prot_S-dermatodea_contig13227.1923.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig13227.1923.1
Unique Nameprot_S-dermatodea_contig13227.1923.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length163
Homology
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BLAST of mRNA_S-dermatodea_contig13227.1923.1 vs. uniprot
Match: D7FUH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH8_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 2.770e-15
Identity = 61/162 (37.65%), Postives = 79/162 (48.77%), Query Frame = 0 
Query:    1 KTFVDQGYTVNQIREALQRENELCPELSLSECQRQVFRGSISTISVCDNGAQDCSSVGTLDPVLCMEESEYPTDLWQNVDFSGLEYTERTCCGSNYTNSDTEASCVVALETGNSGGDSDSNGKTTIGVGLAGXXXXXXXXXXXXXFVVHKRKKKNQLPKRDR 162
            +TFVDQGYT +++REAL+ +NE CP  SL+ECQRQ  R             Q     G LD          P     +      +YT+RTCCGSN+T++ TE SC                G   I      XXXXXX       + VH++KK+N+ PKRDR
Sbjct:    6 QTFVDQGYTEDEVREALESQNEACPTFSLTECQRQCVR-------------QHHRGRGLLD-------GRQPGARPVHGGIGMWDYTQRTCCGSNFTSTSTEPSCXXXXXXXXXXXXXXMEG-ANIXXXXXXXXXXXXGLILTALYFVHRKKKRNRSPKRDR 146
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13227.1923.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUH8_ECTSI2.770e-1537.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..125
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..148
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 149..162
NoneNo IPR availableTMHMMTMhelixcoord: 126..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13227contigS-dermatodea_contig13227:1296..6506 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13227.1923.1mRNA_S-dermatodea_contig13227.1923.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig13227 1296..6506 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig13227.1923.1 ID=prot_S-dermatodea_contig13227.1923.1|Name=mRNA_S-dermatodea_contig13227.1923.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=163bp
KTFVDQGYTVNQIREALQRENELCPELSLSECQRQVFRGSISTISVCDNG
AQDCSSVGTLDPVLCMEESEYPTDLWQNVDFSGLEYTERTCCGSNYTNSD
TEASCVVALETGNSGGDSDSNGKTTIGVGLAGGVAVAVVLILLALFVVHK
RKKKNQLPKRDR*
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