prot_S-dermatodea_contig13110.1864.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig13110.1864.1
Unique Nameprot_S-dermatodea_contig13110.1864.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length126
Homology
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BLAST of mRNA_S-dermatodea_contig13110.1864.1 vs. uniprot
Match: D8LMA8_ECTSI (Nischarin/ IRAS/ imidazoline receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA8_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 6.160e-30
Identity = 89/125 (71.20%), Postives = 98/125 (78.40%), Query Frame = 0 
Query:    1 SVCRCGLRELDPSLRLLPRVRRLSLAHNRVGTVDFFQDCAALEVLDMSFNRLESVENIHRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLSALPLLRRIALEGNPLEAE 125
            S+C+CGLRELDPSLRLLPRVRRLS+AHNR+  VDFFQDC +LEVLD+S NRL SVENIH V           XXXXXXXXXXXXXXXXXXXXXXXX       ARLS LP+LRR+ L GNP+EAE
Sbjct:  561 SICKCGLRELDPSLRLLPRVRRLSMAHNRLSRVDFFQDCGSLEVLDLSHNRLTSVENIHAVLGNLRSLKLRGXXXXXXXXXXXXXXXXXXXXXXXXIEDLKEAARLSTLPMLRRVWLNGNPVEAE 685
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BLAST of mRNA_S-dermatodea_contig13110.1864.1 vs. uniprot
Match: A0A6H5K372_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K372_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 3.490e-28
Identity = 100/125 (80.00%), Postives = 107/125 (85.60%), Query Frame = 0 
Query:    1 SVCRCGLRELDPSLRLLPRVRRLSLAHNRVGTVDFFQDCAALEVLDMSFNRLESVENIHRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLSALPLLRRIALEGNPLEAE 125
            SVC+CGLRELD SLRLLPRVRRLSLA+NR   VDFFQDC +LEVLD+S NRL SVENIH V XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      ARLS LP+LRR+ L GNP+EAE
Sbjct:  469 SVCKCGLRELDSSLRLLPRVRRLSLANNRFSRVDFFQDCGSLEVLDLSHNRLNSVENIHAVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLKEAARLSTLPMLRRVWLNGNPVEAE 593
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13110.1864.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMA8_ECTSI6.160e-3071.20Nischarin/ IRAS/ imidazoline receptor n=1 Tax=Ecto... [more]
A0A6H5K372_9PHAE3.490e-2880.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 18..75
e-value: 6.1E-8
score: 32.3
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 86..98
e-value: 1.0
score: 9.6
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 41..62
score: 7.265
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 86..107
score: 7.858
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 64..85
score: 7.08
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 19..40
score: 4.801
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..125
e-value: 2.6E-29
score: 103.4
NoneNo IPR availablePANTHERPTHR15454NISCHARIN RELATEDcoord: 15..123
NoneNo IPR availableSUPERFAMILY52075Outer arm dynein light chain 1coord: 4..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13110contigS-dermatodea_contig13110:169..1015 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13110.1864.1mRNA_S-dermatodea_contig13110.1864.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig13110 169..1015 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig13110.1864.1 ID=prot_S-dermatodea_contig13110.1864.1|Name=mRNA_S-dermatodea_contig13110.1864.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=126bp
SVCRCGLRELDPSLRLLPRVRRLSLAHNRVGTVDFFQDCAALEVLDMSFN
RLESVENIHRVLGNLRALNLQGNRIGTTAGLERVFSLEEVDLSHNAIRGL
EEVARLSALPLLRRIALEGNPLEAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf