prot_S-dermatodea_contig13188.1902.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig13188.1902.1
Unique Nameprot_S-dermatodea_contig13188.1902.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length255
Homology
BLAST of mRNA_S-dermatodea_contig13188.1902.1 vs. uniprot
Match: D7G2G9_ECTSI (Similar to Chalcone Isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2G9_ECTSI)

HSP 1 Score: 259 bits (661), Expect = 7.320e-84
Identity = 136/220 (61.82%), Postives = 171/220 (77.73%), Query Frame = 0
Query:   38 CLTTSRGSPATTGSQPPTPDPKELKDHATGLTLPRKKRF--SKGDLVCLGVGVRAKSIAVVKVNVYTVGLYVDPKGARGPLKKFAGSDPAELRQDVSLFKALGQAG-FTKYLHLVFARSVGAQQVVDALTSVKGVSEEALSRFSSIMLEAVGKNVGKGETVSLGWEGKDKLVILVRDKPAGTVVDAALPKAIFDLYLGSSPVSREAKAAFAEGVPALLSS 254
            CLTTS    A     P +PD   ++D ATGL LPR K+F  SK  LVCLGVGVR KS+A V VNVYTVGLYV+PKGAR  LK +AG DP EL +D S+++ LG AG F+KYLHLVFARSVGAQ+VVDA T+VKGV+++ L +FSS+ +E VGK++ + E+V+LGWEGKD+LV+LVRDK  G+V+D +LP ++F+L+LGS PVS  AK AFAEGVPA L+S
Sbjct:   13 CLTTSYAKAAGLAKTPLSPD---VRDPATGLVLPRTKQFASSKTGLVCLGVGVRVKSVAFVNVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSINREESVTLGWEGKDRLVVLVRDKEIGSVIDESLPASVFNLFLGSDPVSPVAKTAFAEGVPAFLAS 229          
BLAST of mRNA_S-dermatodea_contig13188.1902.1 vs. uniprot
Match: A0A6H5KHX0_9PHAE (FAPb protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHX0_9PHAE)

HSP 1 Score: 249 bits (637), Expect = 1.350e-78
Identity = 128/203 (63.05%), Postives = 162/203 (79.80%), Query Frame = 0
Query:   55 TPDPKELKDHATGLTLPRKKRF--SKGDLVCLGVGVRAKSIAVVKVNVYTVGLYVDPKGARGPLKKFAGSDPAELRQDVSLFKALGQAG-FTKYLHLVFARSVGAQQVVDALTSVKGVSEEALSRFSSIMLEAVGKNVGKGETVSLGWEGKDKLVILVRDKPAGTVVDAALPKAIFDLYLGSSPVSREAKAAFAEGVPALLSS 254
            TP   +++D ATGL LPR K+F  SK  LVCLGVGVR KS+A V VNVYTVGLYV+PKGAR  LK +AG DP EL +D S+++ LG AG F+KYLHLVFARSVGAQ+VVDA T+VKGV+++ L +FSS+ +E VGK++ + E+V+LGWEGKD+LV+LVRDK  G+++D ALP ++F L+LGS PVS  AK AFAEGVP  L+S
Sbjct:  145 TPLSPDVRDPATGLVLPRTKQFASSKTGLVCLGVGVRVKSVAFVTVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSIDREESVTLGWEGKDRLVVLVRDKEIGSIIDEALPASVFSLFLGSDPVSPVAKTAFAEGVPPFLAS 347          
BLAST of mRNA_S-dermatodea_contig13188.1902.1 vs. uniprot
Match: A0A0G4GWT2_9ALVE (Chalcone_isomerase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GWT2_9ALVE)

HSP 1 Score: 164 bits (414), Expect = 1.520e-46
Identity = 94/190 (49.47%), Postives = 124/190 (65.26%), Query Frame = 0
Query:   61 LKDHATGLTLPRKKRF-SKGDLVCLGVGVRAKSI-AVVKVNVYTVGLYVDPKGARGPLKKFAGSDPAELRQDVSLFKALGQAGFTKYLHLVFARSVGAQQVVDALTSVKGVSEEALSRFSSIMLEAVGKNVGKGETVSLGWEGKDKLVILVRDKPAGTVVDAALPKAIFDLYLGSSPVSREAKAAFAEGV 248
            L D ATGL       F S   +  LG GVRAK++   + VNVY+VGLYV+P  AR  L  F   + AEL +    +KAL +    K +HL FARSVGA ++V+ALTS+ GV EE+LS+FS ++L+++G ++G  ETV+L     D L ++VR K AG+V D+ LPKA FDLYLG +PVS EAK AFA  V
Sbjct:   36 LTDAATGLDFETDVSFPSSPKMTLLGAGVRAKALLGPIAVNVYSVGLYVEPSKARQTLSGFKTIEEAELAKKEDFYKALMKEDLPKAMHLKFARSVGASKIVEALTSLNGVPEESLSKFSKLLLDSIGSSIGYKETVTLSSSKPDTLDVIVRGKHAGSVRDSKLPKAFFDLYLGKNPVSSEAKKAFASRV 225          
BLAST of mRNA_S-dermatodea_contig13188.1902.1 vs. uniprot
Match: A0A0G4GUV1_VITBC (Chalcone_isomerase domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GUV1_VITBC)

