mRNA_S-dermatodea_contig13163.1892.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_S-dermatodea_contig13163.1892.1
Unique Name	mRNA_S-dermatodea_contig13163.1892.1
Type	mRNA
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)

Homology

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BLAST of mRNA_S-dermatodea_contig13163.1892.1 vs. uniprot
Match: D8LE21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE21_ECTSI)

HSP 1 Score: 260 bits (665), Expect = 2.620e-80
Identity = 125/167 (74.85%), Postives = 139/167 (83.23%), Query Frame = 1

Query:    1 HFSALTPRGVTGHPEHHVKGMSADDVAVVQIKTRSKSGAFLPCEEEVGRVVDTAMSSSPSSVVVVHCVVGSKTGICSPPVDALVNLQERYGERLLVVVDACQLRTVTGNIRKYAALGFLTLVTGSKFYCAPPFCGAVLFPPSALAELEAGHEHLPAGFEDYFTRHEV 501
            HFS LTPRG  G PE+HV+GM A DV VVQ+KTRSKSGAFLPCE+ V   V  A+SS P+SVVVVH V GSKTGICSP  + L  +++RYGERLLVVVDACQLR    N+RKY +LGFLTLVTGSKFYC PPFCGAVLFPP ALAEL+AGHEHLPAGF+DYFTRHEV
Sbjct:  296 HFSKLTPRGTPGRPENHVEGMPAGDVVVVQMKTRSKSGAFLPCEDLVRSAVHKALSSCPTSVVVVHFVAGSKTGICSPSENVLAEMRQRYGERLLVVVDACQLRLEDQNVRKYVSLGFLTLVTGSKFYCGPPFCGAVLFPPEALAELQAGHEHLPAGFDDYFTRHEV 462

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BLAST of mRNA_S-dermatodea_contig13163.1892.1 vs. uniprot
Match: A0A6H5JKQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ2_9PHAE)

HSP 1 Score: 254 bits (650), Expect = 3.110e-78
Identity = 122/167 (73.05%), Postives = 136/167 (81.44%), Query Frame = 1

Query:    1 HFSALTPRGVTGHPEHHVKGMSADDVAVVQIKTRSKSGAFLPCEEEVGRVVDTAMSSSPSSVVVVHCVVGSKTGICSPPVDALVNLQERYGERLLVVVDACQLRTVTGNIRKYAALGFLTLVTGSKFYCAPPFCGAVLFPPSALAELEAGHEHLPAGFEDYFTRHEV 501
            HFS LTPRG  G PE+HV+GM A DV VVQIKTRSKSGAFLPCE+ V   V  A+SS P+SVVVVH V GSKTGICSP  + L  +++RYGE LLVVVDACQLR    N+RKY +LGFLTL+TGSKFYC PPFCGAVLFP  ALAEL+ GHEHLPAGF+DYFTRHEV
Sbjct:  230 HFSKLTPRGTPGRPENHVEGMPAGDVVVVQIKTRSKSGAFLPCEDIVRSAVHKALSSCPTSVVVVHFVAGSKTGICSPSENVLAEMRQRYGEHLLVVVDACQLRLEDQNVRKYVSLGFLTLITGSKFYCGPPFCGAVLFPTEALAELQGGHEHLPAGFDDYFTRHEV 396

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BLAST of mRNA_S-dermatodea_contig13163.1892.1 vs. uniprot
Match: A0A0G4G0K1_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G0K1_9ALVE)

HSP 1 Score: 134 bits (338), Expect = 2.140e-33
Identity = 70/180 (38.89%), Postives = 103/180 (57.22%), Query Frame = 1

Query:    1 HFSALTPRGVTGHPEHHVKGMSADDVAVVQIKT---RSKSGAFLPCEEEVGRVVDTAMSSSPSSVVVVHCVVGSKTGICSPPVDALVNLQERYGERLLVVVDACQLRTVTGNIRKYAALGFLTLVTGSKFYCAPPFCGAVLFPPSALAELEA--------GHEHLPAGFEDYFTRHEVCV 507
            HFSA  P G T      ++G+   D+  V+++    R+K G+F P E+++   V   +    + VV++H V+GSKTG+C P +D +  LQ+++GE+ L VVDACQ+R   G + ++  LG   L+TGSKF+C PPF  A +FPPS    L+         G   +P G  DYF R EV V
Sbjct:  318 HFSAFAPAGGTQKVGEPIRGVGESDLCSVRVECFAPRAKIGSFEPNEDDIETTVKETLEGRKAKVVLLHVVLGSKTGLCYPSMDLVERLQKKHGEQFLCVVDACQMRLPKGGLTEFLQLGCPCLITGSKFFCGPPFSAAAVFPPSLKEALQYSGGVGRKDGEPVMPLGMGDYFGRFEVPV 497

