prot_S-dermatodea_contig13127.1871.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig13127.1871.1
Unique Nameprot_S-dermatodea_contig13127.1871.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length37
Homology
BLAST of mRNA_S-dermatodea_contig13127.1871.1 vs. uniprot
Match: A0A6H5KS17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS17_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 2.150e-15
Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 0
Query:    1 MIRNGTTGDWIGTFVGHKGAVWGVALDDTGMLAATGS 37
            MIRNG+TGDWIGTFVGHKGAVWGVALDDTG+LAAT S
Sbjct:    1 MIRNGSTGDWIGTFVGHKGAVWGVALDDTGLLAATAS 37          
BLAST of mRNA_S-dermatodea_contig13127.1871.1 vs. uniprot
Match: D8LST9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LST9_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 2.450e-15
Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 0
Query:    1 MIRNGTTGDWIGTFVGHKGAVWGVALDDTGMLAATGS 37
            MIRNG+TGDWIGTFVGHKGAVWGVALDDTG+LAAT S
Sbjct:   47 MIRNGSTGDWIGTFVGHKGAVWGVALDDTGLLAATAS 83          
BLAST of mRNA_S-dermatodea_contig13127.1871.1 vs. uniprot
Match: A0A836DQ80_9ROSI (Transducin family protein n=1 Tax=Salix suchowensis TaxID=1278906 RepID=A0A836DQ80_9ROSI)

HSP 1 Score: 60.1 bits (144), Expect = 4.920e-11
Identity = 26/37 (70.27%), Postives = 29/37 (78.38%), Query Frame = 0
Query:    1 MIRNGTTGDWIGTFVGHKGAVWGVALDDTGMLAATGS 37
            M+RNG TGDWIGTF GHKGAVW   LD   +LAA+GS
Sbjct:    1 MLRNGETGDWIGTFEGHKGAVWSCCLDTNALLAASGS 37          
BLAST of mRNA_S-dermatodea_contig13127.1871.1 vs. uniprot
Match: A0A7S3XEH0_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3XEH0_9CHLO)

HSP 1 Score: 63.5 bits (153), Expect = 9.770e-11
Identity = 28/37 (75.68%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    1 MIRNGTTGDWIGTFVGHKGAVWGVALDDTGMLAATGS 37
            M+RNGTTGDWIGTF GHKGAVW   L+ T  LAATGS
Sbjct:  109 MLRNGTTGDWIGTFEGHKGAVWSACLNSTATLAATGS 145          
BLAST of mRNA_S-dermatodea_contig13127.1871.1 vs. uniprot
Match: A0A7M7JNH2_VARDE (Uncharacterized protein n=2 Tax=Varroa TaxID=62624 RepID=A0A7M7JNH2_VARDE)

HSP 1 Score: 63.5 bits (153), Expect = 9.930e-11
Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    1 MIRNGTTGDWIGTFVGHKGAVWGVALDDTGMLAATGS 37
            M+R+G TGDWIGTF GHKGAVW V LD +G LAATGS
Sbjct:   44 MLRDGVTGDWIGTFEGHKGAVWSVCLDGSGKLAATGS 80          
BLAST of mRNA_S-dermatodea_contig13127.1871.1 vs. uniprot
Match: A0A7J7PRN3_9CHLO (WD40 repeat-like protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PRN3_9CHLO)

HSP 1 Score: 63.2 bits (152), Expect = 1.220e-10
Identity = 27/37 (72.97%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    1 MIRNGTTGDWIGTFVGHKGAVWGVALDDTGMLAATGS 37
            M+R+GTTGDWIGTF+GHKG VW  ALD +  LAATGS
Sbjct:   44 MLRSGTTGDWIGTFIGHKGCVWSCALDPSATLAATGS 80          
BLAST of mRNA_S-dermatodea_contig13127.1871.1 vs. uniprot
Match: A0A1V9XVI8_9ACAR (Serine-threonine kinase receptor-associated protein-like n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9XVI8_9ACAR)

