mRNA_S-dermatodea_contig13173.1897.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig13173.1897.1
Unique NamemRNA_S-dermatodea_contig13173.1897.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig13173.1897.1 vs. uniprot
Match: V5K3Y9_SACJA (Trehalose-6-phosohate synthase n=1 Tax=Saccharina japonica TaxID=88149 RepID=V5K3Y9_SACJA)

HSP 1 Score: 410 bits (1053), Expect = 5.850e-132
Identity = 193/217 (88.94%), Postives = 202/217 (93.09%), Query Frame = 1 
Query:    1 DTGGRWMVEWDYESLLSLHSAEIDMRVTRVGCVRYLDGINGEEEEAVAKALEPFSCVPVFLDKALTTKFYRDFCKGVLWPVFHHVVDVYGDLVMRFFTQDTLADLWQCYANVNRKFRDKIVEVYNEGDMVWVHGFHLLLLPSFLTRVLRTARVGLFLHTPFPSSEIFRTLPFREDLLRGMLNADQIGFHLFEYSRHFLTCCKRILGLNEGDSNNRGD 651
            D  G W+VEWDYESLLSLHSA IDMRVTRVG +RY DG+  EEEEAVAKAL PFSCVPVFL+++L  KFYRDFCKGVLWPVFHHVVDVYGD VMRFF QD LADLWQ YANVNR+FRDKIVEVYNEGDMVWVHGFHLLLLPSFLTRVLRTARVGLFLHTPFPSSEIFRTLPFREDLLRGMLNADQIGFHLFEY+RHFLTCCKRILGLNEGDSNNRG+
Sbjct:  189 DIDGNWVVEWDYESLLSLHSASIDMRVTRVGFLRYADGVKPEEEEAVAKALLPFSCVPVFLERSLAQKFYRDFCKGVLWPVFHHVVDVYGDQVMRFFAQDVLADLWQAYANVNRRFRDKIVEVYNEGDMVWVHGFHLLLLPSFLTRVLRTARVGLFLHTPFPSSEIFRTLPFREDLLRGMLNADQIGFHLFEYARHFLTCCKRILGLNEGDSNNRGN 405
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BLAST of mRNA_S-dermatodea_contig13173.1897.1 vs. uniprot
Match: D7FL73_ECTSI (Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL73_ECTSI)

HSP 1 Score: 317 bits (813), Expect = 1.330e-97
Identity = 154/217 (70.97%), Postives = 164/217 (75.58%), Query Frame = 1 
Query:    1 DTGGRWMVEWDYESLLSLHSAEIDMRVTRVGCVRYLDGINGEEEEAVAKALEPFSCVPVFLDKALTTKFYRDFCKGVLWPVFHHVVDVYGDLVMRFFTQDTLADLWQCYANVNRKFRDKIVEVYNEGDMVWVHGFHLLLLPSFLTRVLRTARVGLFLHTPFPSSEIFRTLPFREDLLRGMLNADQIGFHLFEYSRHFLTCCKRILGLNEGDSNNRGD 651
            D GGRW+VEWDYESLLSLHS ++DMR                                                 G+LWPVFHHVVDVYGD VMRFFTQDT+ADLWQCYANVNR+FRDKIVEVYNEGDM+WVHGFHLLLLPSFLTRVLRTARVGLFLHTPFPSSEIFRTLPFREDLLRGMLNADQIGFHLFEY+RHF+TCCKRILGLNEGDS NRG+
Sbjct:  198 DEGGRWVVEWDYESLLSLHSTDVDMR-------------------------------------------------GILWPVFHHVVDVYGDQVMRFFTQDTMADLWQCYANVNRRFRDKIVEVYNEGDMIWVHGFHLLLLPSFLTRVLRTARVGLFLHTPFPSSEIFRTLPFREDLLRGMLNADQIGFHLFEYARHFITCCKRILGLNEGDSTNRGN 365
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BLAST of mRNA_S-dermatodea_contig13173.1897.1 vs. uniprot
Match: A0A835YZM5_9STRA (Glycosyltransferase family 20-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZM5_9STRA)

HSP 1 Score: 291 bits (745), Expect = 2.000e-87
Identity = 167/350 (47.71%), Postives = 187/350 (53.43%), Query Frame = 1 
Query:   10 GRWMVEWDYESLLSLHSAEIDMRVTRVGC----------------------VRYLDGINGEEEEAVAKALEPFSCVPVFLDKALTTKFYRDFCK-------------------------------GVLWPVFHHVVDVYGDLVMRFFTQDTLADLWQCYANVNRKFRDKIVEVYNEGDMVW-------------------------------------------------------------------------------------VHGFHLLLLPSFLTRVLRTARVGLFLHTPFPSSEIFRTLPFREDLLRGMLNADQIGFHLFEYSRHFLTCCKRILGLNEGDSNNR 645