HSP 1 Score: 163 bits (412), Expect = 1.630e-46
Identity = 88/194 (45.36%), Postives = 120/194 (61.86%), Query Frame = 0
Query:   61 LKDHATGLTLPRKKRF-SKGDLVCLGVGVRAKSIAVVKVNVYTVGLYVDPKGARGPLKKFAGSDPAELRQDVSLFKALGQAGFTKYLHLVFARSVGAQQVVDALTSVKGVSEEALSRFSSIMLEAVGKNVGKGETVSLGWEGKDKLVILVRDKPAGTVVDAALPKAIFDLYLGSSPVSREAKAAFAEGVPALLS 253
            LKD  TG+  P +  F     +  LG G R K++ + KVNVY+VGLYV+PK A   L  F G     L  D   +  L      K + L FAR+VGA +V DAL++VKGV  E +S F S++ + +G ++ K ET+++GW    +L +L+R +PAGTVVDA LPKA F+LYLG +PVS EAK AF + V +L S
Sbjct:    9 LKDKVTGIEFPCEATFPGTPKMTLLGAGPRRKNLGIAKVNVYSVGLYVEPKEAAKALSSFKGESEESLMNDDRFYDTLLGKEVPKLVLLKFARTVGAHKVADALSAVKGVEPEVVSEFCSLLEKGMGASIKKAETIAMGWTEDQRLDVLIRGQPAGTVVDAKLPKAFFELYLGKTPVSMEAKHAFVKRVASLFS 202          
BLAST of mRNA_S-dermatodea_contig13188.1902.1 vs. uniprot
Match: A0A6S9GES1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GES1_HETAK)

HSP 1 Score: 148 bits (373), Expect = 4.600e-39
Identity = 83/197 (42.13%), Postives = 114/197 (57.87%), Query Frame = 0
Query:   56 PDPKELKDHATGLTLPRKKRFSKGDLVCLGVGVRAKSIAVVKVNVYTVGLYVDPKGARGPLKKFAGSDPAELRQDVSLFKALGQAGFTKYLHLVFARSVGAQQVVDALTSVKGVSEEALSRFSSIMLEAVGKNVGKGETVSLGWEGKDKLVILVRDKPAGTVVDAALPKAIFDLYLGSSPVSREAKAAFAEGVPALL 252
            P    L D ATG+     K F    L  +G GVRAK++ V  VNVY+V LYVD   A   L  + G+          +F  L    F K ++L FAR VG+Q+++DALT+V+GV    L  FS+++L A+G  +G  ET++LG++    + + VR+  AGTV DA L  A+F LYLG+SPVS+ AK AF  GV  L 
Sbjct:  160 PGATSLTDDATGIAFDGVKAFGGAKLAAVGAGVRAKNLGVAMVNVYSVCLYVDKPKAAKALATYKGNPGP------GVFDVLMAKNFNKVMYLKFARGVGSQKIIDALTAVEGVPAATLDEFSALLLGAMGGQIGASETIALGFDASGSMSVYVREALAGTVADATLAPAVFKLYLGASPVSQPAKDAFGAGVQTLF 350          
BLAST of mRNA_S-dermatodea_contig13188.1902.1 vs. uniprot
Match: A0A7S2UYK7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYK7_9STRA)

HSP 1 Score: 134 bits (337), Expect = 2.520e-35
Identity = 74/174 (42.53%), Postives = 101/174 (58.05%), Query Frame = 0
Query:   60 ELKDHATGLTLPRKKRFSKGD----LVCLGVGVRAKS-IAVVKVNVYTVGLYVDPKGARGPLKKFAGSDPAELRQDVSLFKALGQAGFTKYLHLVFARSVGAQQVVDALTSVKGVSEEALSRFSSIMLEAVGKNVGKGETVSLGWEGKDKLVILVRDKPAGTVVDAALPKAIFD 228
            ++ +  TG+  P  K FS       L   GVGVR K+ +  +KVNVY +GLYVDP  A     K+ G D  E+ +D   FK L   GF K +++ +AR+VG  +VVDAL  V      AL  F  +++   G  +G  ET++LGWEGKDKLV+ VRDK  GTV  A L +A+F+
Sbjct:   30 KVTEPVTGIDFPVTKSFSLNSTSPTLTLTGVGVRVKALVGPLKVNVYGMGLYVDPSRAARAFSKYKGKDAKEVAKDDDFFKILHSPGFAKAIYIDYARAVGVDKVVDALRLVPTEDTAALDYFCDLLVIGTGSTIGNRETMTLGWEGKDKLVVQVRDKTVGTVTSAKLVEAVFE 203          
BLAST of mRNA_S-dermatodea_contig13188.1902.1 vs. uniprot
Match: W7TMS0_9STRA (Chalcone isomerase-like protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMS0_9STRA)

