mRNA_S-dermatodea_contig13022.1829.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig13022.1829.1
Unique NamemRNA_S-dermatodea_contig13022.1829.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig13022.1829.1 vs. uniprot
Match: A0A6H5J5U8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5U8_9PHAE)

HSP 1 Score: 251 bits (640), Expect = 1.850e-75
Identity = 126/163 (77.30%), Postives = 150/163 (92.02%), Query Frame = 2 
Query:    5 ALIGHFTLATGFAVAGERMTRTLRLMAFKAMIRHDIAWFDKEESAVGILTTRLESEASLVRKATGTNLAHSTQLFMTLVLGTIIGLAFSWQIGLLAMAMIPMIAFAGIVQMSMMTGGYGDGEGLDGGNSAASLLSSSLQGMTTVTAFNMQDRLATEYRDASEV 493
            AL+G+F L+TGFAVAGERMTRTLR MAF+AM+RHDI+WFDKE SAVGILT+RLESEAS+VR++TG+N+AHSTQL MTL +GT+IGL F+WQIGLLAMAMIP+IA AG+VQM+M+TGGYGD +GLDGG  AA LLSSSLQGMTTVTAFNMQ++LA +Y+ ASEV
Sbjct:  663 ALVGNFVLSTGFAVAGERMTRTLRKMAFEAMVRHDISWFDKESSAVGILTSRLESEASMVRRSTGSNVAHSTQLMMTLTIGTVIGLVFAWQIGLLAMAMIPLIAAAGVVQMAMLTGGYGDNDGLDGGGGAAGLLSSSLQGMTTVTAFNMQEKLAQDYKQASEV 825
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BLAST of mRNA_S-dermatodea_contig13022.1829.1 vs. uniprot
Match: D7FHL1_ECTSI (ATP-binding cassette, sub-family B (MDR/TAP), member 1A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL1_ECTSI)

HSP 1 Score: 238 bits (608), Expect = 7.990e-70
Identity = 120/161 (74.53%), Postives = 144/161 (89.44%), Query Frame = 2 
Query:    8 LIGHFTLATGFAVAGERMTRTLRLMAFKAMIRHDIAWFDKEESAVGILTTRLESEASLVRKATGTNLAHSTQLFMTLVLGTIIGLAFSWQIGLLAMAMIPMIAFAGIVQMSMMTGGYGDGEGLDGGNSAASLLSSSLQGMTTVTAFNMQDRLATEYRDASE 490
            L+G+  L+TGF V+GER+TRTLR MAF+AM+RHDIAWFD+E SAVG+LTTRLE+EAS+VRKATG N+AH+TQL MTL +GT+IGLAF+WQIGLLA+A IP+IA AGIVQM+MMTGGYGD +GLDGG  AA LLSS+LQGM+TV AFNMQ+RLA EY+ ASE
Sbjct:  770 LVGNMALSTGFTVSGERLTRTLRYMAFEAMVRHDIAWFDEESSAVGVLTTRLEAEASMVRKATGGNVAHATQLMMTLTVGTLIGLAFAWQIGLLAIATIPLIAVAGIVQMAMMTGGYGDNDGLDGGGKAAGLLSSALQGMSTVAAFNMQERLAAEYKQASE 930
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BLAST of mRNA_S-dermatodea_contig13022.1829.1 vs. uniprot
Match: D7FHL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL4_ECTSI)

HSP 1 Score: 199 bits (505), Expect = 6.330e-56
Identity = 99/131 (75.57%), Postives = 120/131 (91.60%), Query Frame = 2 
Query:   98 IRHDIAWFDKEESAVGILTTRLESEASLVRKATGTNLAHSTQLFMTLVLGTIIGLAFSWQIGLLAMAMIPMIAFAGIVQMSMMTGGYGDGEGLDGGNSAASLLSSSLQGMTTVTAFNMQDRLATEYRDASE 490
            +RHDI+WFDKE SAVGILT+RLESEAS+VR++TG+N+AHSTQL MTL +GT+IGL F+WQIGLLAMAMIP+IA AG+VQM+M+TGGYGD +GLDGG  AA LLSSSLQGMTTVTAFN+Q++LA +Y+ ASE
