prot_S-dermatodea_contig1320.1908.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1320.1908.1
Unique Nameprot_S-dermatodea_contig1320.1908.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length421
Homology
BLAST of mRNA_S-dermatodea_contig1320.1908.1 vs. uniprot
Match: A0A6H5K9Y9_9PHAE (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Y9_9PHAE)

HSP 1 Score: 308 bits (789), Expect = 2.620e-97
Identity = 210/375 (56.00%), Postives = 236/375 (62.93%), Query Frame = 0
Query:   72 RELPPLSEDA-----SAALGSL----TRAPRVYVGGGGSHLNAGQIVTLSPEQARYLVSVMRLRDGSQVRVFDGVNGEFKAVV----------------RNVGKSR-----RAKRSTAKDTEQAELRIECLTRRQPTSSSVGEDGYPG--PPAVELMFAPIRKQRLKILVEKAVEVGASRLTPVLTARTQSSA-ADENTLGKLGMMTAVEAAEQCERMTVPHVGATPVPLASLLEDLEARHRDAASSGAAGTTREPGVVGHDCCESGTEDPVVAADVVFVCKERDVDAPPLLDALADYARA----RR-----NITGGRNG-AAFLIGPEGGFDEAEIRLLASCPLVQFVSLGPTVLRAETAAVYALSCWSAFWAS 403
            R LPPL   A     + AL  L    TRAPRVY+ G  ++L+ GQ V L+PEQ RYLVSVMRLRDGS VRVFDGVNGEF A V                  +G  R     R KRST    +  ELR+ECLTRRQP     G+        P +EL+FAPIRKQRLK+LVEKAVEVGASRLTPVLTARTQ  A +D + L +LG +TAVEAAEQCERMTVP V A+PV LAS L  LE R      S   G  R+ G              +   D+VFVCKERDVDAPPLL+ALA+Y +A    RR     +  G RN  AAFLIGPEGGFD  EI  LA  P V+FVSLG TVLRAETAAVYALS WSAFWAS
Sbjct:  115 RPLPPLGVPARIAGVNPALVPLPSPPTRAPRVYLNG--ANLHVGQTVQLTPEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVATSSSTSSSSRLERSGEKIGSGRGGRRGRGKRSTVGADKVVELRVECLTRRQPGIGGGGDGEVEDVDAPEIELVFAPIRKQRLKMLVEKAVEVGASRLTPVLTARTQKGAVSDASMLDRLGAVTAVEAAEQCERMTVPPV-ASPVTLASYLRSLELRQSSCDLSSIIGLARDRG------------GDLSLPDIVFVCKERDVDAPPLLEALAEYEQAFSEERRQDHVNSSDGSRNANAAFLIGPEGGFDPDEIGALAQYPFVRFVSLGRTVLRAETAAVYALSSWSAFWAS 474          
BLAST of mRNA_S-dermatodea_contig1320.1908.1 vs. uniprot
Match: D7G8G1_ECTSI (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8G1_ECTSI)

HSP 1 Score: 263 bits (672), Expect = 4.640e-82
Identity = 177/313 (56.55%), Postives = 197/313 (62.94%), Query Frame = 0
Query:  123 MRLRDGSQVRVFDGVNGEFKAVV--------------RNVGKSR-----RAKRSTAKDTEQAELRIECLTRRQPT--SSSVGEDGYPGPPAVELMFAPIRKQRLKILVEKAVEVGASRLTPVLTARTQSSA-ADENTLGKLGMMTAVEAAEQCERMTVPHVGATPVPLASLLEDLEARHRDAASSGAAGTTREPGVVGHDCCESGTEDPVVAADVVFVCKERDVDAPPLLDALADYARA----RR-----NITGGRNG-AAFLIGPEGGFDEAEIRLLASCPLVQFVSLGPTVLRAETAAVYALSCWSAFWAS 403
            MRLRDG+ VRVFDGVNGEF A V                +G  R     R KRS     +  ELR+ECLTRRQP       GE      P +EL+FAPIRKQRLK+LVEKAVEVGASRLTPVLTARTQ  A +D + L +LG +TAVEAAEQCERMTVP + A+PV LAS L  LE RH     S   G  R+           G        D+VFVCKERDVDAPPLL+ALA+Y +A    RR     +    RN  AAFLIGPEGGFD  EI  LA  P V+FVSLG TVLRAETAAVYALS WSAFWAS