HSP 1 Score: 141 bits (356), Expect = 5.000e-35
Identity = 89/252 (35.32%), Postives = 130/252 (51.59%), Query Frame = 0
Query:    4 RQVNSLAVAAAFALFAMFLFCARDEHGTWRNDYSCLTTSRGSPATTGSQPPTPDPKELKDHATGLTLPRKKRFSKG----DLVCLGVGVRAKSIAVVKVNVYTVGLYVDPKGARGPLKKFAGSDPAELRQDVSLFKALGQ--AGFTKYLHLVFARSVGAQQVVDALTSVKGVSEEALSRFSSIMLEAVGKNVGKGETVSLGWEGKDKLVILVRDKPAGTVVDAALPKAIFDLYLGSSPVSREAKAAFAEGVP 249
            R + + +     ALF   L C  D +G   ND +C                    KE+ D  TGL  P  +    G    +L  LGVG R K++ VV+VNVY VGLY++     G LK F G     L ++   +  L +  +G  + L+L+FAR+V A ++V+AL +V GV +E ++ F   +L A+G ++ + ET++L W   D+L + VRDKP  T     L + IF+LYLG  P+S EAK  FA   P
Sbjct:  362 RNIMARSCIFRLALFCAILLCLSDGYGKTSND-TCEVKG----------------KEVVDKVTGLVFPMHRILPHGGRGRELTLLGVGPRRKNLFVVEVNVYAVGLYLETS-LLGRLKAFRGKSSEALAKEAKYYATLMKEGSGLNRALYLIFARTVPAGKIVEALAAVDGVKKEVMADFKKSLLAAIGSSLKEKETLTLAWTPDDRLSLFVRDKPVKTFPSLELARGIFNLYLGEKPISPEAKKGFAAVAP 595          
BLAST of mRNA_S-dermatodea_contig13188.1902.1 vs. uniprot
Match: A0A7S1JL13_9ALVE (Hypothetical protein n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1JL13_9ALVE)

HSP 1 Score: 125 bits (314), Expect = 1.600e-32
Identity = 67/147 (45.58%), Postives = 92/147 (62.59%), Query Frame = 0
Query:  107 VDPKGARGPLKKFAGSDPAELRQDVSLFKALGQAGFTKYLHLVFARSVGAQQVVDALTSVKGVSEEALSRFSSIMLEAVGKNVGKGETVSLGWEGKDKLVILVRDKPAGTVVDAALPKAIFDLYLGSSPVSREAKAAFAEGVPALLS 253
            V+PK A   L  F G     L  D   +  L      K + L FAR+VGA +V DAL++VKGV  E +S F S++ + +G ++ K ET+++GW    +L +L+R +PAGTVVDA LPKA F+LYLG +PVS EAK AF + V +L S
Sbjct:    1 VEPKEASKALSSFKGESEESLMNDDRFYDTLLGKEVPKLVLLKFARTVGAHKVADALSAVKGVEPEVVSEFCSLLEKGMGASIKKAETIAMGWTEDQRLDVLIRGQPAGTVVDAKLPKAFFELYLGKTPVSMEAKHAFVKRVASLFS 147          
BLAST of mRNA_S-dermatodea_contig13188.1902.1 vs. uniprot
Match: A0A835Z7E7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7E7_9STRA)