Sbjct:  712 VRHDISWFDKESSAVGILTSRLESEASMVRRSTGSNVAHSTQLIMTLTIGTVIGLVFAWQIGLLAMAMIPLIAAAGVVQMAMLTGGYGDNDGLDGGGGAAGLLSSSLQGMTTVTAFNLQEKLAQDYKQASE 842
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BLAST of mRNA_S-dermatodea_contig13022.1829.1 vs. uniprot
Match: A0A836CGZ9_9STRA (ATP-binding cassette, sub-family B, member 1A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGZ9_9STRA)

HSP 1 Score: 186 bits (471), Expect = 2.420e-51
Identity = 92/160 (57.50%), Postives = 120/160 (75.00%), Query Frame = 2 
Query:    5 ALIGHFTLATGFAVAGERMTRTLRLMAFKAMIRHDIAWFDKEESAVGILTTRLESEASLVRKATGTNLAHSTQLFMTLVLGTIIGLAFSWQIGLLAMAMIPMIAFAGIVQMSMMTGGYGDGEGLDGGNSAASLLSSSLQGMTTVTAFNMQDRLATEYRDA 484
            A +GH  LA GF+ +GERM R LR  AF A++RHDI WFD EE A G+LT RLE +A+ + +ATG  L H  QL MTL +G ++GLA +WQIGL+A+AM+P+I FAG+VQM+M++GGYGD EGLDGG+SA  +L  +L G+TTV AFNMQ  ++  Y DA
Sbjct:  698 ATVGHLMLAAGFSTSGERMVRRLRETAFAAIVRHDIGWFDFEEHATGVLTGRLEEDANAMARATGMALGHKVQLIMTLCVGIVVGLAAAWQIGLVAIAMVPLIGFAGVVQMAMLSGGYGDTEGLDGGSSAGVVLGGALNGITTVNAFNMQADMSARYHDA 857
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BLAST of mRNA_S-dermatodea_contig13022.1829.1 vs. uniprot
Match: D8LS12_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS12_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 1.140e-50
Identity = 94/160 (58.75%), Postives = 122/160 (76.25%), Query Frame = 2 
Query:    5 ALIGHFTLATGFAVAGERMTRTLRLMAFKAMIRHDIAWFDKEESAVGILTTRLESEASLVRKATGTNLAHSTQLFMTLVLGTIIGLAFSWQIGLLAMAMIPMIAFAGIVQMSMMTGGYGDGEGLDGGNSAASLLSSSLQGMTTVTAFNMQDRLATEYRDA 484
            A++GH  +A GF+VAGER+TR LR + F+A++RHDI WFDKEE+AVG LTT+LE + + V+ ATGTN+A+ TQL +TL+LG +IGLA +WQIGLLA+A+IP++A A IVQM MM G YGD   LDGG  A  +L  +L G+TTV AFNMQD  +  Y  A
Sbjct:  787 AIVGHCAMAYGFSVAGERLTRRLREIGFRAILRHDIGWFDKEENAVGALTTQLEEDTAKVQFATGTNVANKTQLVVTLLLGVVIGLASAWQIGLLALALIPLMATAAIVQMQMMNGSYGDTSELDGGAQAGVILGGALNGVTTVAAFNMQDSTSANYEKA 946
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BLAST of mRNA_S-dermatodea_contig13022.1829.1 vs. uniprot
Match: A0A835Z4J1_9STRA (ATP-binding cassette, sub-family B, member 1A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4J1_9STRA)

HSP 1 Score: 183 bits (464), Expect = 2.140e-50
Identity = 93/156 (59.62%), Postives = 117/156 (75.00%), Query Frame = 2 
Query:    8 LIGHFTLATGFAVAGERMTRTLRLMAFKAMIRHDIAWFDKEESAVGILTTRLESEASLVRKATGTNLAHSTQLFMTLVLGTIIGLAFSWQIGLLAMAMIPMIAFAGIVQMSMMTGGYGDGEGLDGGNSAASLLSSSLQGMTTVTAFNMQDRLATEY 475
            L+G+  L TGFA +GERMTR LR MAFKA+IRHD+ WFD EE +  +LTT LES+AS + KATG +L H  QL MTL+LG +IGL  +WQ+GL+AMA IP+I  + +VQM+M TGGYGD EGLDGG SA  +L S+L G+ TV AFNMQ  ++  Y