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BLAST of mRNA_S-dermatodea_contig13163.1892.1 vs. uniprot
Match: A0A1W0A0H2_9STRA (Pyridoxal-dependent decarboxylase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A0H2_9STRA)

HSP 1 Score: 132 bits (331), Expect = 5.750e-33
Identity = 71/172 (41.28%), Postives = 104/172 (60.47%), Query Frame = 1

Query:    1 HFSALTPRGVTGHPEHHVKGMSADDVAVVQIKTRSKSGAFLPCEEEVGRVVDTAMSSSPSS---VVVVHCVVGSKTGICSPPVDALVNLQERYGERLLVVVDACQLRTVTGNIRKYAALGFLTLVTGSKFYCAPPFCGAVLFPPSALAELEAGHEH--LPAGFEDYFTRHEV 501
            HFS L+P G    P  H++G  +     +QI  R   GA    +E V + V  A+++SP++   VV++H V+GSKTG+  P +  +  L   Y ERL+VVVDACQ+R    ++ +Y + GFL LVTGSKF+   PFCG VL P   + ELE+ +    LP G+ DYF+++E+
Sbjct:  317 HFSKLSPSGDIVEPGKHLRGFPSTKANCIQIPARQDDGAIQNADEIVRQSVVDALTTSPTAEQNVVLLHVVMGSKTGLSCPSLQLVDELTSTYPERLIVVVDACQMRLDNLSLAEYISRGFLILVTGSKFFAGVPFCGGVLAPTRHVDELESSNATICLPVGYGDYFSKYEI 488

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BLAST of mRNA_S-dermatodea_contig13163.1892.1 vs. uniprot
Match: A0A7W1ZS58_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A7W1ZS58_9BACT)

HSP 1 Score: 130 bits (328), Expect = 3.920e-32
Identity = 69/168 (41.07%), Postives = 100/168 (59.52%), Query Frame = 1

Query:    1 HFSALTPRGVTGHPEHHVKGMSADDVAVVQIKTRSKSGAFLPCEEEVGRVVDTAMSSSP-SSVVVVHCVVGSKTGICSPPVDALVNLQERYGERLLVVVDACQLRTVTGNIRKYAALGFLTLVTGSKFYCAPPFCGAVLFPPSALAELEAGHEHLPAGFEDYFTRHEV 501
            HF   TP G        + G+ AD V VV I  R + G+ L  EE   R+    + ++  +  V++H V  +KTG+ +P  + ++ L++ +G+RLLVVVDACQ R    N+ +Y A GF  L+TGSKF+  PPFCGA+L P  +  ++   H  LP+GF DYFTR+EV
Sbjct:  347 HFGTRTPLGANVRQGETLTGLEADSVDVVCIPIRERGGSRLTHEELKQRISKAVIEAARVADKVILHIVDNTKTGVVAPDAEFVLALKKDFGKRLLVVVDACQFRLEKANLHRYLAHGFCVLITGSKFFTGPPFCGALLVP--SQFDITGDHAPLPSGFSDYFTRNEV 512

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BLAST of mRNA_S-dermatodea_contig13163.1892.1 vs. uniprot
Match: A0A6G0WX70_9STRA (Orn_Arg_deC_N domain-containing protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WX70_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.580e-31
Identity = 67/168 (39.88%), Postives = 97/168 (57.74%), Query Frame = 1

Query:    1 HFSALTPRGVTGHPEHHVKGMSADDVAVVQIKTRSKSGAFLPCEEEVGRVVDTAMSSSPSSVVVVHCVVGSKTGICSPPVDALVNLQERYGERLLVVVDACQLRTVTGNIRKYAALGFLTLVTGSKFYCAPPFCGAVLFPPSALAELEAGHEHL--PAGFEDYFTRHE 498
            HFS +TP G +      + G  +  V  VQI  R  SG  L  +      V  A+SS+P++V ++H V+GSKTG+  P + A+  L + +G RL+VVVDACQ+R     +  + AL ++ LVTGSKF+   PFCG+VL P    +E+ A    +  P GF  YF++HE
Sbjct:  332 HFSKITPSGESVDIGKALAGFPSTRVTCVQIPARQTSGHILDADAAATTAVRDALSSNPNNVALLHVVLGSKTGLSCPSLGAVAALTDEFGSRLVVVVDACQMRLDRAALADFLALDYIVLVTGSKFFAGVPFCGSVLVPAQLASEMNAADARICFPPGFGQYFSKHE 499

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BLAST of mRNA_S-dermatodea_contig13163.1892.1 vs. uniprot
Match: W4H0B4_9STRA (Orn_Arg_deC_N domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H0B4_9STRA)

HSP 1 Score: 124 bits (312), Expect = 6.510e-30
Identity = 62/166 (37.35%), Postives = 99/166 (59.64%), Query Frame = 1

Query:    1 HFSALTPRGVTGHPEHHVKGMSADDVAVVQIKTRSKSGAFLPCEEEVGRVVDTAMSSSPSSVVVVHCVVGSKTGICSPPVDALVNLQERYGERLLVVVDACQLRTVTGNIRKYAALGFLTLVTGSKFYCAPPFCGAVLFPPSALAELEAGHEHL--PAGFEDYFTR 492
            HFS LTP G        +    +  V  +Q+  R++ G+ +  +    + V  A++++P++V ++H V+GSKTG+  P ++A+  L   YG RL+VV+DACQ+R   G +  +   G++ LVTGSKFY   PFCG+VL P  ++ EL   +  +  PAG+ DYFT+
Sbjct:  331 HFSKLTPSGEGVEVGTSLCAFPSCRVKCIQVPARNEDGSVVDTDTTASQAVTNALTANPNNVALLHVVMGSKTGLSCPSLNAVQALTSTYGTRLVVVIDACQMRLNRGALVDFIQRGYIVLVTGSKFYAGVPFCGSVLIPAQSVYELNVANPSVCFPAGYGDYFTK 496

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BLAST of mRNA_S-dermatodea_contig13163.1892.1 vs. uniprot
Match: A0A1V9Z8U6_9STRA (Pyridoxal-dependent decarboxylase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z8U6_9STRA)

HSP 1 Score: 124 bits (311), Expect = 8.840e-30
Identity = 70/172 (40.70%), Postives = 100/172 (58.14%), Query Frame = 1

Query:    1 HFSALTPRGVTGHPEHHVKGMSADDVAVVQIKTRSKSGAFLPCEEEVGRVVDTAMSSSPSS---VVVVHCVVGSKTGICSPPVDALVNLQERYGERLLVVVDACQLRTVTGNIRKYAALGFLTLVTGSKFYCAPPFCGAVLFPPSALAELEAGHEH---LPAGFEDYFTRHE 498
            HFS L P G T  P   ++   +  V  VQI  R   GA    +  V   V  A+S+SP +   VV++H V+GSKTG+  P ++ +  L  +Y  RL+VV+DACQ+R    ++ +Y A G+L LVTGSKF+   PFCG VL P   + ELE+  +     PAG+ DYF+++E
Sbjct:  318 HFSKLAPSGDTVEPGKPLRAFPSAKVQCVQIAARQDDGAVQNADATVRASVVEALSTSPQAAHNVVLLHVVMGSKTGLSCPSLELVDELSAQYTNRLVVVIDACQMRLDKLSLVEYVARGYLILVTGSKFFAGVPFCGGVLIPSLYIDELESKPDLGSVFPAGYSDYFSKYE 489

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BLAST of mRNA_S-dermatodea_contig13163.1892.1 vs. uniprot
Match: A0A067BV40_SAPPC (Orn_Arg_deC_N domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BV40_SAPPC)

HSP 1 Score: 122 bits (307), Expect = 3.050e-29
Identity = 68/172 (39.53%), Postives = 97/172 (56.40%), Query Frame = 1

Query:    1 HFSALTPRGVTGHPEHHVKGMSADDVAVVQIKTRSKSGAFLPCEEEVGRVVDTAMSSSPSS---VVVVHCVVGSKTGICSPPVDALVNLQERYGERLLVVVDACQLRTVTGNIRKYAALGFLTLVTGSKFYCAPPFCGAVLFPPSALAELEAGHEH---LPAGFEDYFTRHE 498
            HFS L+P G    P   ++G     V  VQI  R   G     +  V   V  A+S+SP++   VV++H V+GSKTG+C P +  +  L   Y  RL+VV+DACQ+R    ++ +Y A G+L L+TGSKF+   PFCG VL P   + ELE   +     P G+ DYF+++E
Sbjct:  322 HFSKLSPSGDAVEPGKLLRGFPTAKVHCVQIPARQDDGHVENADATVRASVIEALSTSPTAAHNVVLLHVVMGSKTGLCCPSLSLVDELSAMYSTRLIVVIDACQMRLDKLSLVEYMARGYLVLITGSKFFAGVPFCGGVLIPSVYIDELEGSDDLGSIFPIGYTDYFSKYE 493