            G W VEWD E+LLSLHS+ + +RVTRVG                       VR +  + G++EE +AKAL PF CVPVFL+++L+ KFYRDFCK                               G+LWPVFHHVVDVYGDLVM+FFTQ  L DLWQCY  VNR+FRDKIVEVYNEGD++                                                                                      VHGFHLLLLPSFLTRVLR AR+GLFLHTPFPSSEIFRTLPFREDLLRGMLNADQIGFHLFEYSRHFLTCC+RILGLNEG    R
Sbjct:  277 GGWSVEWDCENLLSLHSSTMPLRVTRVGIDYXXXXXXXXXXXXXXXXXXXIVRGVGALAGDDEETLAKALVPFDCVPVFLERSLSRKFYRDFCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGILWPVFHHVVDVYGDLVMKFFTQ--LKDLWQCYTTVNRRFRDKIVEVYNEGDLIXXXXXXXXXXXXXXXXXXXXXXXXXVSVLQRRAALSRHDPPRAAXXXXXXXXXRHEPRARHRNAAAPLPYAKRAIVVGGVGATCLQVHGFHLLLLPSFLTRVLRVARIGLFLHTPFPSSEIFRTLPFREDLLRGMLNADQIGFHLFEYSRHFLTCCRRILGLNEGAEAGR 624
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BLAST of mRNA_S-dermatodea_contig13173.1897.1 vs. uniprot
Match: A0A7S3XSU4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSU4_HETAK)

HSP 1 Score: 270 bits (690), Expect = 4.480e-86
Identity = 134/209 (64.11%), Postives = 161/209 (77.03%), Query Frame = 1 
Query:    7 GGR-WMVEWDYESLLSLHSAEIDMRVTRVGCVRYLDG---INGEEEEAVAKALEPFSCVPVFLDKALTTKFYRDFCKGVLWPVFHHVVDVYGDLVMRFFTQDTLADLWQCYANVNRKFRDKIVEVYNEGDMVWVHGFHLLLLPSFLTRVLRTARVGLFLHTPFPSSEIFRTLPFREDLLRGMLNADQIGFHLFEYSRHFLTCCKRILGL 621
            GGR W V WD++++LSL S   D+RV RVG      G   ++  E+E +  AL+PF CVPV+L+  L  KFY  FCKGVLWPVFH+++DVYGD  + F+    L  LW  Y  VNRKFRD+IVEVYN+ D+VWVHGFHLLL+PSFL+R +  A+VGLFLHTPFPSSEIFRTLPFREDLLRGML ADQIGFH++EYSRHFLTCC R+LGL
Sbjct:   37 GGRGWAVRWDHDNVLSLRS---DVRVARVGTPPLPAGCGDLSDAEKEELELALQPFDCVPVWLEADLAEKFYSGFCKGVLWPVFHNMLDVYGDAAVDFWDAQHLDGLWFAYTQVNRKFRDRIVEVYNDRDLVWVHGFHLLLVPSFLSRSV-VAKVGLFLHTPFPSSEIFRTLPFREDLLRGMLVADQIGFHVYEYSRHFLTCCVRLLGL 241
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BLAST of mRNA_S-dermatodea_contig13173.1897.1 vs. uniprot
Match: K8YR86_NANGC (Alpha,alpha-trehalose-phosphate synthase (UDP-forming) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YR86_NANGC)

HSP 1 Score: 275 bits (703), Expect = 5.640e-82
Identity = 128/206 (62.14%), Postives = 159/206 (77.18%), Query Frame = 1 
Query:   16 WMVEWDYESLLSLHSAEIDMRVTRVGCVRYLDGING----EEEEAVAKALEPFSCVPVFLDKALTTKFYRDFCKGVLWPVFHHVVDVYGDLVMRFFTQDTLADLWQCYANVNRKFRDKIVEVYNEGDMVWVHGFHLLLLPSFLTRVLRTARVGLFLHTPFPSSEIFRTLPFREDLLRGMLNADQIGFHLFEYSRHFLTCCKRILGL 621
            W++ WD E+LLSL +    +RVT VG VR    I G    EE+E++A+AL  F CVPVF+D  +  KFY  FCKG LWPVFHH++DVYG    RF+ Q T   +W  Y++VN +FRDK+VEVYNEGD++W+HGFHLL+LPSF+T+ L TA+ GLFLHTPFPSSEIFRTL  REDLLRGMLNAD IGFHL+EY+RHF+TC +RILG+