Sbjct:    1 MRLRDGNPVRVFDGVNGEFLAAVATSSSSSSRLERSGEKIGSGRGGRRGRGKRSAGGAEKVIELRVECLTRRQPGIGGGGGGEVEDLDAPEIELVFAPIRKQRLKMLVEKAVEVGASRLTPVLTARTQKGAVSDASMLDRLGAVTAVEAAEQCERMTVPPM-ASPVTLASYLRSLELRHSSCDGSSIVGLARD---------RDGDRS---LPDIVFVCKERDVDAPPLLEALAEYEQAFSEQRRQDHVNSSDDNRNANAAFLIGPEGGFDPDEIGTLAQYPFVRFVSLGRTVLRAETAAVYALSSWSAFWAS 300          
BLAST of mRNA_S-dermatodea_contig1320.1908.1 vs. uniprot
Match: A0A835ZHN8_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHN8_9STRA)

HSP 1 Score: 161 bits (408), Expect = 2.050e-43
Identity = 119/292 (40.75%), Postives = 157/292 (53.77%), Query Frame = 0
Query:  123 MRLRDGSQVRVFDGVNGEFKAVVRNVGKSRRAK-----RSTAKDTEQAELRIECLTRRQPTSSSVGEDGYPGPPAVELMFAPIRKQRLKILVEKAVEVGASRLTPVLTARTQSSAADENTLGKLGMMTAVEAAEQCERMTVPHVGATPVPLASLLEDLEARHRDAASSGAAGTTREPGVVGHDCCESGTEDPVVAADVVFVCKERDVDAPPLLDALADYARARRNITGGRNGAAFLIGPEGGFDEAEIRLLASCPLVQFVSLGPTVLRAETAAVYALSCWSAFWASSRAEGG 409
            MRLRDGS VR F+G +GE+   +     S  +K     R +AK      L++E   R Q   S    D       V L+ API++QR+K+LVEKA E+G + + PVLTA TQ +   E T   L +  A+EAAEQCER+++PH+   P PL  LL    +                              +P   A  +FVC+ER   +PPLL+ALA  A A R +      AAFL+GPEGGF   E  +LA  P +Q VSLG TVLRAETAA+YALSC+S+F A++    G
Sbjct:    1 MRLRDGSTVRAFNGRDGEYLCTLSQTDGSSSSKPAGKGRRSAKPA--LALQVEQQLRSQAEDSCADLD-------VWLLCAPIKRQRMKLLVEKATELGVTCIAPVLTAHTQEALDAEGTSRLLPI--AIEAAEQCERLSLPHLH-PPAPLPELLARWHS------------------------------EPHTRARQLFVCQERSPQSPPLLEALA-AASAARGVPSSAAPAAFLVGPEGGFSADEREMLAGLPWIQGVSLGATVLRAETAALYALSCYSSFAAAAGGSSG 249          
BLAST of mRNA_S-dermatodea_contig1320.1908.1 vs. uniprot
Match: A0A7Y0HFA1_9PROT (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Pacificispira spongiicola TaxID=2729598 RepID=A0A7Y0HFA1_9PROT)

HSP 1 Score: 135 bits (340), Expect = 1.490e-33
Identity = 114/310 (36.77%), Postives = 150/310 (48.39%), Query Frame = 0
Query:  103 LNAGQIVTLSPEQARYLVSVMRLRDGSQVRVFDGVNGEFKAVVRNVGKSRRAKRSTAKDTEQAELRIECLTRRQPTSSSVGEDGYPGPPAVELMFAPIRKQRLKILVEKAVEVGASRLTPVLTARTQSSAADENTLGKLGMMTAVEAAEQCERMTVPHVGATPVPLASLLEDLEARHRDAASSGAAGTTREPGVVGHDCCESGTEDPVVAADVVFVCKERDVDAPPLLDALADYARARRNITGGRNGAAFLIGPEGGFDEAEIRLLASCPLVQFVSLGPTVLRAETAAVYALSCWSAFWASSRAEGGPPP 412
            L AG+ V   P+QA YL  V+RL  G+ + +F+G +GE+ AVV  +GK+R            A LR E   R Q +S           P V L FAP++K +   +V+KA E+G SRL P+LT RTQS     + L      TAVEAAEQCER+ VP V   P+ L  L++                T R                      ++++C E   DA PL  A                 AAF+ GPEGGF + E+ L+   PLVQ +SLGP +LRAETAA+ AL+ W A   S    G PPP
Sbjct:   13 LQAGRPVEADPDQAHYLSRVLRLGAGAPLVLFNGRDGEWDAVVTEIGKNR------------ATLRPETQRRAQVSS-----------PDVWLAFAPVKKTQTDFIVQKATELGVSRLIPILTDRTQSERVRTDRL----TATAVEAAEQCERLDVPVV-VEPIRLDRLIDTWP-------------TDR----------------------MLYLCAEAG-DAQPLASAAKPGP------------AAFVTGPEGGFSQQELDLMRRSPLVQPISLGPRILRAETAAMAALAVWQAV--SGDWGGRPPP 244          