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BLAST of mRNA_S-dermatodea_contig13163.1892.1 vs. uniprot
Match: A0A421H3F4_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421H3F4_9STRA)

HSP 1 Score: 121 bits (304), Expect = 7.770e-29
Identity = 69/173 (39.88%), Postives = 98/173 (56.65%), Query Frame = 1

Query:    1 HFSALTPRGVTGHPEHHVKGMSADDVAVVQIKTRSKSGAFLPCEEEVGRVVDTAMSSSPSSVVVVHCVVGSKTGICSPPVDALVNLQERYGERLLVVVDACQLRTVTGNIRKYAALGFLTLVTGSKFYCAPPFCGAVLFPPSALAELEAG----HEH--LPAGFEDYFTRHEV 501
            HFS LTP G  G P   ++   +  V VV +  R   GA    E+ +  +V   +    S VV++H VVG+KTG   P +  +  L  +Y  RL+VV+DACQ+R      R++AA G++ L+TGSKF+   PFCGAVL P   + E+EA     H    LP G EDYF+R+++
Sbjct:  393 HFSRLTPSGEAGTPGEPLRKFPSGLVDVVTLPARDDQGAVNRIEDRIKELVHEKLDRG-SGVVLLHVVVGTKTGYACPSMSVVDALAGQYPNRLMVVMDACQMRVDRLLYREWAAKGYVVLITGSKFFGGSPFCGAVLMPMRCVFEMEAAAVECHSEIALPLGLEDYFSRYDI 564

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig13163.1892.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig13163.1892.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LE21_ECTSI	2.620e-80	74.85	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JKQ2_9PHAE	3.110e-78	73.05	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A0G4G0K1_9ALVE	2.140e-33	38.89	Uncharacterized protein n=1 Tax=Chromera velia CCM...	[more]
A0A1W0A0H2_9STRA	5.750e-33	41.28	Pyridoxal-dependent decarboxylase (Fragment) n=1 T...	[more]
A0A7W1ZS58_9BACT	3.920e-32	41.07	Uncharacterized protein n=1 Tax=Verrucomicrobia ba...	[more]
A0A6G0WX70_9STRA	1.580e-31	39.88	Orn_Arg_deC_N domain-containing protein n=2 Tax=Ap...	[more]
W4H0B4_9STRA	6.510e-30	37.35	Orn_Arg_deC_N domain-containing protein n=6 Tax=Ap...	[more]
A0A1V9Z8U6_9STRA	8.840e-30	40.70	Pyridoxal-dependent decarboxylase n=1 Tax=Achlya h...	[more]
A0A067BV40_SAPPC	3.050e-29	39.53	Orn_Arg_deC_N domain-containing protein n=2 Tax=Sa...	[more]
A0A421H3F4_9STRA	7.770e-29	39.88	Uncharacterized protein n=4 Tax=Phytophthora kerno...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig13163	contig	S-dermatodea_contig13163:935..6505 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	260.8
Seed ortholog evalue	4.5e-67
Seed eggNOG ortholog	2880.D8LE21
EggNOG OGs	2CXM8@1,2RYCV@2759
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Hectar predicted targeting category	other localisation
Exons	4
Model size	512
Cds size	510
Stop	1
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig13163.1892.1	prot_S-dermatodea_contig13163.1892.1	Saccorhiza dermatodea SderLu1190fm monoicous	polypeptide	S-dermatodea_contig13163 935..6505 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622924275.81622-CDS-S-dermatodea_contig13163:934..1159	1622924275.81622-CDS-S-dermatodea_contig13163:934..1159	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig13163 935..1159 -
1694079143.7555304-CDS-S-dermatodea_contig13163:934..1159	1694079143.7555304-CDS-S-dermatodea_contig13163:934..1159	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig13163 935..1159 -
1622924275.8249347-CDS-S-dermatodea_contig13163:3363..3502	1622924275.8249347-CDS-S-dermatodea_contig13163:3363..3502	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig13163 3364..3502 -
1694079143.770695-CDS-S-dermatodea_contig13163:3363..3502	1694079143.770695-CDS-S-dermatodea_contig13163:3363..3502	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig13163 3364..3502 -
1622924275.834915-CDS-S-dermatodea_contig13163:4498..4593	1622924275.834915-CDS-S-dermatodea_contig13163:4498..4593	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig13163 4499..4593 -
1694079143.7856948-CDS-S-dermatodea_contig13163:4498..4593	1694079143.7856948-CDS-S-dermatodea_contig13163:4498..4593	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig13163 4499..4593 -
1622924275.8437495-CDS-S-dermatodea_contig13163:6454..6505	1622924275.8437495-CDS-S-dermatodea_contig13163:6454..6505	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig13163 6455..6505 -
1694079143.8026452-CDS-S-dermatodea_contig13163:6454..6505	1694079143.8026452-CDS-S-dermatodea_contig13163:6454..6505	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig13163 6455..6505 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at S-dermatodea_contig13163:935..6505-
coding sequence from alignment at S-dermatodea_contig13163:935..6505-