HSP 1 Score: 63.2 bits (152), Expect = 1.360e-10
Identity = 28/37 (75.68%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    1 MIRNGTTGDWIGTFVGHKGAVWGVALDDTGMLAATGS 37
            M+R+G TGDWIGTF GHKGAVW V LD  G LAATGS
Sbjct:   44 MLRDGVTGDWIGTFEGHKGAVWSVCLDGVGKLAATGS 80          
BLAST of mRNA_S-dermatodea_contig13127.1871.1 vs. uniprot
Match: A0A835YS18_9STRA (WD40-repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS18_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.570e-10
Identity = 28/37 (75.68%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    1 MIRNGTTGDWIGTFVGHKGAVWGVALDDTGMLAATGS 37
            M+R G TGDWIGTF GHKGAVWGVALD   M+AAT S
Sbjct:   48 MLRRGDTGDWIGTFEGHKGAVWGVALDPQAMIAATAS 84          
BLAST of mRNA_S-dermatodea_contig13127.1871.1 vs. uniprot
Match: A0A0L7L1M4_9NEOP (Putative serine-threonine kinase receptor-associated protein n=1 Tax=Operophtera brumata TaxID=104452 RepID=A0A0L7L1M4_9NEOP)

HSP 1 Score: 58.9 bits (141), Expect = 1.930e-10
Identity = 26/37 (70.27%), Postives = 29/37 (78.38%), Query Frame = 0
Query:    1 MIRNGTTGDWIGTFVGHKGAVWGVALDDTGMLAATGS 37
            M+R G TGDWIGTF GHKGAVWGVAL     LAA+G+
Sbjct:   43 MLRQGETGDWIGTFEGHKGAVWGVALSQNANLAASGA 79          
BLAST of mRNA_S-dermatodea_contig13127.1871.1 vs. uniprot
Match: T1PDW2_MUSDO (WD domain protein n=2 Tax=Musca domestica TaxID=7370 RepID=T1PDW2_MUSDO)

HSP 1 Score: 62.4 bits (150), Expect = 2.260e-10
Identity = 27/37 (72.97%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    1 MIRNGTTGDWIGTFVGHKGAVWGVALDDTGMLAATGS 37
            M+R G TGDW+GTF GHKGAVWGVAL+ T  LAATG+
Sbjct:   44 MLRQGDTGDWVGTFEGHKGAVWGVALNKTATLAATGA 80          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13127.1871.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KS17_9PHAE2.150e-1591.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LST9_ECTSI2.450e-1591.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836DQ80_9ROSI4.920e-1170.27Transducin family protein n=1 Tax=Salix suchowensi... [more]
A0A7S3XEH0_9CHLO9.770e-1175.68Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
A0A7M7JNH2_VARDE9.930e-1175.68Uncharacterized protein n=2 Tax=Varroa TaxID=62624... [more]
A0A7J7PRN3_9CHLO1.220e-1072.97WD40 repeat-like protein n=1 Tax=Scenedesmus sp. N... [more]
A0A1V9XVI8_9ACAR1.360e-1075.68Serine-threonine kinase receptor-associated protei... [more]
A0A835YS18_9STRA1.570e-1075.68WD40-repeat protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A0L7L1M4_9NEOP1.930e-1070.27Putative serine-threonine kinase receptor-associat... [more]
T1PDW2_MUSDO2.260e-1072.97WD domain protein n=2 Tax=Musca domestica TaxID=73... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..37
e-value: 2.7E-8
score: 35.4
NoneNo IPR availablePANTHERPTHR19877:SF4F9L1.42 PROTEINcoord: 1..37
NoneNo IPR availablePANTHERPTHR19877WD40 REPEAT PROTEINcoord: 1..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13127contigS-dermatodea_contig13127:242..352 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13127.1871.1mRNA_S-dermatodea_contig13127.1871.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig13127 242..358 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig13127.1871.1 ID=prot_S-dermatodea_contig13127.1871.1|Name=mRNA_S-dermatodea_contig13127.1871.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=37bp
MIRNGTTGDWIGTFVGHKGAVWGVALDDTGMLAATGS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf