prot_S-dermatodea_contig1314.1883.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1314.1883.1
Unique Nameprot_S-dermatodea_contig1314.1883.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length268
Homology
BLAST of mRNA_S-dermatodea_contig1314.1883.1 vs. uniprot
Match: D7G5K8_ECTSI (Scaper protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K8_ECTSI)

HSP 1 Score: 346 bits (888), Expect = 1.140e-105
Identity = 208/245 (84.90%), Postives = 218/245 (88.98%), Query Frame = 0
Query:   29 SGSPILRAGEGSSVYNPARSESSSGASCFGNERG-----SQDAFDEGWVPFSHRELQKKLSSPQRNPQRKILSAAEAKLRQERRQMVAELNRAQLASGMAEKLKQHEERARVVRFRKEEQLLKAEEEARRRMEGADARRREHRRGIVRKANDANSKVEEVLFMNKLTVEDLKITLQMKLAEVDRRIQSGRARRQQLLTGISDRQRKRTKDKAAQMSERRLEAEEAAAMRWEALQKRLEAVQERRR 268
            SG P+L      SV    R+ S SGASCFG ERG     S +A +EGW PFSHRELQKKLSSPQR PQRKILSAAEAKLRQERRQMVAELNRAQLASG+ EKLKQHEERAR VRFRKEEQLLKAEEEA+R+MEGADARR+EHRRGIVRKANDANSKVEEVLFMNKLTVEDLKITLQMKLAEVDRRIQSGRARRQQLL GISDRQRKRT+DKAAQMSERRLEAE AAAMRWEALQKRLEAVQ+RRR
Sbjct: 1104 SGYPLLAG----SVPPLTRTPSDSGASCFGVERGGGGSSSHEACEEGWAPFSHRELQKKLSSPQRKPQRKILSAAEAKLRQERRQMVAELNRAQLASGITEKLKQHEERARGVRFRKEEQLLKAEEEAKRKMEGADARRKEHRRGIVRKANDANSKVEEVLFMNKLTVEDLKITLQMKLAEVDRRIQSGRARRQQLLAGISDRQRKRTRDKAAQMSERRLEAESAAAMRWEALQKRLEAVQQRRR 1344          
BLAST of mRNA_S-dermatodea_contig1314.1883.1 vs. uniprot
Match: A0A6H5J638_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J638_9PHAE)