protein sequence of mRNA_S-dermatodea_contig13163.1892.1

>prot_S-dermatodea_contig13163.1892.1 ID=prot_S-dermatodea_contig13163.1892.1|Name=mRNA_S-dermatodea_contig13163.1892.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=170bp
HFSALTPRGVTGHPEHHVKGMSADDVAVVQIKTRSKSGAFLPCEEEVGRV
VDTAMSSSPSSVVVVHCVVGSKTGICSPPVDALVNLQERYGERLLVVVDA
CQLRTVTGNIRKYAALGFLTLVTGSKFYCAPPFCGAVLFPPSALAELEAG
HEHLPAGFEDYFTRHEVCV*

mRNA from alignment at S-dermatodea_contig13163:935..6505-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_S-dermatodea_contig13163.1892.1 ID=mRNA_S-dermatodea_contig13163.1892.1|Name=mRNA_S-dermatodea_contig13163.1892.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5571bp|location=Sequence derived from alignment at S-dermatodea_contig13163:935..6505- (Saccorhiza dermatodea SderLu1190fm monoicous)
CACTTCAGCGCGCTAACCCCTCGAGGGGTTACCGGTCACCCCGAGCATCA
TGTGAGACTGACCCGACTCCAAGGGTGTCCCTACGTACATACGCTCCGTT
CTTGGGATCCTGTGGTTTTTGAGGTGACGCCTTGGTGCGGCAGCATTTTG
ATAAGTTTTGTCGGTATGTAGACGGGTTATAAAGAACAGATTGGTGGTGG
GTGGTTGCGTTCGAAGTCGTCGAACACACTCAAGAGCTATGCATACACAC
TGATTGATTGCTTGATGGATGGATGGGTGGACTGATTGATTGGTTGTAAC
GCGTCTGTTTCCGAGAGCTATATTATGTCCAATGGCTTCTTTGTCTGTAC
TTATATAGGTAGTTCCGTAGTTTTTTTTTCGATCTCTCGATTTTTTCTCA
TCTGACCACGAGCGGGAACGGCAACCATTGGTGGGCCGATCGGTTGCAAG
TGTGATACTCAATAAAGTCAATAAATCTATCAATAAGTGAAGTCAATTAT
TGTTGTATCGTTAAGTCAACGTCTCGGCACGGGGGGGGGGGCGTGGGGTT
CAATACCCGCCAGATTTTATTTATTTTTTATCTTCTCTTCTCTGCGGCGG
AAATATTTCGTGACCGCGCGAAGCATCAGCAAGGTCCAATCCGAGCGATC
AGGGACCTGGATGCGGGAGTGACGAACAAGATTCGAATGGACTTGATTGA
TTCATATTTATGAATTCATGCCACTTTGAACGTTTTTTTAGTTGGCCCTT
GAGGCCAAATCAATAGGGCTTGAAGAGTATTATAAAGTTTTTAATATTGT
TAGGATCTTTCGCCGGTTCGCAGGTTCGCTCGTTCGCCCACAGCCACACC
ACGACACCAACTACCGCGCGCCGCCGCTTGCTCCGCCTCACCCTACCAAC
GCACACCTTACGGGCGTAGCCGTGGCTACCCACTTGATTGATATGATTGA
TTGATTGATTGATTGATTGATTGATAACCACATTCACAACCGACCGGCCC
GCCATTATTTGCAATTTGAAAAAAAATGGCTGGCGATCTCGCTCGCTGTA
ACAGTTCGCGATGAAAGCACTGAGGCGTGTGTTGTACCGGGAAGCGGGGG
GTGGAATGATCGATTCCTCTTGGCCACGGACGGGATTAGTTCGGATATGG
TCAATCGGTCATACGAATAGGTGACCACGGCTACGTCCACGAGGTGTGCG
TTGGCAGGACGATATGTCGGTGGCGGTAGTGCCTACGGCAGGCGTCAACC
CACGGTGGAAGCCGAGCGTGCGGGGGCGGGGACAAGAGCGCATAGGAATT