Sbjct:  843 LLGNLMLTTGFATSGERMTRRLRGMAFKAIIRHDVGWFDAEEHSTAVLTTNLESDASAMAKATGLDLGHKVQLVMTLLLGVLIGLVAAWQVGLVAMATIPLIGLSSVVQMAMFTGGYGDNEGLDGGVSAGVVLGSALNGIATVQAFNMQRAMSDRY 998
[Close]
BLAST of mRNA_S-dermatodea_contig13022.1829.1 vs. uniprot
Match: A0A836CDG9_9STRA (ATP-binding cassette, sub-family B, member 1A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDG9_9STRA)

HSP 1 Score: 179 bits (454), Expect = 4.690e-49
Identity = 92/160 (57.50%), Postives = 116/160 (72.50%), Query Frame = 2 
Query:    5 ALIGHFTLATGFAVAGERMTRTLRLMAFKAMIRHDIAWFDKEESAVGILTTRLESEASLVRKATGTNLAHSTQLFMTLVLGTIIGLAFSWQIGLLAMAMIPMIAFAGIVQMSMMTGGYGDGEGLDGGNSAASLLSSSLQGMTTVTAFNMQDRLATEYRDA 484
            A  GH  LA GFA +GERM R LR  AF A++RHDI WFD +E++ G LTTRLE +A+ V +ATG  L H  QL MTLV+G  +GLA  WQIGL+A+AM+P+I  AG+VQM+M TGGYGD EGLDGG+SA  +L  +L G+TTV AF+MQ  +   Y +A
Sbjct:  705 AFCGHIALAWGFATSGERMVRRLRESAFTAIVRHDIGWFDFDENSTGALTTRLEEDANAVSRATGMALGHKVQLVMTLVVGIGVGLAVCWQIGLVAIAMVPLIGAAGVVQMAMFTGGYGDNEGLDGGSSAGVILGGALNGITTVHAFSMQGAMCDRYHEA 864
[Close]
BLAST of mRNA_S-dermatodea_contig13022.1829.1 vs. uniprot
Match: A0A6H5L6B5_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B5_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 8.480e-35
Identity = 77/160 (48.12%), Postives = 99/160 (61.88%), Query Frame = 2 
Query:    5 ALIGHFTLATGFAVAGERMTRTLRLMAFKAMIRHDIAWFDKEESAVGILTTRLESEASLVRKATGTNLAHSTQLFMTLVLGTIIGLAFSWQIGLLAMAMIPMIAFAGIVQMSMMTGGYGDGEGLDGGNSAASLLSSSLQGMTTVTAFNMQDRLATEYRDA 484
            A++GH T+A GF+VAGER+TR LR + F+A++RHDI WFDKEE+AVG LTT+LE + +                                +IGLLA+A+IPM+A A IVQM MM G YGD +GLDGG  A  +L  +L G+TTV AFNMQD  +  Y  A
Sbjct:  472 AIVGHCTMAYGFSVAGERLTRRLREIGFRAILRHDIGWFDKEENAVGALTTQLEEDTA--------------------------------KIGLLALALIPMMATAAIVQMQMMNGSYGDTDGLDGGAQAGVILGGALNGVTTVAAFNMQDSTSANYEKA 599
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BLAST of mRNA_S-dermatodea_contig13022.1829.1 vs. uniprot
Match: A0A836CNL1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNL1_9STRA)

HSP 1 Score: 138 bits (348), Expect = 8.650e-35
Identity = 80/185 (43.24%), Postives = 114/185 (61.62%), Query Frame = 2 
Query:    8 LIGHFTLATGFAVAGERMTRTLRLMAFKAMIRHDIAWFDKEESAVGILTTRLESEASLVRKATGTNLAHSTQLFMTLVLGTIIGLAFSWQIGLLAMAMIPMIA-----------FAGIVQMS-------------MMTGGYGDGEGLDGGNSAASLLSSSLQGMTTVTAFNMQDRLATEYRDASE 490
            ++GH   A GFAV+GER+TR +R MAFKA++RHDI WFD  E AVG+LTT LE++AS + +ATG ++ H  QL  T+ LG    L  SWQ+GL+A+ ++PM+            FAG+V+ +             M TGGYG   G DG   A ++L ++L  ++TV AFN+Q +L+  Y +A E
