_contig13282.1946.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig13282.1946.1
Unique Nameprot_S-dermatodea_contig13282.1946.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length136
Homology
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BLAST of mRNA_S-dermatodea_contig13282.1946.1 vs. uniprot
Match: D7G2P0_ECTSI (SnoaL-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P0_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 4.950e-10
Identity = 37/86 (43.02%), Postives = 49/86 (56.98%), Query Frame = 0 
Query:   40 PRYLNVTNIFRKAGGRWLMXXXXXXXXXXXQSNKELRTTMGLGGLHLGEGADGVPRIINLGDQS---FNVDNGKMDGKLDEMIESL 122
            PR LNVTNI+RKAGG+WLM           +S    R  MG+ GL   +G +G+PRIINL +Q            D +L+EM+E+L
Sbjct:  235 PRVLNVTNIYRKAGGKWLMVHHHASLPPTGKSGSSRRVAMGIDGLK--DGLEGMPRIINLSEQGGGFXXXXXXXKDNRLEEMLEAL 318
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BLAST of mRNA_S-dermatodea_contig13282.1946.1 vs. uniprot
Match: A0A6H5L954_9PHAE (UVR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L954_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 8.700e-7
Identity = 33/68 (48.53%), Postives = 40/68 (58.82%), Query Frame = 0 
Query:   40 PRYLNVTNIFRKAGGRWLMXXXXXXXXXXXQSNKELRTTMGLGGLH-LGEGA----DGVPRIINLGDQ 102
            PR LNVTNI+RKAGG+WLM           +S    R  MG+ GL  +  GA    +G+PRIINL DQ
Sbjct:  405 PRVLNVTNIYRKAGGKWLMVHHHASLPPMGKSGSSRRVAMGIDGLKDVRAGAVVALEGMPRIINLSDQ 472
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13282.1946.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2P0_ECTSI4.950e-1043.02SnoaL-like domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5L954_9PHAE8.700e-748.53UVR domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037401SnoaL-like domainPFAMPF13474SnoaL_3coord: 34..67
e-value: 1.2E-6
score: 28.8
NoneNo IPR availableGENE3D3.10.450.50coord: 26..78
e-value: 1.4E-10
score: 42.9
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 37..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13282contigS-dermatodea_contig13282:388..6655 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13282.1946.1mRNA_S-dermatodea_contig13282.1946.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig13282 388..6655 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig13282.1946.1 ID=prot_S-dermatodea_contig13282.1946.1|Name=mRNA_S-dermatodea_contig13282.1946.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=136bp
AAAAEEALPAQLSSGGGGGGGGGGGGGGGSVGTTKKKKKPRYLNVTNIFR
KAGGRWLMVHHHASLPPPPQSNKELRTTMGLGGLHLGEGADGVPRIINLG
DQSFNVDNGKMDGKLDEMIESLRSQLPGGGSFNLGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037401SnoaL-like
IPR032710NTF2-like_dom_sf