BLAST of mRNA_S-dermatodea_contig1320.1908.1 vs. uniprot
Match: A0A1H4DH21_9RHOB (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Rubrimonas cliftonensis TaxID=89524 RepID=A0A1H4DH21_9RHOB)

HSP 1 Score: 132 bits (333), Expect = 1.770e-32
Identity = 115/304 (37.83%), Postives = 139/304 (45.72%), Query Frame = 0
Query:  103 LNAGQIVTLSPEQARYLVSVMRLRDGSQVRVFDGVNGEFKAVVRNVGKSRRAKRSTAKDTEQAELRIECLTRRQPTSSSVGEDGYPGPPAVELMFAPIRKQRLKILVEKAVEVGASRLTPVLTARTQSSAADENTLGKLGMMTAVEAAEQCERMTVPHVGATPVPLASLLEDLEARHRDAASSGAAGTTREPGVVGHDCCESGTEDPVVAADVVFVCKERDVDAPPLLDALADYARARRNITGGRNGAAFLIGPEGGFDEAEIRLLASCPLVQFVSLGPTVLRAETAAVYALSCWSAFWASSRA 406
            L  G  V L   QA YL +VMRL  G  V +F+G +GE++AV    G+   A            LR   L R Q              P ++L+FAPI+K R   + EKA E+GA RL P LT  T +   +   L       AVEAAEQCE ++VP V A P PLA+LL+  EA  R                                   + VC E   DAPP +DAL     A R    G    A LIGPEGGF   E   L+  P V  VSLGP VLRA+TAAV AL+ W A     RA
Sbjct:   16 LGDGAAVALERAQAHYLFTVMRLGQGDAVALFNGRDGEWRAVATEAGRKGGA------------LRCAALLRPQAEG-----------PDLDLIFAPIKKARTDFIAEKACEMGARRLIPCLTRFTNAERVNVERL----RAHAVEAAEQCEILSVPQVLA-PAPLAALLDAWEAGRR-----------------------------------LMVCDEAR-DAPPAMDALR---AAGREAGSGPGPWAVLIGPEGGFAPEERARLSEAPFVTRVSLGPRVLRADTAAVAALALWQAALGDWRA 252          
BLAST of mRNA_S-dermatodea_contig1320.1908.1 vs. uniprot
Match: A0A2E4XSR1_9PROT (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4XSR1_9PROT)

HSP 1 Score: 132 bits (332), Expect = 2.800e-32
Identity = 103/299 (34.45%), Postives = 143/299 (47.83%), Query Frame = 0
Query:  103 LNAGQIVTLSPEQARYLVSVMRLRDGSQVRVFDGVNGEFKAVVRNVGKSRRAKRSTAKDTEQAELRIECLTRRQPTSSSVGEDGYPGPPAVELMFAPIRKQRLKILVEKAVEVGASRLTPVLTARTQSSA--ADENTLGKLGMMTAVEAAEQCERMTVPHVGATPVPLASLLEDLEARHRDAASSGAAGTTREPGVVGHDCCESGTEDPVVAADVVFVCKERDVDAPPLLDALADYARARRNITGGRNGAAFLIGPEGGFDEAEIRLLASCPLVQFVSLGPTVLRAETAAVYALSCWSA 399
            L+AG+ V LS  Q+ YL  V+RL  G++V +F+G +GE++A +  + ++               L +E   R Q T            P + L+FAPI++ RL +LV+KAVE+G SRL PVLT RT+     AD +          +EAAEQCERMT+P +   P P+  +L D     R                                   + VC ER   A P+   L D        TG  +  A L GPEGGF E E+        ++FVSLGP +LRAETAA+ A++CW A
Sbjct:   17 LDAGRSVDLSANQSHYLKHVLRLGPGAEVALFNGKDGEWRARIETIRRNA------------GSLGVETQIRPQITE-----------PDLWLLFAPIKRARLDMLVQKAVELGVSRLVPVLTERTEVKRLNADRH------RSNLIEAAEQCERMTLPEI-VEPRPILDVLSDFPTGRR-----------------------------------LLVCAERG-HAAPINQILEDD-------TGEADRCAILCGPEGGFAETELDAFQKLSFIRFVSLGPRILRAETAAISAVTCWQA 242          
BLAST of mRNA_S-dermatodea_contig1320.1908.1 vs. uniprot
Match: A0A3D6A1M1_9PROT (Ribosomal RNA small subunit methyltransferase E n=2 Tax=Maricaulaceae TaxID=2800061 RepID=A0A3D6A1M1_9PROT)