Sbjct:  999 VVGHVIEALGFAVSGERLTRRMREMAFKAILRHDIGWFDNAEHAVGVLTTSLEADASAMARATGMDVGHKVQLLATIGLGVGXXLGASWQVGLVALLVLPMVXXXXXXXXXXXXFAGVVRQAIFIGGNGQRSAGAMFTGGYGTEVGTDGVR-AGTILGNALNAVSTVQAFNLQGQLSDRYNEAVE 1182
[Close]
BLAST of mRNA_S-dermatodea_contig13022.1829.1 vs. uniprot
Match: A0A8C4WSZ7_9SAUR (ATP binding cassette subfamily B member 1 n=1 Tax=Gopherus evgoodei TaxID=1825980 RepID=A0A8C4WSZ7_9SAUR)

HSP 1 Score: 105 bits (262), Expect = 3.060e-23
Identity = 57/116 (49.14%), Postives = 75/116 (64.66%), Query Frame = 2 
Query:    5 ALIGHFTLATGFAVAGERMTRTLRLMAFKAMIRHDIAWFDKEESAVGILTTRLESEASLVRKATGTNLAHSTQLFMTLVLGTIIGLAFSWQIGLLAMAMIPMIAFAGIVQMSMMTG 352
            +L+  F     F  AGE +T  LR MAFK+M+R DI WFD  ++  G LTTRL ++AS V+ ATGT LA  TQ    L  G II L + WQ+ LL +A++P+IA AGI+QM M+ G
Sbjct:  716 SLVTFFLQGFTFGKAGEILTMRLRFMAFKSMLRQDIGWFDDPKNNTGALTTRLANDASQVKGATGTRLALITQNIANLGTGIIISLVYGWQLTLLILAVVPVIAIAGIIQMKMLAG 831
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13022.1829.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J5U8_9PHAE1.850e-7577.30ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FHL1_ECTSI7.990e-7074.53ATP-binding cassette, sub-family B (MDR/TAP), memb... [more]
D7FHL4_ECTSI6.330e-5675.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CGZ9_9STRA2.420e-5157.50ATP-binding cassette, sub-family B, member 1A n=1 ... [more]
D8LS12_ECTSI1.140e-5058.75Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835Z4J1_9STRA2.140e-5059.62ATP-binding cassette, sub-family B, member 1A n=2 ... [more]
A0A836CDG9_9STRA4.690e-4957.50ATP-binding cassette, sub-family B, member 1A n=1 ... [more]
A0A6H5L6B5_9PHAE8.480e-3548.13ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A836CNL1_9STRA8.650e-3543.24P-loop containing nucleoside triphosphate hydrolas... [more]
A0A8C4WSZ7_9SAUR3.060e-2349.14ATP binding cassette subfamily B member 1 n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13022contigS-dermatodea_contig13022:694..6767 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorymitochondrion
Exons5
Model size505
Cds size504
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13022.1829.1prot_S-dermatodea_contig13022.1829.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig13022 694..6767 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924271.3887203-CDS-S-dermatodea_contig13022:693..8271622924271.3887203-CDS-S-dermatodea_contig13022:693..827Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13022 694..827 -