HSP 1 Score: 124 bits (310), Expect = 8.820e-30
Identity = 77/196 (39.29%), Postives = 109/196 (55.61%), Query Frame = 0
Query:   60 ELKDHATGLTL-PRKKRFSKGDLVCLGVGVRAKSIAVVK-VNVYTVGLYVDPKGARGPLKKFAGSDPAELRQDVSLFKALGQAG-FTKYLHLVFARSVGAQQVVDALTSVKGVSEEALSRFSSIMLEAVG-KNVGKGETVSLGWEGKDKLVILVRDKPAGTVVDAALPKAIFDLYLGSSPVSREAKAAFAEGVPAL 251
            +L + ATG+ L P         L C+G+GVR   +     V+VY +GLY+D  GAR  LK F      +L Q    + AL + G FT+Y+ L F R V   +V DALT+V+GV    +  +  ++  A+G K    G+T++LG+EGKD+LV++   K  G V    LP A+F LYLG  P+   AK A A+GV  L
Sbjct:  153 DLVEPATGIVLWPTDSFNGSPPLTCVGLGVRTVPVLYFSSVHVYVMGLYIDAVGARKALKAFLPLPAEDLAQKPEFYSALLKPGVFTRYIVLAFNRKVSTLKVADALTAVEGVPPPIVDAYRRLLEGALGEKGARPGDTLALGFEGKDRLVVVANGKTHGAVRSTVLPAAVFKLYLGDDPIIPAAKRAVADGVAKL 348          
BLAST of mRNA_S-dermatodea_contig13188.1902.1 vs. uniprot
Match: A0A835ZLC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLC9_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.650e-24
Identity = 64/137 (46.72%), Postives = 82/137 (59.85%), Query Frame = 0
Query:  140 AGFTKYLHLVFARSVGAQQVVDALTSVKGVSEEALSRFSSIMLEAVGKNVGKGETVSLGWEGKDKLVILVRDKPAGTVVDAALPKAIF------------------------DLYLGSSPVSREAKAAFAEGVPALL 252
            A + +YL L FAR V A +V DALT+V+GV+ + L  F+ ++  A+G  V  G+T++LGWEGKD+LV++VR K AG V DAALP AIF                         LYLGS PVS  AKAAFA GV A+ 
Sbjct:  294 AAYPRYLLLSFARDVSAAKVTDALTAVQGVAPDVLKAFAHLLGSAIGGAVHAGDTIALGWEGKDRLVVVVRGKKAGEVKDAALPGAIFKRSVMPISDARPFCRCALLPPLRAQLYLGSDPVSPPAKAAFASGVSAIF 430          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13188.1902.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2G9_ECTSI7.320e-8461.82Similar to Chalcone Isomerase n=1 Tax=Ectocarpus s... [more]
A0A6H5KHX0_9PHAE1.350e-7863.05FAPb protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A0G4GWT2_9ALVE1.520e-4649.47Chalcone_isomerase domain-containing protein n=1 T... [more]
A0A0G4GUV1_VITBC1.630e-4645.36Chalcone_isomerase domain-containing protein n=2 T... [more]
A0A6S9GES1_HETAK4.600e-3942.13Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2UYK7_9STRA2.520e-3542.53Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
W7TMS0_9STRA5.000e-3535.32Chalcone isomerase-like protein n=2 Tax=Nannochlor... [more]
A0A7S1JL13_9ALVE1.600e-3245.58Hypothetical protein n=1 Tax=Vitrella brassicaform... [more]
A0A835Z7E7_9STRA8.820e-3039.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZLC9_9STRA1.650e-2446.72Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016089Chalcone isomerase, orthogonal bundle domain superfamilyGENE3D1.10.890.20coord: 112..247
e-value: 1.5E-35
score: 124.7
IPR016087Chalcone isomerasePFAMPF16036Chalcone_3coord: 66..243
e-value: 6.8E-12
score: 45.8
IPR016088Chalcone isomerase, 3-layer sandwichGENE3D3.50.70.10coord: 77..230
e-value: 1.5E-35
score: 124.7
NoneNo IPR availablePANTHERPTHR47698FAMILY NOT NAMEDcoord: 58..252
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..254
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.69
NoneNo IPR availableTMHMMTMhelixcoord: 7..24
IPR036298Chalcone isomerase superfamilySUPERFAMILY54626Chalcone isomerasecoord: 74..253

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13188contigS-dermatodea_contig13188:5239..6649 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13188.1902.1mRNA_S-dermatodea_contig13188.1902.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig13188 4750..6661 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig13188.1902.1 ID=prot_S-dermatodea_contig13188.1902.1|Name=mRNA_S-dermatodea_contig13188.1902.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=255bp
MPSRQVNSLAVAAAFALFAMFLFCARDEHGTWRNDYSCLTTSRGSPATTG
SQPPTPDPKELKDHATGLTLPRKKRFSKGDLVCLGVGVRAKSIAVVKVNV
YTVGLYVDPKGARGPLKKFAGSDPAELRQDVSLFKALGQAGFTKYLHLVF
ARSVGAQQVVDALTSVKGVSEEALSRFSSIMLEAVGKNVGKGETVSLGWE
GKDKLVILVRDKPAGTVVDAALPKAIFDLYLGSSPVSREAKAAFAEGVPA
LLSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016089Chalcone_isomerase_bundle_sf
IPR016087Chalcone_isomerase
IPR016088Chalcone_isomerase_3-sand
IPR036298Chalcone_isomerase_sf