HSP 1 Score: 132 bits (331), Expect = 3.710e-32
Identity = 116/314 (36.94%), Postives = 151/314 (48.09%), Query Frame = 0
Query:   88 LTRAPRVYVGGGGSHLNAGQIVTLSPEQARYLVSVMRLRDGSQVRVFDGVNGEFKAVVRNVGKSRRAKRSTAKDTEQAELRIECLTRRQPTSSSVGEDGYPGPPAVELMFAPIRKQRLKILVEKAVEVGASRLTPVLTARTQSSAADENTLGKLGMMTAVEAAEQCERMTVPHVGATPVPLASLLEDLEARHR----DAASSGAAGTTREPGVVGHDCCESGTEDPVVAADVVFVCKERDVDAPPLLDALADYARARRNITGGRNGAAFLIGPEGGFDEAEIRLLASCPLVQFVSLGPTVLRAETAAVYALSCW 397
            +   PR+YV    + L+ G  + L  EQA YLV+VMR   GS VRVF+G +GE++AVV +  +            + A L++E   R Q            G P + L FAP++K R   +VEKA E+GA+ + PV+T RTQS     + L    M  A EAAEQ ER+ +P V   PV L  LL D    HR    D A  G        G                              A P+LD L    RA  + +G       LIGPEGGFD+AE   L S P V+ V+LGP +LRA+TAAV AL+ W
Sbjct:    1 MVTTPRLYVD---APLDDGAELILPREQAHYLVNVMRREAGSPVRVFNGRDGEWQAVVADASR------------KGASLQVETRLREQV-----------GVPPLRLCFAPVKKARTDFIVEKATELGAAVIQPVITRRTQSERVRTDRL----MALATEAAEQTERLCLPVVS-EPVTLERLLADWPEDHRLIFCDEAGDGEGAWGGPQG-----------------------------RARPMLDVL----RAEPDPSGPWT---VLIGPEGGFDDAERARLRSLPFVRAVTLGPRILRADTAAVAALTLW 247          
BLAST of mRNA_S-dermatodea_contig1320.1908.1 vs. uniprot
Match: UPI001F5B5D51 (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Rhodovibrio sodomensis TaxID=1088 RepID=UPI001F5B5D51)

HSP 1 Score: 132 bits (331), Expect = 4.870e-32
Identity = 115/306 (37.58%), Postives = 147/306 (48.04%), Query Frame = 0
Query:  103 LNAGQIVTLSPEQARYLVSVMRLRDGSQVRVFDGVNGEFKAVVRNVGKSRRAKRSTAKDTEQAELRIECLTRRQPTSSSVGEDGYPGPPAVELMFAPIRKQRLKILVEKAVEVGASRLTPVLTARTQSSAADENTLGKLGMMTAVEAAEQCERMTVPHVGATPVPLASLLEDLEA-RHRDAASSGAAGTTREPGVVGHDCCESGTEDPVVAADVVFVCKERDVDAPPLLDALADYARARRNITGGRNGA-------AFLIGPEGGFDEAEIRLLASCPLVQFVSLGPTVLRAETAAVYALSCWSAF 400
            L AGQ V L+P+QA YL +V+RL  G+ + +F+G +GE++A +  +GK              A L +    R Q              P V L+FAPI++ RL  LVEKA E+GA+RL PV T  T  S  +   L         EAAEQCER++VP V A P  L  LL D  A RH   A+                  ESG                    APP+ +ALA   RAR    GGR G        A L+GPEGGF EAE+  L+  P V    LGP VLRA+TA +  L+CW A+
Sbjct:   18 LGAGQTVGLAPQQAHYLRTVLRLSTGADLALFNGRDGEWRARIDALGKG------------WASLAVIDQRRAQQPE-----------PDVWLVFAPIKRARLDFLVEKACELGAARLLPVFTQNTDVSRVNCERL----RANCREAAEQCERLSVPEV-AEPTGLRDLLADWPADRHLLVAA------------------ESG-------------------HAPPVAEALA---RAREQA-GGRAGVPASAAPWAVLVGPEGGFTEAELDALSKLPFVTAAGLGPRVLRADTAGIALLACWQAW 254          
BLAST of mRNA_S-dermatodea_contig1320.1908.1 vs. uniprot
Match: A0A4R3J6Z2_9PROT (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Varunaivibrio sulfuroxidans TaxID=1773489 RepID=A0A4R3J6Z2_9PROT)

HSP 1 Score: 130 bits (328), Expect = 1.380e-31
Identity = 111/294 (37.76%), Postives = 142/294 (48.30%), Query Frame = 0