1694079140.5251088-CDS-S-dermatodea_contig13022:693..8271694079140.5251088-CDS-S-dermatodea_contig13022:693..827Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13022 694..827 -
1622924271.3992293-CDS-S-dermatodea_contig13022:2195..22841622924271.3992293-CDS-S-dermatodea_contig13022:2195..2284Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13022 2196..2284 -
1694079140.5329547-CDS-S-dermatodea_contig13022:2195..22841694079140.5329547-CDS-S-dermatodea_contig13022:2195..2284Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13022 2196..2284 -
1622924271.4128525-CDS-S-dermatodea_contig13022:3977..40771622924271.4128525-CDS-S-dermatodea_contig13022:3977..4077Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13022 3978..4077 -
1694079140.5408125-CDS-S-dermatodea_contig13022:3977..40771694079140.5408125-CDS-S-dermatodea_contig13022:3977..4077Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13022 3978..4077 -
1622924271.4231038-CDS-S-dermatodea_contig13022:5817..59011622924271.4231038-CDS-S-dermatodea_contig13022:5817..5901Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13022 5818..5901 -
1694079140.548221-CDS-S-dermatodea_contig13022:5817..59011694079140.548221-CDS-S-dermatodea_contig13022:5817..5901Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13022 5818..5901 -
1622924271.4346268-CDS-S-dermatodea_contig13022:6670..67671622924271.4346268-CDS-S-dermatodea_contig13022:6670..6767Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13022 6671..6767 -
1694079140.5558863-CDS-S-dermatodea_contig13022:6670..67671694079140.5558863-CDS-S-dermatodea_contig13022:6670..6767Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13022 6671..6767 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig13022.1829.1

>prot_S-dermatodea_contig13022.1829.1 ID=prot_S-dermatodea_contig13022.1829.1|Name=mRNA_S-dermatodea_contig13022.1829.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=168bp
LRPHRALYSRHRLRRRGRANDEDAAAYGLQGHDSSRHRVVRQGGVGRGHP
YDPAGVGGVLGAQGDGHQSRALDPALHDPRARHHHRPRLLVANRTVGDGD
DPNDRVRRDRADVYDDGRLRRRGGPGRRQQRGQLAELLAPRHDHRDRVQH
AGQARHRVPRRFGGGHA*
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mRNA from alignment at S-dermatodea_contig13022:694..6767-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig13022.1829.1 ID=mRNA_S-dermatodea_contig13022.1829.1|Name=mRNA_S-dermatodea_contig13022.1829.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6074bp|location=Sequence derived from alignment at S-dermatodea_contig13022:694..6767- (Saccorhiza dermatodea SderLu1190fm monoicous)