Sbjct:  340 WIIAWDTENLLSLRTR---LRVTWVGTVRLPAEIGGKLNREEQESLARALRKFDCVPVFIDPEIHDKFYNTFCKGTLWPVFHHILDVYGSRPTRFWDQKTQDSVWHSYSHVNMRFRDKVVEVYNEGDLIWIHGFHLLVLPSFITKSLPTAKTGLFLHTPFPSSEIFRTLSVREDLLRGMLNADHIGFHLYEYARHFVTCVRRILGV 542
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BLAST of mRNA_S-dermatodea_contig13173.1897.1 vs. uniprot
Match: A0A7S2UVC1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVC1_9STRA)

HSP 1 Score: 266 bits (679), Expect = 2.930e-80
Identity = 120/169 (71.01%), Postives = 144/169 (85.21%), Query Frame = 1 
Query:  124 EEEEAVAKALEPFSCVPVFLDKALTTKFYRDFCKGVLWPVFHHVVDVYGDLVMRFFTQDTLADLWQCYANVNRKFRDKIVEVYNEGDMVWVHGFHLLLLPSFLTRVLRTARVGLFLHTPFPSSEIFRTLPFREDLLRGMLNADQIGFHLFEYSRHFLTCCKRILGLNEG 630
            +++  + +AL  F CVPV+LD+AL TKFY++FCKGVLWP+FH+VVD+YGDL   F+  DTL   WQ Y  VNR+FRDKIVEVYNE D++W+HGFHLLL+PSFL+RVL  A+VGLFLHTPFPSSEIFRTLPFREDLLRG+LNADQ+GFHL+E+SRHFLT C RILGL  G
Sbjct:   11 DDKLQLEQALAVFDCVPVWLDEALATKFYQEFCKGVLWPIFHNVVDIYGDLSTHFWDSDTLGTAWQAYMMVNRQFRDKIVEVYNECDLIWIHGFHLLLVPSFLSRVLHVAKVGLFLHTPFPSSEIFRTLPFREDLLRGILNADQVGFHLYEHSRHFLTSCVRILGLPSG 179
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BLAST of mRNA_S-dermatodea_contig13173.1897.1 vs. uniprot
Match: B8BYN3_THAPS (Trehalose-6-phosphate synthase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYN3_THAPS)

HSP 1 Score: 240 bits (613), Expect = 2.820e-71
Identity = 114/207 (55.07%), Postives = 148/207 (71.50%), Query Frame = 1 
Query:   10 GRWMVEWDYESLLSLHSAEIDMRVTRVGCVRYLDGINGEEEEAVAKALEPFSCVPVFLDKALTTKFYRDFCKGVLWPVFHHVVDVYGDLVMRFFTQDTLADLWQCYANVNRKFRDKIVEVYNEGDMVWVHGFHLLLLPSFLTRVLRTARVGLFLHTPFPSSEIFRTLPFREDLLRGMLNADQIGFHLFEYSRHFLTCCKRILGLNEG 630
            G W  +WDYE+LLS+ +    +RVTRVG      G+  +E   V   L PF+CVPV++  +L  + Y  FCKGVLWP+ H+   ++GD           A+LW  +  VNR F D I++ +NEGD++W+HGFHL++LPSFLTR +  A++G+FLHTPFPSSEIFRTL  REDLLRGMLNADQ+GFHLFEY+RHFLTCC+R+LGLN G
Sbjct:   22 GEWSADWDYEALLSMQT---HLRVTRVGT----SGVPVDERHKVEAVLRPFNCVPVWVPTSLFGEMYNGFCKGVLWPILHNG-PIHGD-------GGREAELWAAFTAVNRYFTDVIIQCFNEGDLIWIHGFHLMILPSFLTRRISMAKIGIFLHTPFPSSEIFRTLWCREDLLRGMLNADQVGFHLFEYARHFLTCCRRLLGLNYG 213
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BLAST of mRNA_S-dermatodea_contig13173.1897.1 vs. uniprot
Match: A0A7S0J819_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J819_9EUKA)

HSP 1 Score: 226 bits (575), Expect = 5.980e-71
Identity = 110/211 (52.13%), Postives = 145/211 (68.72%), Query Frame = 1 
Query:    1 DTGGRWMVEWDYESLLSL--HSAEID-MRVTRVGCVRYLDGINGEEEEAVAKALEPFSCVPVFLDKALTTKFYRDFCKGVLWPVFHHVVDVYGDLVMRFFTQDTLADLWQCYANVNRKFRDKIVEVYNEGDMVWVHGFHLLLLPSFLTRVLRTARVGLFLHTPFPSSEIFRTLPFREDLLRGMLNADQIGFHLFEYSRHFLTCCKRILGLN 624
