prot_S-dermatodea_contig13054.1841.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig13054.1841.1
Unique Nameprot_S-dermatodea_contig13054.1841.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length259
Homology
BLAST of mRNA_S-dermatodea_contig13054.1841.1 vs. uniprot
Match: D8LNN1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNN1_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 4.980e-44
Identity = 98/228 (42.98%), Postives = 129/228 (56.58%), Query Frame = 0
Query:    1 MVLNCWLKDGALGVIKALKFFELVGSNTLALTNLAICVNLAVIVHSHRTFSRVRGASSPRLMVMFVLVSAVVAAVSVPFGDIWVATGLSVYQNGKSPGRQRVLVISYFLVEAICSVVMIVIVALLLLFRRPELRQVWKLHRRIKTHFALTMIAITANVAITAGGIFYVKNG-SPIWLVIGSWILRDIHIALDTLVLYTALGVSSFDLELEPRHGPSRNVSCIESYAPP 227
            MVL CW      G +KALKF ELV SN LA+TNLAIC NLA+++ SHRT +RV+  SSP L+ + + VS  VA  + PF    V +G       +       L +S F +E +  + M VIVA LLLFR  E+++ WK+H RI+ +F LT+I  T N+A+   G  YV  G     L++ +W  R IHIALDT VLY  LGV +     E   GP     C  + A P
Sbjct:    1 MVLVCWAGSNVTGFVKALKFLELVASNMLAITNLAICANLALVIMSHRTLARVKSFSSPSLVFLSLAVSIAVAVAAAPFWQTTVVSGTGFAVRNEDQRSGDWLAVSRFFLEFLVGICMFVIVAWLLLFRINEVKECWKVHARIRYYFGLTLIGTTVNLALGVCGTIYVVGGREKSLLIVLTWTFRHIHIALDTFVLYGVLGVPAATGHDE---GPDAQRRCSAAAAAP 225          
BLAST of mRNA_S-dermatodea_contig13054.1841.1 vs. uniprot
Match: A0A6H5K8K6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K6_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 1.820e-43
Identity = 95/256 (37.11%), Postives = 143/256 (55.86%), Query Frame = 0
Query:    1 MVLNCWLKDGALGVIKALKFFELVGSNTLALTNLAICVNLAVIVHSHRTFSRVRGASSPRLMVMFVLVSAVVAAVSVPFGDIWVATGLSVYQNGKSPGRQRVLVISYFLVEAICSVVMIVIVALLLLFRRPELRQVWKLHRRIKTHFALTMIAITANVAITAGGIFYV-KNGSPIWLVIGSWILRDIHIALDTLVLYTALGVSSFDLELEPRHGPSRNVSCIESYAPPTKRSGVSSESVIGRVPCFSGV-RPQHQQ 254
            M+  CW+ +   G IKALK+ E   SN LA+TNLAIC+NLA++V+SHRT SRV   S+P L+++F+ +S V AA SVPF  I V +G + +       +   +++S  ++E +  + M +IV+ L+ FR   +++ WKLH RI+ +F LT+I    N+A+   G  YV +  +  +L+  +W  R  H+ALDT+VLY  LG    D                E        SG SS    GR+P  SG+ RP + +
Sbjct:    8 MISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVNSVSTPALVLLFLAISVVAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFIIVSWLMAFRMRAIKECWKLHARIRYYFVLTVIGTAVNLALGISGFSYVFRANAGEYLLSLTWAFRYAHVALDTIVLYGVLGTRHMD----------------EGGGSAASTSGTSS----GRLPASSGLPRPSNHR 243          
BLAST of mRNA_S-dermatodea_contig13054.1841.1 vs. uniprot
Match: D8LNP0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP0_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 5.470e-38
Identity = 86/219 (39.27%), Postives = 131/219 (59.82%), Query Frame = 0
Query:    1 MVLNCWLKDGALGVIKALKFFELVGSNTLALTNLAICVNLAVIVHSHRTFSRVRGASSPRLMVMFVLVSAVVAAVSVPFGDIWVATGLSVYQNGKSPGRQRVLVISYFLVEAICSVVMIVIVALLLLFRRPELRQVWKLHRRIKTHFALTMIAITANVAITAGGIFYVKNGSPIW--LVIGSWILRDIHIALDTLVLYTALGVSSFD--LELEPRHGPS 215
            M+  CW  +     IK LKF EL  SN LA+TNLAICVNL++IV S R  S V+  S+ +L+++F+ +SA +AA++VPF  + V +G   ++ G++      ++IS F+VE +  + M VIV+ LLLFR  E+++ W +H  ++ +F LT++    N+ +   G  YV +    W  L+I SW  R + IALDT+VL++ L   S D   E  P  G S