CTGCGCCCTCATCGGGCACTTTACTCTCGCCACCGGCTTCGCCGTCGCGG
GAGAGCGAATGACGAGGACGCTGCGGCTTATGGCCTTCAAGGCCATGGTG
AGTTGGGAATAATCGATTTCATCGTGGGCCTGGGGGGGGCGATGCTTCCC
ATGCTTGCCTCTCTCGCCGACGTGGTTTGCAAACGACAGACGTTGACGAT
ATCGTGGCTTTTTGGAGAGCTATATCCTCTTTACGTTCAAGCAAACGTCA
GCTCAATGGCCTCTGTTTCTTCGGACTCCAGCGCTCTTCCGGCCGGCGCC
GTTTGATCTGGAGCTCCGGCCTCTGCTTCGGCTCAACTCATGTTTAGCAT
GCCTTAGCTGTTAGACCATTGACCGCGCGTCCTCGAGAGGACGGAGGGAG
CATTGTTCCCACAGGATCGATCTATCGCCCTTGGCCAATCGTTCCTTCCT
ACTTTTCCAAAGGTGGCGCAAAAATATATATATCCTATCTTGTCTACACC
ACTACCACTTCTCGCCTTCTCAGGCCACTTATTATCCCCCAGTATAGCTA
CCGCCTTCGTCTTGGCTGCCTGGGGGGGGGGGGCTGGTGGCTCACAAAGC
TTATCAAAGTTACATACGCTATGATACCAGGATATCGTTCAGGACTAAGA
CACTTGGTGTATAATGGCATTTTCGTGTAGGATCATAGTCGTGCATGGCG
TGAAACCATGGCATCGTACGTACAACGTATAAAACCTCCGTATGTGTGTA
TAATATTAACATTAATAGCTTGATTGAACCATCTTTCCTTGTTTGAAAAA
AATTGTCGTCGGTGCCGGTTCGCGTTTGGTTTGTTCCCCTTCGGCGCGAA
ACGCCGACCCTTACAGATTCGTCACGACATCGCGTGGTTCGACAAGGAGG
AGTCGGCCGTGGGCATCCTTACGACCCGGCTGGAGTCGGAGGCGTCCTTG
GTAAGTCGATTCTATTATCGTGCATTCGATTCTAAGAAAAACACTCTACG
AAATATTTGTATTTGTATTATACTAGCCAGTATTATAGGTAGCCATGGCT
AACGCCCGTGAGGTGAAAAATCCTACTTTTTCGCTCAACACAAACACCAA
GTTCTTTTGCATCACTTTGTCCTGTAGGATTCCGGCCTCACAAAAACCGT
TCTCTAAAAATCGCTATTATCTTAAAGATCGGCCAAGGCCAAGGCGCTTT
TAATCTTTTAATTAATAAAGGACAATGAGAAGAAGAAGAAGAAAACGCGC
ACACGCACCCACAACAAACAAAATGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTTTTTTTGTGTCGTCCGTTTTTTTTTTTTGCTAGTTAGA
CGAAAAATGCACAAATAGGTGTATGTTCAGCCCCTTCCTGTATAGTAGAG
AGGCGCGGTTTTGTGCTTTTCTACATAAATGGCCGAAGTTCTGAAGTAAT
ATCCCCTCTGTTTCCGAGAGTTTGTGTCAATTCCTTCTTATTGTGTACCT
AAGGTAATATGGATAATTCCTTAGTTTTTTTTTCCGATCTCTCTATTTCT
CACATCTGCCCACGAGCGGCAGCGGCAACCATAAGTGGGCCGGCTGGTTG
TAATGGTGATACGCAATCAATCAATAAATCAATCAGTCAAGTCAAATAAA
TCAACGATTTTGTGTTGTGTGTGTATGTGCAGGCGCACGCGCACGACGTT
GTTTTTCTGACGCACAGGTGGCGGGAGTATGTATGTATGTGCTCCCCAAC
TCGTGGGGAAGTGTCGTGCTTCGGCTGGGGGTTTGGACTTTTTTGTGTTG
GACGCGTCAATCAGAGTCAGCGGGCCCGAGTTAAGAACACTGCCGAAACG
TAGAAGCGTTTTCCACACAGTTGACGCTGCCCCCCCCCCCCCCCCCCCCC
CCCGCCACACCACGACGGAATGGACCCACCCGTGGGCACCCACAGCCCAA
ACGCCCCCCCCCGCCCCGCCCACCAACCCCCACCCCCCCCCCCCCCGCTT
CCGCTCTTGTCTCTGCCACACCCNNNNNNNNNNGCGTCGCAAACGCAAGG
ATGATGGCTAGCAGCTGGTATCATCCTTGTGAAACGCAGCCTGGCCGGCG
GAAACCCGGCATACCCCTCCGTCCCGGCGTTGTTGGGACGCGTGGTCTGT
GTCCGTCTGGACATGATATTTCATGCGTTTAACATAAGCACACAGCCCCC
CCCCACACACACACTCTCGATAGAGATGCACCGGCCTGATCGATTGCTGT
GGGGGAGTAAACTCGCTTTGAAAACCGTACAAAAACATACAGTGTAGTTA
TTATAGTAGAGGTCGATGATGATCGAGAGACAGAGTTGTTATGATCGTCG