CGTGACTCTGTTTATTCCATATATGTTTAGCATGAGCAAGTTTTGGCATC
AAGGGTCCATTCTAAAACTCTATGTAAAAAAACGTGCAAAGCGCTGTTAA
TTAATATAAATACATGTGAGGAACGAGTGCACACATGATGGGGGGTATAA
CCACATGCTACCTTTGTCGTTGCATTTATGGACGTCTTGAGTTGTTGCTC
ACAAGGGGCCACACGTGGGTGGCTTGGTCGGTTCATGATTGATTGGTTGA
TTTTGATCGATTGTCACACATACAACCGACCGGCCTGCCATTTTTGCAAT
TACAAATTAAAAGTGGATGCTGATCCCGCTAACTCGTGGTCACATGAAGG
CACAAGAGCAAGTAAGCGAAATCCAGCACCCCTACACCGAACAAAAAAAT
GACGTCCAGACATCGCAAGAAAGTATAACCCACTTGCTGCTCGGAGCGCC
TACCCCCCTGATTTACAGGAAAACTGTCATAATAATGTGCTATGAACCAA
AGCGCGAGCTACACGATTTCTGTCTGACGTGCTGCCCGTCACTAATCTAC
CATATAATAAGCTTCCTTTCGCGCGACACGCTTTCCTGCCTGCCATACGT
CTGTGTGTTAAGGTGAAAGGCATGTCTGCCGATGATGTCGCTGTTGTCCA
GATCAAGACCCGCTCCAAAAGCGGTGCCTTCCTGCCTTGCGAAGAAGAGG
TCGGTAGGTACGTATAACGTCCTGTGCGTGGGTGATCTGCTTGGGGCGGG
GAAGGCGAATCCATGGAGTTCCTTGGGTCTCGTCAAAGCGTTAGGCGCCG
AATCCTAAGCCCCACTTTGTGTTGTATTCAAAGCCCCGCTTCGTCTTGCG
GGTAAATCATTGAAGCCTTGAGGGATGTCCCTGGGTACTCAAGAGATGGT
ACGAAGCTTCTTTTACACGCGCTTTTAGTATTTATCGTATGTGTTGGGAT
TTGTTTCGCGCGCTTCCTGTTATTTTTTAAGCTTTTTTCACAACGTCTCA
GTGTGGAGCGAATGGGGGTGGGCACTGTACGTATGTAGGTTTTTACACGT
GCTTGCTGCGGCATGGGGAACACGCCAACACCTACAATAATGCTGTTACG
GAAGACCATAGTTAACAGGTCCAAATCTGCCATAAGTCTCAACTTGTAAA
AAACAAAATAGGCCGGAATTATCGAGATTTCATGGTCGATGTTGTTGTGT
AAGGCCAGACCTCGCGCTTTTTTTCTTCATGAGATTTTTTATGTTTGGGT
ATTCATGATCGGAAACAGTTCGGTATTCATGGTCGTGACATTTGGTCCTG
ATTACTCTGCACCTCCGTGATAGCAGCATAACGCGCGCACATCCGTTTCC
CCCCCGCCAGTTTTGCACACCTTCGCACGGCTAGCTAGGTTTATCCCCTG
AAACAATATGAACTATTTCAAAAACATGGGGCAAGCGTTGACGTCCATTT
TTTCCACTGAATTTTTCTGAAGGGAGGAAACATTATCCAATCTGCAGTAC
ACCTATGGAGATTTGTTTACCTCACATGTATGTAATGCTGACTGCGGTTT
ACATTGCAGCAGTACGTATATCATATGCTACGGTATCGTCGTGGAAATGA
CTTTTGTCCAGGCGACATTGTTGTGTGTAGCTCATAGAAGTGGCGTGCTT
TTTTCGTGCGCCAAGAAATTCGTCCCTGCTCCCTTCACACTTGACACCCC
AAGGGTTGTCGACACGGCTATGTCATCCTCCCCGTCGAGCGTGGTGGTGG
TCCACTGTGTGGTCGGATCGAAGACGGGTATCTGCTCCCCCCCGGTGGAC
GCCTTGGTCAACCTGCAGGAACGCTACGGAGAGCGACTCTTGGTAAGCTG
CTCGGAAAAACAAACTTCCCGGCGTCCTACCTTTGACCGGTATAGGCAAG
ATTTGTCGCACGTCGTATGTTTTTTCACGGCTCTCCCGACAAGCCAAGCT
CAAGCCAAATATGAAGCCGAGCGACTGCGTGCCGCCGCGTGTGCTAGGTG
TTCTTGTGAGCGCCGCACGATGTTGTCATGCACAAAGCGGGATCGGCAAC
CATTGGCTGGGCCTGATCGACCCGGGCCGGGCCGGTCGTTGTATACGAAA
CGCGTGATAAAATCAATAAAATATCAAAAACTCAAATCATCCTAAAATCT
TGTTGACATTATACATACCGTGGATAGATACCAGGTCCCCTAGATATGAC
ATTCCCTTGAGAATGTAAAGTGCAGACGCCTCCTTACACGCATACATCAC
CTCCCCGCGGGACACTCTTGCCTCGTGGCGGTGCCCTCGCGGGTGTGGTT
GCGCAAGACCACCTCGGCTTGTCCAAGACCCCACCTCGGTGTGTACTCCA
CGTCACCCATCAAAAAAAGAATTGTTTGCCTAGGGCATCGCCTCATGCTT
TAGGCTCTGCCCACAGTTTGGTTGATTTGATTGATTGATTCTCACACATG
CAACCGACCGGCCCGCCATTTTTTCTATTTCTAAATTGGATGCTTATCCC
GCTCGTGGTCACATCAAGGCNNNNNNNNNNAGCAATTGCAATCCAGCACC
CCTACACCGAACAAAAAAGCTGATGGCCAGACATGACAGAGATATACAGT
AAAGCCCAAATTGGCGTCGACGGCAGGACAAGTGTATATCATATATAAAT
ATGCACCTCTGTCCCGCGTCCGGCCCAGCCGTTGGCACCGATACCAGATA
CCCTACCATGCGCGCTTTCACAACCAATCCTGCGCCGTGGGTATCGTACC
CCGAATTTATTTCAATGCACGAGGTGTAATATTGATTGATTTGATGCATT
GATTACACCGCGCGCCCCGTTGTTGAAGTGGTAAACCAACGGCCAGTAAA
CGGAGGATTCGGGTTTGAGTCCGGGCAAAGTCGATATTTACTTGTTTGCT
CCACCTCCGCCGCGGAAAGCGCGACAGCGTGAGTAAGCAAAATCCGAGAA
ATCGGCGAGCTGCGGGAGTGCCGAACCTATTGATTGATTGATTGATTGAT
TGACTGATTGATTTGCACACGTATAGCCGATCGACTTAATCCGACCCGAC
TTGTGGTCAGACACGCAAAGAGCCTTTGCGCGATAAAAATCGCAGGTCAG
AACCGGGGATAAGATAAGAGAGATGGGATGACCCCTTGGGAGTTAGTGGT
GTATGTGGTAGTGTGCCCCTTCCGGTCATTTTCTATCCTTCACAACATGT
AACCCCACGGGGGGTTATGACCCACACCGGCGATGACGCCTACACGTGCC
AAGCCGGTTTGCGCGGTTGATGCAAATTAGTAAAAGTGACCACAGACGGA
CCTCGGACAAGCAAGTCTATCAAATGTGTGCCAAAAACAAAATGACACAA
ATGATTAGGAAACGTACAGCCGATCGGCTTAATCCGACCCGACTTGTGGT
CAGATGCTTAGAGCCTCTATAGCAAAGGGTCGACGAGAAAGTAACTATTA
GATATTTAGAAATCCTATATACTTTAGTTGTACAAAGACAGCAATAACGT
CCCTGGTAATACTTACTAGTACGGGGGACGATAGTTAACAGGTCCAAATT
TGCCACAAGTCTCAACCTAAAAAAATCAAATTAGGCTGGAATTATCGAGA
GTTCAATCTCGATATATGGCCATATCTCGTGTCTTTCTTCATTTTTCTTG
AGATTTTTGTTGTTTGGGCAAGGTTTGGGTGTGATATTATTCCTGATTAC
TCTGTACCTTCGTAATTTTACTATAGCACAAGAGAGAAGCAATAGTATCA
CCATATACTTCGTATGTACTATAAATAGTATACGAAACGTCGGAAGAGGA
ATCGGGGTGTACATACCGTAATACTCTGCGTCAACGACCCCTCACCGCTA
AAGACCCCCCCTCGTATCATTTTCCGGGAAATTTCTGCTCGGTATCGGCT
AAACGGGAAAAAAACAGAGAACGACCCCCGGATCGTTCACCCCAATTATT
ACGATAAACGGATTACTGAAGATTCGGAATCTTGTAATTCTCGTGAAATA
CCCTCCCTCCTCCCGCATCGCTTTTTTTTTTTTTTTTTTTTCCCAGGTTG
TCGTGGACGCGTGCCAGCTGCGCACGGTGACGGGCAACATCCGAAAATAC
GCGGCCCTCGGGTTCCTGACGCTCGTGACGGGTTCGAAGTTCTATTGCGC
GCCCCCGTTCTGCGGCGCCGTGCTTTTCCCCCCGTCGGCCCTGGCGGAAC
TGGAGGCGGGACACGAGCACCTTCCCGCCGGATTTGAGGATTACTTCACC
AGACACGAGGTGTGTGTGTGA