            D GG W V+W+ +S+L+   H+ +    RV  +GC      +  EEE A+ +AL   SCVPVFLD  L   FY  FC+  L+P+FH+V++       R          W+ Y  VNR+F +K++EVY  GD++W+H +HLLLLPS + R LRTARVGLFLHTPFPSSEIFRT+  R++LLRGMLNAD +GFH+FEY+RHFLTCCKR+LGL+
Sbjct:    7 DAGGGWHVDWNPDSVLAAREHAGQRGGKRVVWIGCPGI--AVPAEEEAALTEALWALSCVPVFLDAELHDSFYAGFCRSFLYPIFHNVIEAGSFKASR----------WRAYCTVNRRFAEKVIEVYEPGDVIWIHDYHLLLLPSVVLRKLRTARVGLFLHTPFPSSEIFRTISVRDELLRGMLNADIVGFHVFEYARHFLTCCKRMLGLS 205
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BLAST of mRNA_S-dermatodea_contig13173.1897.1 vs. uniprot
Match: A0A7S2F9H1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F9H1_9STRA)

HSP 1 Score: 231 bits (588), Expect = 7.100e-70
Identity = 107/206 (51.94%), Postives = 148/206 (71.84%), Query Frame = 1 
Query:   34 YESLLSLHSAEIDMRVTRVGCVRYLDGINGEEEEAVAKALEPFSCVPVFLDKALTTKFYRDFCKGVLWPVFHHVVDVYGDLVMRFFTQDT----------LADLWQCYANVNRKFRDKIVEVYNEGDMVWVHGFHLLLLPSFLTRVLRTARVGLFLHTPFPSSEIFRTLPFREDLLRGMLNADQIGFHLFEYSRHFLTCCKRILGL 621
            +E+LLSL +    +RVTR+G VR+  G+  E ++ +   LE F+CVP+++D  L   F+  FCK  LWPVFH+++++YG +      ++             D W  Y +V R F+  I+E+Y++GD++W+HGFHLLLLP+FL+R L  A++GLFLHTPFPSSEIFRTL  R+DLLRGML+ADQIGFHL+EY+RHFLTCC+RILGL
Sbjct:    1 HEALLSLKT---QLRVTRIGTVRFKGGVPLESQDELTSILEQFNCVPIYIDPELHHAFFSTFCKQTLWPVFHNLLEIYGPVPTGQAAREAGNAFREGSRPEQDAWSAYTSVQRIFKKTIIEMYHDGDLIWIHGFHLLLLPTFLSRQLHMAKIGLFLHTPFPSSEIFRTLSKRDDLLRGMLSADQIGFHLYEYARHFLTCCRRILGL 203
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BLAST of mRNA_S-dermatodea_contig13173.1897.1 vs. uniprot
Match: K3W8D4_GLOUD (CBM20 domain-containing protein n=2 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W8D4_GLOUD)

HSP 1 Score: 238 bits (606), Expect = 1.010e-68
Identity = 118/216 (54.63%), Postives = 152/216 (70.37%), Query Frame = 1 
Query:   10 GRWMVEWDYESLLS----LHSAEID--------MRVTRVGCVRYLDGINGEEEEAVAKALEPFSCVPVFLDKALTTKFYRDFCKGVLWPVFHHVVDVYGDLVMRFFTQDTLADLWQCYANVNRKFRDKIVEVYNEGDMVWVHGFHLLLLPSFLTRVLRTARVGLFLHTPFPSSEIFRTLPFREDLLRGMLNADQIGFHLFEYSRHFLTCCKRILGL 621
            G +++EW+ ++L+     +  A  D        MR+T VG V     I  E+EE +A+ LE F CVPVFL+K+L   F+  FC G LWP+FH++VDVYG L  R++  +   + W  Y NVNR F +K++EVYNEGD+VWVHG HLL+ PSFL+R L +  VGLFLHTPFPSSEIFRTL  R DLLRGML+AD IGFHL+E++RHFLT C+RILGL
Sbjct:  325 GEYLIEWEDDNLVCPSGLMKDANSDSHFDRVNSMRLTWVGTVHCSSTIPREDEECLARQLEAFHCVPVFLNKSLADTFHS-FCYGTLWPIFHNIVDVYGRLPTRWWNPNQQKNAWSSYKNVNRIFVNKVIEVYNEGDLVWVHGLHLLVAPSFLSRRLPSVNVGLFLHTPFPSSEIFRTLSVRSDLLRGMLSADHIGFHLYEHARHFLTSCRRILGL 539
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13173.1897.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
V5K3Y9_SACJA5.850e-13288.94Trehalose-6-phosohate synthase n=1 Tax=Saccharina ... [more]
D7FL73_ECTSI1.330e-9770.97Trehalose 6-phosphate synthase, family GT20 / Treh... [more]
A0A835YZM5_9STRA2.000e-8747.71Glycosyltransferase family 20-domain-containing pr... [more]
A0A7S3XSU4_HETAK4.480e-8664.11Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
K8YR86_NANGC5.640e-8262.14Alpha,alpha-trehalose-phosphate synthase (UDP-form... [more]
A0A7S2UVC1_9STRA2.930e-8071.01Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
B8BYN3_THAPS2.820e-7155.07Trehalose-6-phosphate synthase (Fragment) n=1 Tax=... [more]
A0A7S0J819_9EUKA5.980e-7152.13Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
A0A7S2F9H1_9STRA7.100e-7051.94Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
K3W8D4_GLOUD1.010e-6854.63CBM20 domain-containing protein n=2 Tax=Globispora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13173contigS-dermatodea_contig13173:2128..6754 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score236.1
Seed ortholog evalue1.5e-59
Seed eggNOG ortholog35128.Thaps12729
KEGG rclassRC00005,RC00017,RC00049,RC02748
KEGG koko:K16055
KEGG ReactionR02737,R02778
KEGG Pathwayko00500,ko01100,map00500,map01100
EggNOG free text desc.Glycosyltransferase family 20
EggNOG OGs2XB3T@2836,COG1877@1,KOG1050@2759
EC2.4.1.15,3.1.3.12
COG Functional cat.G
CAZyGT20
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003
Hectar predicted targeting categoryother localisation
Exons4
Model size657
Cds size639
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13173.1897.1prot_S-dermatodea_contig13173.1897.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig13173 2128..6736 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924276.0967865-CDS-S-dermatodea_contig13173:2127..22291622924276.0967865-CDS-S-dermatodea_contig13173:2127..2229Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13173 2128..2229 -
1694079143.9116158-CDS-S-dermatodea_contig13173:2127..22291694079143.9116158-CDS-S-dermatodea_contig13173:2127..2229Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13173 2128..2229 -
1622924276.1061816-CDS-S-dermatodea_contig13173:3261..34501622924276.1061816-CDS-S-dermatodea_contig13173:3261..3450Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13173 3262..3450 -
1694079143.929672-CDS-S-dermatodea_contig13173:3261..34501694079143.929672-CDS-S-dermatodea_contig13173:3261..3450Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13173 3262..3450 -
1622924276.1234763-CDS-S-dermatodea_contig13173:5372..55131622924276.1234763-CDS-S-dermatodea_contig13173:5372..5513Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13173 5373..5513 -
1694079143.9400709-CDS-S-dermatodea_contig13173:5372..55131694079143.9400709-CDS-S-dermatodea_contig13173:5372..5513Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13173 5373..5513 -