AAAAGTGTGAATGCAATGCAAACACAATCTCTCCCGTTTTCGCAAAAAAT
CGCCTGTCGAAAAACCAACACAAAGGACTCGTGGAAGACAAAATAAGTAA
ATGATGGAAGTCGAAAAAATCGGGTGCATGCATGACAGCATGCACGCATG
CATAGCATTTTGAGGGTTTGTGCATGCATGTAAAGCCTCTTAAACCTGAC
ATGAAAAAATGTCCAAGACAAAATCGATGTTTTTGTCAATTTCAGACAAC
AAATCAAAAACCAAGAAAAAAAACAAAATTCAAAGCTTAAAAAAAATCGC
GAAAAAAGGATCGATTTGACCCTCCCTCCTCCTCTTGCAGGTGCGCAAGG
CGACGGGCACCAATCTCGCGCACTCGACCCAGCTCTTCATGACCCTCGTG
CTCGGCACCATCATCGGCCTCGCCTTCTCGTGGCAAATCGGTAAGACACC
TATGCATCTATCTTTCTCGTCTTAACTGATCTGATGGATCACCGGCTTAA
CCCTTTTGAGACTTTGGCTGTTTTCGGGTAACTGTTTGCTGCTATTGTTC
TATATCCTTTTGGGACTAAGCCTGGGGAATAAGCCTGTTTTCGGGTAACT
GTTGGCTACTATAACAGCAAACAGTTACCCGATTACAGCCTTAGTCCCAA
AACAAAGAGGATATTATAATAATAGCAAACTGTTACCCGAAAACAGCCTC
AGTCCCATCCCAAAAGGGTTAAAACCCTTTTCGAACTTGAGTCTGTCTTA
GGGGCCAACCTTGCCCGCACCTTGGGTCGCGTCGAACGCCCACTCGACCA
CTGCTGTTCTTCGCCCTTGTATCGTAAGAGCGTCGGTACAGCATTATAGA
AAAGTCGGCCAGCCTCGTGCCACGCTTTGTTACTGTTACTGTGATGGTCT
CATACAGTACATAGTATTGGTGTTACGTTGATGATGATCACGATTTTACT
TCGATGATGTTAATGGTCTTACGTCGATGATGATGATGTCTTACGTTGGT
GATAATGCTGGGTTTACGTTGATGGTAATCTATGTGTCTTGCGTCGATGG
TGATTTTACATGGCTCAACGCTGGTGTTGGGACTGTGCATTTTTGTTACT
ATTCTCACCGAGGACCACAGTTAACAGGTCCAAATTCGTCACAAACTGTT
AACCCTTTTGGGACTAAGGCGGTTATCGGGTAACTGTTTGCTATTGTTAC
TCACCCTTTTGGGACTAAGGCTGGGGACGAAGCCTGTTTTCGGGTAACCG
TTGGCTACCATAATAGCAAACAGTTACCATAAAACAGCTTTAGTCCCAAA
ACAAAAAGGGTATATAATAATAACAAACAGTTACCCGAAAACAGCTTGAG
TCCCAAAAGGGTTAAGCTTTTAGCAAAAACAATAAAAAGCCCGGAACGAT
TGGGTCCATTTCACGGCCGGGTGTTGTGTCGTGTAGGCCAGCCAGGCCAG
GCCTTTTGTGCTGTTTTGTGTTACACGAGTTTTTGGTGCTGTTTGGGTGT
TCAAATTCGCACGAAATTCGCACGAATCGAATCGCGTATATATTGTCGTG
ATACGATAGTTGCTCCTGATACTGTCTACCTCCGCCAAATAGCTCGCATT
GCACGGTGCGGTGCGGTGTGGTGGGGTGCGCTCGTGCGTGGAAGCCGTCA
CCGCACTCACTACTCGTGGCGACGACATTCGGCTCGAGGGGGTTCCACTG
GGGTTTACCCTCCTAACCCATAGGGGACTGGACTGGCTGACGCGTGCTTG
TTTTCGGGAGTAGGACGTCTACCTTGCAAGTACCCGTTTGTTTGCCGGGG
GGGGCGTGCGGGGGGGGGGAGGGGGGTTCTCGTCGCCTTGCAAGCATCGT
ATTAATAATAATAATAATGGTGGCCGTGTACAATTTATGACAATCCTGCC
ACGCTAAGGTATAGCATGCACGCTGCTTTCTTGCTCGTGCAAGCGCACGA
AAGAGCTTGGGAGTGATCCAATATGTTGTGTTTTTTCCCCCGACCGTGCC
AAGACTATTATAACAATAGAAAGCGTTTCGTTCTTTGGGAAGGTTCTCCG
GAATCTGGGATCGTTCCGGAGAACTGGTCCCTGCATACTATATGTGTTTA
ACACGGTGTATGTGTGTGTGTGTGCTGCTGCAGGACTGTTGGCGATGGCG
ATGATCCCAATGATCGCGTTCGCCGGGATCGTGCAGATGTCTATGATGAC
GGGCGGCTACGGCGACGGGGAGGTGAGGTGGTGATGGCAGTTACCTTGGT
GATGGCAGTTACCCTGGTGATGGTAAACGATGATGATGGTGGGTGATGAC
TGATGGGTGATGCATGGTGTTGTTGAGGACGATTGCTTGATTTATTGAGT
GATTGGAAGGTACCTTGGTGATGGCAGTTACCCTGGCGATGGTAGTTACC
CTGGTGATGGTAGTTACCTTGGTGATGGCAGTTACCCTGGTGATAGCAGT
TACCCTGGTGATGGTAGACGATGATGATGGTGGGTGATGACTGATGGGTG