Sbjct:    1 MISVCWAGENLATFIKTLKFLELFASNMLAITNLAICVNLSLIVMSRRPQSHVKSISTHKLVLLFLALSAGLAAIAVPFWGLTVLSGTGFWELGENKRDHEFVMISTFMVEFLVGICMFVIVSWLLLFRMTEIKECWMMHACLRYYFGLTLLGTVGNLTLGVCGTIYVISDMA-WPLLMIFSWGFRQVRIALDTIVLHSVLATKSVDERAETPPTDGAS 218          
BLAST of mRNA_S-dermatodea_contig13054.1841.1 vs. uniprot
Match: D8LNM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM4_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 9.460e-38
Identity = 81/168 (48.21%), Postives = 109/168 (64.88%), Query Frame = 0
Query:    1 MVLNCWLKDGALGVIKALKFFELVGSNTLALTNLAICVNLAVIVHSHRTFSRVRGASSPRLMVMFVLVSAVVAAVSVPFGDIWVATGLSVYQNGKSPGRQRVLVISYFLVEAICSVVMIVIVALLLLFRRPELRQVWKLHRRIKTHFALTMIAITANVAITAGGIFYV 168
            MV  CW  D    +IK LKFFEL  SN LA+TNLAICVNLA+IV SHRT SRVR AS+P L+++F+ +S  VAA+SVPF    V +G + +           +V++ F VE    + M+VIV  L++FRR E++Q WK+H RI+ +F LT+IA   N+A+   G  YV
Sbjct:   99 MVSVCWAGDSLTKLIKTLKFFELAASNMLAITNLAICVNLALIVMSHRTLSRVRSASTPALILVFLALSLGVAAISVPFWTEMVVSGTAFWVQTHEQAAHDWIVVAGFFVEFFVGICMLVIVVWLVIFRRTEIKQSWKMHARIRYYFGLTLIATGVNLALGICGTIYV 266          
BLAST of mRNA_S-dermatodea_contig13054.1841.1 vs. uniprot
Match: D7FTK5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK5_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 1.270e-37
Identity = 86/226 (38.05%), Postives = 132/226 (58.41%), Query Frame = 0
Query:    1 MVLNCWLKDGALGVIKALKFFELVGSNTLALTNLAICVNLAVIVHSHRTFSRVRGASSPRLMVMFVLVSAVVAAVSVPFGDIWVATGLSVYQNGKSPGRQRVLVISYFLVEAICSVVMIVIVALLLLFRRPELRQVWKLHRRIKTHFALTMIAITANVAI-TAGGIFYVKNGSPIWLVIGSWILRDIHIALDTLVLYTALGVSSFDLELEPRHGPSR--NVSCIES 223
            MV  CW +   +G IKA+KF E V SN +A+T+LAICVNLA+IV SHRT +RV+  SSP L+ + + +S  + +V+VP  +     G   +      G    +V+S F +E +  + M VI+A LLLFR  E+++ W++  RI+ +F LT++    N+ I     +F + +     L I SW+ R IH+ALDT VLY  L     + +++ R G +R  N +C +S
Sbjct:   73 MVTVCWTESDLIGFIKAVKFIEFVSSNMMAITHLAICVNLALIVSSHRTLTRVQSVSSPWLLSLLLAISIGITSVTVPLWETVYVIGTGFWIVNSDQGSYDAVVVSIFFLEFMVGICMFVILAWLLLFRMKEVKECWRIDARIRYYFCLTLLGTAVNIGIGICSTVFVIGDMDEPRLAIWSWVSRYIHVALDTFVLYGVLR----EKDMDERGGNARSSNYNCNDS 294          
BLAST of mRNA_S-dermatodea_contig13054.1841.1 vs. uniprot
Match: A0A6H5JWL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWL8_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 1.670e-37
Identity = 84/214 (39.25%), Postives = 123/214 (57.48%), Query Frame = 0
Query:    1 MVLNCWLKDGALGVIKALKFFELVGSNTLALTNLAICVNLAVIVHSHRTFSRVRGASSPRLMVMFVLVSAVVAAVSVPFGDIWVATGLSVYQNGKSPGRQRVLVISYFLVEAICSVVMIVIVALLLLFRRPELRQVWKLHRRIKTHFALTMIAITANVAITAGGIFYV----KNGSP-IWLVIGSWILRDIHIALDTLVLYTALGVSSFDLELE 209
            MV  C+     +G+IK + F  +  SN LA TNL IC+NLA+IV SHRT +RV+  SSPR++ + +LVSA +AA +VP  +  V  G   +     P +   +++S +++E +  + M+VIV  L +FR  E+++ W+ H RI+ +F LT+     N+ +   G  YV    K   P IW    SW+ R IHI+ DTLVLY AL   S D   E
