prot_S-dermatodea_contig1316.1890.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1316.1890.1
Unique Nameprot_S-dermatodea_contig1316.1890.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length115
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1316.1890.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..111
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..55
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 112..115
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 56..61
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 87..91
NoneNo IPR availableTMHMMTMhelixcoord: 89..111
NoneNo IPR availableTMHMMTMhelixcoord: 25..47
NoneNo IPR availableTMHMMTMhelixcoord: 62..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1316contigS-dermatodea_contig1316:21209..21553 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1316.1890.1mRNA_S-dermatodea_contig1316.1890.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1316 21209..21553 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1316.1890.1 ID=prot_S-dermatodea_contig1316.1890.1|Name=mRNA_S-dermatodea_contig1316.1890.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=115bp
MPLGDLGEKAPLAHLSRRLLTGKPFFLSRTTGLPVSFYVAHLIFLFVQFI
GARLMTSTMSRVWSVVVELAVVGGVFPPAACCLLPPSRWWVFLFGVFVSR
CLLSFLLESVVPAES
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