HSP 1 Score: 276 bits (705), Expect = 4.010e-81
Identity = 169/225 (75.11%), Postives = 179/225 (79.56%), Query Frame = 0
Query:   70 GWVPFSHRELQKKLSSPQRNPQRKILSAAEAKLRQERR-----------------------------------QMVAELNRAQLASGMAEKLKQHEERARVVRFRKEEQLLKAEEEARRRMEGADARRREHRRGIVRKANDANSKVEEVLFMNKLTVEDLKITLQMKLAEVDRRIQSGRARRQQLLTGISDRQRKRTKDKAAQMSERRLEAEEAAAMRWEALQKR 259
            GW PFSHRELQKKLSSPQR PQRKILSAAEAKLRQER+                                   +MVAELNRAQLASG+ EKLKQHEERAR VRFRKEEQLLKAEEEA+R+MEGADARR+EHRRGIVRKANDANSKVEEVLFMNKLTVEDLKITLQMKLAEVDRRIQSGRARRQQLL GISDRQRKRT+DKAAQMSERRLEAE AA    +A ++R
Sbjct:    8 GWAPFSHRELQKKLSSPQRKPQRKILSAAEAKLRQERKYKEANLSILMVPIWSNRVVFGYYLIPVYAAEASGAEMVAELNRAQLASGVTEKLKQHEERARGVRFRKEEQLLKAEEEAKRKMEGADARRKEHRRGIVRKANDANSKVEEVLFMNKLTVEDLKITLQMKLAEVDRRIQSGRARRQQLLAGISDRQRKRTRDKAAQMSERRLEAESAANRHTQARERR 232          
BLAST of mRNA_S-dermatodea_contig1314.1883.1 vs. uniprot
Match: A0A7S2WA51_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WA51_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 5.240e-10
Identity = 52/131 (39.69%), Postives = 78/131 (59.54%), Query Frame = 0
Query:   77 RELQKKLSSPQRNPQRKILSAAEAKLRQERRQMVAELNRAQLASGMAEKLKQHEERARVVRFRKEEQLLKAEEEARRRMEGADARRREHRRGIVRKANDANSKVEEVLFMNKLTVEDLKITLQMKLAEVDR 207
            R +  KLSSP R    K LS AEAK +QE R   A  NR ++      +L+Q  E+AR V+ R+ ++   A  +   ++  ++ R  +H + I RKA + NSKVEEV+F+N LT + ++ TLQ +L EV+R
Sbjct:  390 RAMHHKLSSPDR----KRLSPAEAKRKQEERHETAARNRDRIEEERQRRLEQAAEKARQVKVRQGQKRASAGGKLALKLSASETRHAQHIQAIARKAANENSKVEEVIFINGLTADAVRATLQQRLVEVER 516          
BLAST of mRNA_S-dermatodea_contig1314.1883.1 vs. uniprot
Match: A0A7S2WB00_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WB00_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 5.870e-10
Identity = 52/131 (39.69%), Postives = 78/131 (59.54%), Query Frame = 0
Query:   77 RELQKKLSSPQRNPQRKILSAAEAKLRQERRQMVAELNRAQLASGMAEKLKQHEERARVVRFRKEEQLLKAEEEARRRMEGADARRREHRRGIVRKANDANSKVEEVLFMNKLTVEDLKITLQMKLAEVDR 207
            R +  KLSSP R    K LS AEAK +QE R   A  NR ++      +L+Q  E+AR V+ R+ ++   A  +   ++  ++ R  +H + I RKA + NSKVEEV+F+N LT + ++ TLQ +L EV+R
Sbjct:  543 RAMHHKLSSPDR----KRLSPAEAKRKQEERHETAARNRDRIEEERQRRLEQAAEKARQVKVRQGQKRASAGGKLALKLSASETRHAQHIQAIARKAANENSKVEEVIFINGLTADAVRATLQQRLVEVER 669          
BLAST of mRNA_S-dermatodea_contig1314.1883.1 vs. uniprot
Match: A0A835ZAD3_9STRA (SCAPER_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAD3_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 8.330e-8
Identity = 58/162 (35.80%), Postives = 69/162 (42.59%), Query Frame = 0
Query:  169 IVRKANDANSKVEEV--------------------------------------LFMNKLTVEDLKITLQMKLAEVDRRIQSGRARRQQLLTGISDRQ-----------------------------------RKRTKDKAAQMSERRLEAEEAAAMRWEALQ 257
            +VRKAND N KV EV                                      LFMNKLTVEDLKITLQM+L EV+RRI  GR RRQ  L GI+ RQ                                   R R ++ A  M+ER+ E ++AAA RW+ LQ
Sbjct:  777 VVRKANDENGKVYEVSATHRSVEVDVGVAYHHHLPVSXXXXXXXXXXXXXXXXLFMNKLTVEDLKITLQMRLHEVERRIMGGRMRRQHHLVGIAARQVVTLLLCLMMCXXXXXXXXXXXXXXXXXXXXXXXQRTRAREMALSMTERQSEMDKAAAERWQRLQ 938          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1314.1883.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G5K8_ECTSI1.140e-10584.90Scaper protein n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A6H5J638_9PHAE4.010e-8175.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2WA51_9STRA5.240e-1039.69Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2WB00_9STRA5.870e-1039.69Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A835ZAD3_9STRA8.330e-835.80SCAPER_N domain-containing protein n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 95..119
NoneNo IPR availableCOILSCoilCoilcoord: 228..248
NoneNo IPR availablePANTHERPTHR31434FAMILY NOT NAMEDcoord: 70..266

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1314contigS-dermatodea_contig1314:12490..18455 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1314.1883.1mRNA_S-dermatodea_contig1314.1883.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1314 12490..18456 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1314.1883.1 ID=prot_S-dermatodea_contig1314.1883.1|Name=mRNA_S-dermatodea_contig1314.1883.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=268bp
DTEEQCAILAGKSDSGEPTGRLWSSPKSSGSPILRAGEGSSVYNPARSES
SSGASCFGNERGSQDAFDEGWVPFSHRELQKKLSSPQRNPQRKILSAAEA
KLRQERRQMVAELNRAQLASGMAEKLKQHEERARVVRFRKEEQLLKAEEE
ARRRMEGADARRREHRRGIVRKANDANSKVEEVLFMNKLTVEDLKITLQM
KLAEVDRRIQSGRARRQQLLTGISDRQRKRTKDKAAQMSERRLEAEEAAA
MRWEALQKRLEAVQERRR
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