Sbjct:   23 MVSACYAATNLVGLIKTINFVMMTSSNMLAATNLGICINLALIVSSHRTMTRVKTVSSPRVLFIMLLVSASLAAATVPLWETTVVLGTHFWFTNSDPVKNDFIIMSIYIIEFLVGICMLVIVFWLAMFRMTEIKECWRFHSRIRYYFCLTLFGTAVNLGLGICGAAYVFGDRKEPLPQIW----SWLFRYIHISFDTLVLYGALREGSIDERAE 232          
BLAST of mRNA_S-dermatodea_contig13054.1841.1 vs. uniprot
Match: D8LNN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN2_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 1.110e-36
Identity = 69/168 (41.07%), Postives = 109/168 (64.88%), Query Frame = 0
Query:    1 MVLNCWLKDGALGVIKALKFFELVGSNTLALTNLAICVNLAVIVHSHRTFSRVRGASSPRLMVMFVLVSAVVAAVSVPFGDIWVATGLSVYQNGKSPGRQRVLVISYFLVEAICSVVMIVIVALLLLFRRPELRQVWKLHRRIKTHFALTMIAITANVAITAGGIFYV 168
            M+  CW+ +   G IKALK+ E   SN LA+TNLAIC+NLA++V+SHRT SRV+  S+P L+++F+ +S + AA SVPF  I V +G + +       +   +++S  ++E +  + M VIV+ L+ FR   +++ WK+H RI+ +F LT+IA   N+A+   G+ YV
Sbjct:    1 MISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVKSVSTPALVLLFLAISVIAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFVIVSWLMAFRMQAIKECWKIHARIRYYFVLTLIATAVNLALGISGLSYV 168          
BLAST of mRNA_S-dermatodea_contig13054.1841.1 vs. uniprot
Match: D7FTK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK4_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 3.600e-36
Identity = 87/233 (37.34%), Postives = 125/233 (53.65%), Query Frame = 0
Query:    1 MVLNCWLKDGALGVIKALKFFELVGSNTLALTNLAICVNLAVIVHSHRTFSRVRGASSPRLMVMFVLVSAVVAAVSVPFGDIWVATGLSVYQNGKSPGRQRVLVISYFLVEAICSVVMIVIVALLLLFRRPELRQVWKLHRRIKTHFALTMIAITANVAITAGGIFYVKNG-SPIWLVIGSWILRDIHIALDTLVLYTALGVSSFDLELEPRHGPSRNVSCIESYAPPTKRSG 232
            MV  CW       +IK +KF EL  S+ LALT+LAICVNLA+IV SHRT  RV+  SSP L+ + + +S  + A +VP  +  +  G S +      G+   +V+S F +E I  + M VIVA LLLFR  E+++ W++H RI+ +  LT++    +++I      +V  G     L I +W+ R IHIALDT VLY  L     D  +        N +      PP+   G
Sbjct:   24 MVTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDAVVVSIFFLEFIVGLCMFVIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQTRLAIWAWVFRYIHIALDTFVLYGVLREKDMDERVGNARPSDINSNSTVGVPPPSTLHG 256          
BLAST of mRNA_S-dermatodea_contig13054.1841.1 vs. uniprot
Match: A0A6H5KRY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRY2_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 5.180e-29
Identity = 74/170 (43.53%), Postives = 104/170 (61.18%), Query Frame = 0
Query:    1 MVLNCWLKDGALGVIKALKFFELVGSNTLALTNLAICVNLAVIVHSHRTFSRVRGASSPRLMVMFVLVSAVVAAVSVPFGDIWVATGLSVYQNGKSPGRQRV--LVISYFLVEAICSVVMIVIVALLLLFRRPELRQVWKLHRRIKTHFALTMIAITANVAITAGGIFYV 168
            M+  CW       +IK LKF EL  +N LA+TNLAICVNLA++V SHRT SRV   SSPR++ + ++++   AA +VP     + TG   Y +  S  +Q +   V+S FL E I  + MI IVA LLLFR  E+++ WK+H RI+ +F LT+IA   N+ +   G  Y+
Sbjct:    1 MISVCWAGGNLSNLIKFLKFLELASANMLAVTNLAICVNLALVVMSHRTLSRVSSLSSPRVIWLSLVLAVGGAAAAVPSWKTIILTGT--YFSPYSEDKQDLDWSVVSRFLFEFIVGICMIAIVAWLLLFRMKEIKECWKVHTRIRYYFGLTLIATGVNLVLGIFGTVYI 168          
BLAST of mRNA_S-dermatodea_contig13054.1841.1 vs. uniprot
Match: D8LNM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM5_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 5.160e-25