Query:  103 LNAGQIVTLSPEQARYLVSVMRLRDGSQVRVFDGVNGEFKAVVRNVGKSRRAKRSTAKDTEQAELRIECLTRRQPTSSSVGEDGYPGPPAVELMFAPIRKQRLKILVEKAVEVGASRLTPVLTARTQSSAADENTLGKLGMMTAVEAAEQCERMTVPHVGATPVPLASLLEDLEARHRDAASSGAAGTTREPGVVGHDCCESGTEDPVVAADVVFVCKERDVDAPPLLDALADYARARRNITGGRNGAAFLIGPEGGFDEAEIRLLASCPLVQFVSLGPTVLRAETAAVYALSC 396
            L AG  V L  EQ+ YL +VMR    + V +F+G +GE+   +  +GK            E A LR     RR+P               V L+FAP++K RL  LVEK+VE+G SRL+PV+T  T     +   L       A EAAEQCER+T+P V A P+ LA LL+  E               R P                V A  +F   ER + APP+  AL + A  +          AFLIGPEGGF   E+ LL   P V  VSLGP +LRAETAA+ AL+C
Sbjct:   21 LTAGARVALDHEQSHYLKNVMRAGKNAPVALFNGRDGEWLGELAALGKHH---------GEVAILRQMHGQRREPN--------------VRLIFAPLKKARLDFLVEKSVELGVSRLSPVITRHTDVGRVNVARL----RAQAREAAEQCERLTLPTVDA-PIALAQLLDQWE---------------RLP----------------VGAPPLFAAVER-LSAPPIAQALQNVAEVQER--------AFLIGPEGGFSRDEVALLDKAPFVFPVSLGPRILRAETAALVALAC 246          
BLAST of mRNA_S-dermatodea_contig1320.1908.1 vs. uniprot
Match: A0A0P7V371_9PROT (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Oceanicaulis sp. HLUCCA04 TaxID=1666904 RepID=A0A0P7V371_9PROT)

HSP 1 Score: 129 bits (325), Expect = 2.700e-31
Identity = 113/312 (36.22%), Postives = 152/312 (48.72%), Query Frame = 0
Query:   88 LTRAPRVYVGGGGSHLNAGQIVTLSPEQARYLVSVMRLRDGSQVRVFDGVNGEFKAVVRNVGKSRRAKRSTAKDTEQAELRIECLTRRQPTSSSVGEDGYPGPPAVELMFAPIRKQRLKILVEKAVEVGASRLTPVLTARTQSSAADENTLGKLGMMTAVEAAEQCERMTVPHVGATPVPLASLLEDLEARHRDAASSGAAGTTREPGVVGHDCCESGTEDPVVAADVVFVCKERDVDAPPLLDALADYARARRNITGGRNGAAFLIGPEGGFDEAEIRLLASCPLVQFVSLGPTVLRAETAAVYALSCWSA 399
            ++  PR++V    + L  G  +TL  EQA YL++VMR   G+ VR+F+G +GE++AVV    +            + A L +E   R Q            G P + L FAP++K R   +VEKA E+GAS + PV+T RTQS     + L    M  A EA EQ ER+ +P V   PV L  LL D     R               V+   C ESG  +              +  A P+LD L    +A  + +G     A LIGPEGGFDE E   L S   V+ V+LGP +LRA+TAAV AL+ W A
Sbjct:    1 MSTTPRLFVD---APLAEGAHITLPREQAHYLINVMRRETGAPVRIFNGRDGEWQAVVSEASR------------KSAVLAVESRLREQT-----------GVPPLRLCFAPVKKSRTDFIVEKATELGASAIQPVITRRTQSERVRTDRL----MALATEATEQTERLCLPDVS-EPVTLERLLADWPQGER---------------VI--FCDESGEGEGAWGGP--------EGRARPMLDVL----QAEPDPSGSW---AILIGPEGGFDEHERAHLRSLSFVRAVTLGPRILRADTAAVTALALWQA 249          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1320.1908.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9Y9_9PHAE2.620e-9756.0016S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
D7G8G1_ECTSI4.640e-8256.5516S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
A0A835ZHN8_9STRA2.050e-4340.7516S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
A0A7Y0HFA1_9PROT1.490e-3336.77Ribosomal RNA small subunit methyltransferase E n=... [more]