1622924276.1377976-CDS-S-dermatodea_contig13173:6529..67361622924276.1377976-CDS-S-dermatodea_contig13173:6529..6736Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13173 6530..6736 -
1694079143.949452-CDS-S-dermatodea_contig13173:6529..67361694079143.949452-CDS-S-dermatodea_contig13173:6529..6736Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13173 6530..6736 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924276.1507275-UTR-S-dermatodea_contig13173:6736..67541622924276.1507275-UTR-S-dermatodea_contig13173:6736..6754Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig13173 6737..6754 -
1694079143.9595263-UTR-S-dermatodea_contig13173:6736..67541694079143.9595263-UTR-S-dermatodea_contig13173:6736..6754Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig13173 6737..6754 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig13173.1897.1

>prot_S-dermatodea_contig13173.1897.1 ID=prot_S-dermatodea_contig13173.1897.1|Name=mRNA_S-dermatodea_contig13173.1897.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=213bp
MVEWDYESLLSLHSAEIDMRVTRVGCVRYLDGINGEEEEAVAKALEPFSC
VPVFLDKALTTKFYRDFCKGVLWPVFHHVVDVYGDLVMRFFTQDTLADLW
QCYANVNRKFRDKIVEVYNEGDMVWVHGFHLLLLPSFLTRVLRTARVGLF
LHTPFPSSEIFRTLPFREDLLRGMLNADQIGFHLFEYSRHFLTCCKRILG
LNEGDSNNRGDI*
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mRNA from alignment at S-dermatodea_contig13173:2128..6754-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig13173.1897.1 ID=mRNA_S-dermatodea_contig13173.1897.1|Name=mRNA_S-dermatodea_contig13173.1897.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4627bp|location=Sequence derived from alignment at S-dermatodea_contig13173:2128..6754- (Saccorhiza dermatodea SderLu1190fm monoicous)
GACACGGGGGGGAGGTGGATGGTGGAGTGGGACTACGAGAGCTTGCTCAG
TCTCCACTCTGCGGAGATTGACATGCGCGTGACGCGAGTGGGGTGTGTAC
GGTACCTGGACGGGATTAATGGTGAGGAGGAGGAGGCCGTGGCGAAGGCG
CTGGAGCCATTTTCGTGCGTGCCGGTGTTTTTGGACAAGGCGCTCACGAC
GAAGTTCTACCGCGACTTTTGCAAGGTGGGGTGGGCGGTATCTGTCGTTG
TTGTTGTTGTTGTTAATAACAATGTTATTATTATCGAGGAGGACCATAGT
AAACTGGTCCAAATTGTTCACTAACCTTAACTCAGCAAAACAAAATACGC
CGCGACTTTTGCAAGGTGGGGTGGGCGGTATCTGTCGTTGTTGTTGTTGT
TGTTAATAACAATGTTATTATTATCGAGGAGGACCATAGTAAACTGGTCC
AAATTGTTCACTAACCTTAACTCAGCAAAACAAAATACGCCGCGACTTTT
GCAAGGTGGGGTGGGCGGTATCTGTCGTTGTTATTGTTGTTGTTGTTATG
GAGGACCTATGGAGTAAACAGTAAACAGGTCCAATTTCATCACTTCACAA
GTCCCCCGTAACAGTGAATCACACGGGGTTGCACGCGTACACTAATAATG
GTATAATACACACCCACCTTTTGGATACTGTAGTTCCATGCCCTGTACGG
AGGCTTTGTGCCTCTGCCTGGATGTTGGAGTCACACCTAATGATTGAGCT
GTATGTTATGTTTCGTTTGATATGCTTTTGCTCCGGTTGTCGCAAGACCG
CCGCACGTTCACCTCAGCAGTTACAGCAGTACCATTTAGTTCTATTTTTG
CAGTTTTTTGTGCCTATGAGTTAACTATCATGCCAGAGACGGTGCTGTGT
ATCGTGTTAACATAACTACTGTAATAGTGTAGAGTTCTGATTAGTTATCT
TGTCCTTGCCTCTTTGCTATGTAATAGCATCTGGCCACGGGTCGAATAGG
TCGGATTAAGCCGATCGGCTACATGTACGTGTGCAAATCAATCAATCAAT