Identity = 64/168 (38.10%), Postives = 96/168 (57.14%), Query Frame = 0
Query:    1 MVLNCWLKDGALGVIKALKFFELVGSNTLALTNLAICVNLAVIVHSHRTFSR-VRGASSPRLMVMFVLVSAVVAAVSVPFGDIWVATGLSVYQNGKSPGRQRVLVISYFLVEAICSVVMIVIVALLLLFRRPELRQVWKLHRRIKTHFALTMIAITANVAITAGGIFY 167
            M+  CW     + +IK  KF EL   N LA+TNLAIC+NLA++V SH      V   SSP L+V+ +++S   AA + PF +  + +G   +   ++      + IS F +E    + M VIVA LLLFR  E+++ WK+H RI+ +F LT+IA   N+ +   G+ Y
Sbjct:    5 MISVCWTGANLIKLIKTFKFLELASVNMLAMTNLAICMNLALVVMSHGDQQPGVNSLSSPLLIVVSLVISIGAAAAAAPFWEFIILSGTGFFPETENQRGSDWITISRFYLEFFVGICMFVIVAWLLLFRMTEIKECWKMHARIRYYFGLTLIATGVNLILGICGVIY 172          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13054.1841.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LNN1_ECTSI4.980e-4442.98Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K8K6_9PHAE1.820e-4337.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNP0_ECTSI5.470e-3839.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LNM4_ECTSI9.460e-3848.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTK5_ECTSI1.270e-3738.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWL8_9PHAE1.670e-3739.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNN2_ECTSI1.110e-3641.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTK4_ECTSI3.600e-3637.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRY2_9PHAE5.180e-2943.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNM5_ECTSI5.160e-2538.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 207..258
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 85..103
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 128..146
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 147..168
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 169..187
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..84
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..42
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 43..62
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 188..206
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..127
NoneNo IPR availableTMHMMTMhelixcoord: 105..127
NoneNo IPR availableTMHMMTMhelixcoord: 146..168
NoneNo IPR availableTMHMMTMhelixcoord: 63..85
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13054contigS-dermatodea_contig13054:1013..5125 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13054.1841.1mRNA_S-dermatodea_contig13054.1841.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig13054 971..6454 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig13054.1841.1 ID=prot_S-dermatodea_contig13054.1841.1|Name=mRNA_S-dermatodea_contig13054.1841.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=259bp
MVLNCWLKDGALGVIKALKFFELVGSNTLALTNLAICVNLAVIVHSHRTF
SRVRGASSPRLMVMFVLVSAVVAAVSVPFGDIWVATGLSVYQNGKSPGRQ
RVLVISYFLVEAICSVVMIVIVALLLLFRRPELRQVWKLHRRIKTHFALT
MIAITANVAITAGGIFYVKNGSPIWLVIGSWILRDIHIALDTLVLYTALG
VSSFDLELEPRHGPSRNVSCIESYAPPTKRSGVSSESVIGRVPCFSGVRP
QHQQVQHF*
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