A0A1H4DH21_9RHOB1.770e-3237.83Ribosomal RNA small subunit methyltransferase E n=... [more]
A0A2E4XSR1_9PROT2.800e-3234.45Ribosomal RNA small subunit methyltransferase E n=... [more]
A0A3D6A1M1_9PROT3.710e-3236.94Ribosomal RNA small subunit methyltransferase E n=... [more]
UPI001F5B5D514.870e-3237.5816S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
A0A4R3J6Z2_9PROT1.380e-3137.76Ribosomal RNA small subunit methyltransferase E n=... [more]
A0A0P7V371_9PROT2.700e-3136.22Ribosomal RNA small subunit methyltransferase E n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006700Ribosomal RNA small subunit methyltransferase EPFAMPF04452Methyltrans_RNAcoord: 109..280
e-value: 3.1E-22
score: 79.0
coord: 340..398
e-value: 1.5E-14
score: 53.9
IPR006700Ribosomal RNA small subunit methyltransferase ETIGRFAMTIGR00046TIGR00046coord: 349..399
e-value: 2.6E-11
score: 41.3
IPR006700Ribosomal RNA small subunit methyltransferase EPANTHERPTHR30027RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE Ecoord: 92..401
IPR029026tRNA (guanine-N1-)-methyltransferase, N-terminalGENE3D3.40.1280.10coord: 306..404
e-value: 2.9E-17
score: 64.7
coord: 188..296
e-value: 7.4E-14
score: 53.7
NoneNo IPR availableGENE3D2.40.240.20coord: 93..161
e-value: 9.9E-14
score: 52.7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..420
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.823
IPR029028Alpha/beta knot methyltransferasesSUPERFAMILY75217alpha/beta knotcoord: 189..274
IPR029028Alpha/beta knot methyltransferasesSUPERFAMILY75217alpha/beta knotcoord: 338..401
IPR015947PUA-like superfamilySUPERFAMILY88697PUA domain-likecoord: 92..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1320contigS-dermatodea_contig1320:1838..3361 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1320.1908.1mRNA_S-dermatodea_contig1320.1908.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1320 1754..3526 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1320.1908.1 ID=prot_S-dermatodea_contig1320.1908.1|Name=mRNA_S-dermatodea_contig1320.1908.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=421bp
MVRGWCLLLSFLVPLVRQSIGFCLVAPGEWRVGSRVRNETKRTKHSDSSV
KSVGGEAEIANSPAAHHDTRQRELPPLSEDASAALGSLTRAPRVYVGGGG
SHLNAGQIVTLSPEQARYLVSVMRLRDGSQVRVFDGVNGEFKAVVRNVGK
SRRAKRSTAKDTEQAELRIECLTRRQPTSSSVGEDGYPGPPAVELMFAPI
RKQRLKILVEKAVEVGASRLTPVLTARTQSSAADENTLGKLGMMTAVEAA
EQCERMTVPHVGATPVPLASLLEDLEARHRDAASSGAAGTTREPGVVGHD
CCESGTEDPVVAADVVFVCKERDVDAPPLLDALADYARARRNITGGRNGA
AFLIGPEGGFDEAEIRLLASCPLVQFVSLGPTVLRAETAAVYALSCWSAF
WASSRAEGGPPPGNKNAAQE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006700rRNA_ssu_MeTrfase-E
IPR029026tRNA_m1G_MTases_N
IPR029028Alpha/beta_knot_MTases
IPR015947PUA-like_sf