CAATAAATCAAATCAATCAAATCAATCAATCATTCAATCAATCAATCATT
CAATCAATCATTCATTCAATCAATCAATCAATCAATCAATCAATCAATCA
ATCGATCAAATGTATTAAAGAACGTGCAAAGTGCTGTCAATTGCTCATAT
ATATATATATTTTTTTTCTTCTTTTTCTCACGACGGCGCAGGGCGTGTTG
TGGCCGGTGTTTCACCACGTCGTGGACGTCTACGGAGATCTTGTGATGCG
GTTCTTCACCCAGGACACGCTGGCGGACCTGTGGCAGTGCTACGCGAACG
TCAACCGGAAATTTCGAGACAAGATCGTCGAGGTGGGTTTTGATGTGACT
ATTTTATTAATAGTCGGTATTAATAGCCCCGGCTACGCCCGTGAGGTGTG
TGCGTTGGGAGGACGTTATCATGCCATCTTTGCTGAACAAACCTTGCCAG
CGCTCACTAAAACAATGAAATTTGTGCCAGCCGTGACCATCGTTGTCCAA
TGAACCTTGCCAGCGCTTTCAAACACGACGTACATAGGTAACAGCATCGT
ATATCTCACAAAACAGATTCGCCCGTTCATGACGGGATGTGAGTTGAGAG
GGCACGGTGATGGTCGTACCCACGGCATCATGCGTCCACCCACGTGGGAG
GAAAGGAAGCCGAGCGTGCGGGGGGGCGGGGACAAACAGAGTATCGGTAT
TAGAGACTGCACTGTTGTCCATATATCGGCATCAGCAAAATGCATCGAGG
GGCTCCACTCTAAATTCTAAACAGACCGAAGTGCAAAGCGCTGTTAAACC
CCTTTTGGTATAATACTAAAGTAGCCCCCTGTTTGGAGAGGCGGTTACAG
TAGCAGGTAATGAGGCGTGCTTGAAGCGGAGGAGCCCTGGGGAACGGAAC
CCGCAGGATATTATGATATTATATGAGAAAGAAAGGAGCCCAAGGGAAGC
AACCAACGAACCGGGCCTGTCGTAGCTGTCGACTGGCATCGAGAGAGTTT
TGTTTTGTCGTTTCGGAGAGCCCTACTATTAACAAAATACTTATAGAGCT
CTAATACAGTAGTAACAAAAGTGTTAATTAATGAAGATATGTTGGCTGTT
CCGGGCAGTAGACGTTGGCACTGCGTAGTCCGTGCGCCCCGTGGTACGGT
ACGGTGTATAGTAGAAGTAGAGTTCTGATTATTAATAGGTCTTTTTCTCC
TTGACTCTTTGCGTGTCTGACCACAAGTCGGATAGGTCGGATTAAGCCGA
TCGGCTATACGTGTGCAAATCAAAAATATATATATATATCGTGGTTGAAC
TGGTACCCCAAAGTCCAGTAGGGCGGAGGACCCGGGTTCGAATCCGGGCA
GAGTCGACGTTGTTATTTTTTCTCTTTTACCTCCGCCGCGGAAAAAGCGC
GACGGCGTGAGTAAGGAAATTCCGATCTATCATCGGCGAGCAGCGGGAGG
GAGTGTGCCGAACCCAACGCATTCGCGATAAAAAAAAATGAAATAAATAA
ACAGGGTAAGAACCGGGGATAAGATAATAAGAGAGATGGAATGATCCCTT
GTGAGCATAGACGGACCTCGAAAAAAAAAGCCGGTGTATCATACGTGTGC
AAAAATAAATAAAGAAGTAGATAATACCTAATTATACTAAAAAATGTATT
AACAATAATGTACTCATAATAATAGCGCTTTTGGTCGGTCTGTGTTGTCC
GTTTAGGACGGTCCACGTATCCGAGGGTCGATTATAATTTATAATAACAG
CTTTTCTATTTCTATATACGAGCATGTACTGTATGTAGAAGTAGATATCT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTTTCTCTC
CTTGACTGCTTGTACCGCTTTGACATGTTTTCAGTACAAGTAGCGATTTA
TAAACCATTTTGTGTCACCGGAATCCTATAGGAAAAATTGACGCCAAACA
ACTGGATGTTTGTGTTGAGCGCCAAACGATTTGATTTTAGAGTTGAGTGC
GAGCGACCACGCACACCTCACGGGCGTAGCCGTGGCTATCTACAGTTTTA
TCGTAACATACTTCTACTATTAGAATGTATTAATATTAATAGCATCTGTC
GGGTCGGCATCAGAGTTACAAGCCAGGGTTTCAAGCCATTATCCTATCGA
AGATAACAGCAGACAGAGACAGTGCCCAAACCAATACAACAAATCAATCA
ATCACTCAATCACTCAATCATCGCACAACTGCCCATTTTCTATTGGGTTT
CCAGGTGTACAACGAGGGGGACATGGTTTGGGTCCACGGGTTCCATCTCC
TTCTGCTCCCTTCTTTTCTGACGAGGGTGCTGAGGACAGCGCGGGTGGGG
CTGTTTCTCCACACGCCATTCCCCTCTTCGGAGATCTTCAGAACGCTGCC
GTTCCGAGAGGACCTGCTCAGGGGCATGCTTAACGCCGACCAGGTACAGT
ATACTTAGTATGTTTTTTTAATAAAGAAACAGAGCACAGAAAGTGCACAA
CAATCTATACTATTACTAGTACAATAACTCATCGGGACAGGACCCCGGTG
GACTTTGTTGTACGCAAAACTGAGATAATTTATCATGCTGACATGCCAAG
CTGGCAGGTGCGCTACGTAACGCAAGCTACCTGCTTGGAGAGGCCCACGA