Coding sequence (CDS) from alignment at S-dermatodea_contig13163:935..6505-

>mRNA_S-dermatodea_contig13163.1892.1 ID=mRNA_S-dermatodea_contig13163.1892.1|Name=mRNA_S-dermatodea_contig13163.1892.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1020bp|location=Sequence derived from alignment at S-dermatodea_contig13163:935..6505- (Saccorhiza dermatodea SderLu1190fm monoicous)
CACTTCAGCGCGCTAACCCCTCGAGGGGTTACCGGTCACCCCGAGCATCA
TCACTTCAGCGCGCTAACCCCTCGAGGGGTTACCGGTCACCCCGAGCATC
ATGTGAAAGGCATGTCTGCCGATGATGTCGCTGTTGTCCAGATCAAGACC
CGCTCCAAAAGCGGTGCCTTCCTGCCTTGCGAAGAAGAGGTCGGTAGGTG
AAAGGCATGTCTGCCGATGATGTCGCTGTTGTCCAGATCAAGACCCGCTC
CAAAAGCGGTGCCTTCCTGCCTTGCGAAGAAGAGGTCGGTAGGGTTGTCG
ACACGGCTATGTCATCCTCCCCGTCGAGCGTGGTGGTGGTCCACTGTGTG
GTCGGATCGAAGACGGGTATCTGCTCCCCCCCGGTGGACGCCTTGGTCAA
CCTGCAGGAACGCTACGGAGAGCGACTCTTGGGTTGTCGACACGGCTATG
TCATCCTCCCCGTCGAGCGTGGTGGTGGTCCACTGTGTGGTCGGATCGAA
GACGGGTATCTGCTCCCCCCCGGTGGACGCCTTGGTCAACCTGCAGGAAC
GCTACGGAGAGCGACTCTTGGTTGTCGTGGACGCGTGCCAGCTGCGCACG
GTGACGGGCAACATCCGAAAATACGCGGCCCTCGGGTTCCTGACGCTCGT
GACGGGTTCGAAGTTCTATTGCGCGCCCCCGTTCTGCGGCGCCGTGCTTT
TCCCCCCGTCGGCCCTGGCGGAACTGGAGGCGGGACACGAGCACCTTCCC
GCCGGATTTGAGGATTACTTCACCAGACACGAGGTGTGTGTGTGAGTTGT
CGTGGACGCGTGCCAGCTGCGCACGGTGACGGGCAACATCCGAAAATACG
CGGCCCTCGGGTTCCTGACGCTCGTGACGGGTTCGAAGTTCTATTGCGCG
CCCCCGTTCTGCGGCGCCGTGCTTTTCCCCCCGTCGGCCCTGGCGGAACT
GGAGGCGGGACACGAGCACCTTCCCGCCGGATTTGAGGATTACTTCACCA
GACACGAGGTGTGTGTGTGA