TGGTTTTTTATCCCTTCCTCGTCTTGTGTGCGCCCGTGGGCACCCACCAC
AGCAGAAACGACAGTAAAATATGAAGAGCCCATGCCGTGGATATTGCAGT
TGTGGGGAATTTCATCTACTATACATCATCTATCTATCTGCCCCTGGGTG
CCGACTGAACAGCACAGCAGCAGCAGCAGTGCTACGAGTACAGAGTACGC
ACCTCTGGCACTGCTGTCTGATGACTTATTTCTGCTACGTGCACTGCTGT
GATACTACTCGGGGAGGCCCTCGGTTGCTCTTCTCCCCTTCTCTCTATCT
GTGCGCCCATTGGCACCCGCAGCATAGGTGCATGCATGTGGTATGTACGC
ACGTATTATGTACAGTATATACTTCGAAGTATGTGTGTAACTGCTGCATT
ACGTATGTATGATACTTCAGGTGATCATTTGTCTATACATGTAAGCGTCG
AGCTCTATATATGTACTTCGTATGTTCAGCGGTAGCTCTAAAAGTATGTA
CTGTGTATGCATGTACAGCAGACAGCAGTATATATACATGTACTGCATGT
ACTACTGCTGTAGGATTTATATGTTAGTATCATCGTATTGTATACAGCTG
ATAGATAACATTGTATTGTACCGCCCTTGCACCTATTCCTTTCAATATTT
CACGAGCAAGATACATGAATAACAATATACCATACAATACAAGTACATGA
ATAGGCTCTATTATAAAAATTGTATACATAACATGACTTACGCCCTTTCT
AACGCCGGCCCGCTACTTGTTTATGTTTTGTGCGCGTGCTGTGTTGTGTT
GTGTTGTGTTGTGTTGCGAGGGCAGATCGGGTTCCACCTGTTCGAGTACT
CAAGACATTTCCTCACGTGCTGCAAGCGAATACTTGGGCTCAACGAGGGG
GATAGCAACAACCGAGGTGATATATGA
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Coding sequence (CDS) from alignment at S-dermatodea_contig13173:2128..6754-

>mRNA_S-dermatodea_contig13173.1897.1 ID=mRNA_S-dermatodea_contig13173.1897.1|Name=mRNA_S-dermatodea_contig13173.1897.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1278bp|location=Sequence derived from alignment at S-dermatodea_contig13173:2128..6754- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGTGGAGTGGGACTACGAGAGCTTGCTCAGTCTCCACTCTGCGGAGAT
TGACATGCGCGTGACGCGAGTGGGGTGTGTACGGTACCTGGACGGGATTA
ATGGTGAGGAGGAGGAGGCCGTGGCGAAGGCGCTGGAGCCATTTTCGTGC
GTGCCGGTGTTTTTGGACAAGGCGCTCACGACGAAGTTCTACCGCGACTT
TTGCAAGATGGTGGAGTGGGACTACGAGAGCTTGCTCAGTCTCCACTCTG
CGGAGATTGACATGCGCGTGACGCGAGTGGGGTGTGTACGGTACCTGGAC
GGGATTAATGGTGAGGAGGAGGAGGCCGTGGCGAAGGCGCTGGAGCCATT
TTCGTGCGTGCCGGTGTTTTTGGACAAGGCGCTCACGACGAAGTTCTACC
GCGACTTTTGCAAGGGCGTGTTGTGGCCGGTGTTTCACCACGTCGTGGAC
GTCTACGGAGATCTTGTGATGCGGTTCTTCACCCAGGACACGCTGGCGGA
CCTGTGGCAGTGCTACGCGAACGTCAACCGGAAATTTCGAGACAAGATCG
TCGAGGGCGTGTTGTGGCCGGTGTTTCACCACGTCGTGGACGTCTACGGA
GATCTTGTGATGCGGTTCTTCACCCAGGACACGCTGGCGGACCTGTGGCA
GTGCTACGCGAACGTCAACCGGAAATTTCGAGACAAGATCGTCGAGGTGT
ACAACGAGGGGGACATGGTTTGGGTCCACGGGTTCCATCTCCTTCTGCTC
CCTTCTTTTCTGACGAGGGTGCTGAGGACAGCGCGGGTGGGGCTGTTTCT
CCACACGCCATTCCCCTCTTCGGAGATCTTCAGAACGCTGCCGTTCCGAG
AGGACCTGCTCAGGGGCATGCTTAACGCCGACCAGGTGTACAACGAGGGG
GACATGGTTTGGGTCCACGGGTTCCATCTCCTTCTGCTCCCTTCTTTTCT
GACGAGGGTGCTGAGGACAGCGCGGGTGGGGCTGTTTCTCCACACGCCAT
TCCCCTCTTCGGAGATCTTCAGAACGCTGCCGTTCCGAGAGGACCTGCTC
AGGGGCATGCTTAACGCCGACCAGATCGGGTTCCACCTGTTCGAGTACTC
AAGACATTTCCTCACGTGCTGCAAGCGAATACTTGGGCTCAACGAGGGGG
ATAGCAACAACCGAGGTGATATATGAATCGGGTTCCACCTGTTCGAGTAC
TCAAGACATTTCCTCACGTGCTGCAAGCGAATACTTGGGCTCAACGAGGG
GGATAGCAACAACCGAGGTGATATATGA
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