ATGCATGGTGTTGTTGAGGACGATTGATTGAATGATTGATTGATTGATTG
ACAGTTACCCTGGTGATGGCAGTTTCCCTGATGATGATGAGTGATGACGA
TGGTGATGCATGGTGTTGTTGAGGATGATTGATTGGTTGATTGGCAGTCA
CCCTGGTGATGGTAGGCGATGATGATGGTGATGTATGGTGTCTTTGTGGA
GGACGATTGATCGATCGATTGACTAATAGATTATCACACTTACAACCAAC
CGGCCCACCAATGGTTACCAACCCCACTCTTGCAGTGATCAGATGAGAAA
GAAATCGAGAGACCTACAAAATATCCGCGGACTTAAGGCTACAGTACCTA
TCTATCATCTAGTGTACATAAGAAGAATATACAATATAATATATTGGCAT
AAGCTAACTCTCAGAAACAGAGGGGACATGCCTCCGAACTTGGGCCTGCT
AAAAGAAAGAAAATAGACACAACGGCCCCCTCTCATAGAAACAGTTTGGG
CTCATCGCACCCACGATGCCCTAGTCGAGTCTGGCAAGATGACGATGGTG
ATTGTCAGATTTTGCGATGGCGGTGATGGCCGTGGTGATGGAGGCGGTGA
TGGTGAATGGTTTTTTTATGGTGATGATGACGATGACATTGGATGTCGCC
ACAGGTATGTACTCCAAACAAGTGGATATACTTCAAACGAGTCAAGTATA
TGTGTGCTCGACATGCGCCGCGGTGGTGGCAGGTATTGATGTGATGCTCA
AAATATGAGTGATATCGTGGCTCTGATGATCATGATGGAATATGGCGATT
ATCATCATGATGATCATGATGATGGTCTCGCATGATCTCTGCCGCAATAA
TTGGACTCCTGGTGCATGTCAGAGACTTGTGGCTGCAGAGAGGTTGCCCA
TACGATTCCAAAGACAGCCTGCATGCCGCACAATTATGTCGCCATCGCAG
CTGTGGATACACTCCAAACAAGTGGATATACTGCACCTGAGAACTCCTAA
TGTCGGCCGGCGCCCGAGGTTGATAGAGCTCGCCTTGCTTACTTATGCTA
CCCTCGGGCAACCTTCGTGATTCATTCCCCGCGCTCGCAGGGCCTGGACG
GAGGCAACAGCGCGGCCAGCTTGCTGAGCTCCTCGCTCCAAGGCATGACC
ACCGTGACCGCGTTCAACATGCAGGACAGGCTCGCCACCGAGTACCGCGA
CGCTTCGGAGGTGGGCACGCTTGA
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Coding sequence (CDS) from alignment at S-dermatodea_contig13022:694..6767-

>mRNA_S-dermatodea_contig13022.1829.1 ID=mRNA_S-dermatodea_contig13022.1829.1|Name=mRNA_S-dermatodea_contig13022.1829.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1008bp|location=Sequence derived from alignment at S-dermatodea_contig13022:694..6767- (Saccorhiza dermatodea SderLu1190fm monoicous)
CTGCGCCCTCATCGGGCACTTTACTCTCGCCACCGGCTTCGCCGTCGCGG
GAGAGCGAATGACGAGGACGCTGCGGCTTATGGCCTTCAAGGCCATGCTG
CGCCCTCATCGGGCACTTTACTCTCGCCACCGGCTTCGCCGTCGCGGGAG
AGCGAATGACGAGGACGCTGCGGCTTATGGCCTTCAAGGCCATGATTCGT
CACGACATCGCGTGGTTCGACAAGGAGGAGTCGGCCGTGGGCATCCTTAC
GACCCGGCTGGAGTCGGAGGCGTCCTTGATTCGTCACGACATCGCGTGGT
TCGACAAGGAGGAGTCGGCCGTGGGCATCCTTACGACCCGGCTGGAGTCG
GAGGCGTCCTTGGTGCGCAAGGCGACGGGCACCAATCTCGCGCACTCGAC
CCAGCTCTTCATGACCCTCGTGCTCGGCACCATCATCGGCCTCGCCTTCT
CGTGGCAAATCGGTGCGCAAGGCGACGGGCACCAATCTCGCGCACTCGAC
CCAGCTCTTCATGACCCTCGTGCTCGGCACCATCATCGGCCTCGCCTTCT
CGTGGCAAATCGGACTGTTGGCGATGGCGATGATCCCAATGATCGCGTTC
GCCGGGATCGTGCAGATGTCTATGATGACGGGCGGCTACGGCGACGGGGA
GGACTGTTGGCGATGGCGATGATCCCAATGATCGCGTTCGCCGGGATCGT
GCAGATGTCTATGATGACGGGCGGCTACGGCGACGGGGAGGGCCTGGACG
GAGGCAACAGCGCGGCCAGCTTGCTGAGCTCCTCGCTCCAAGGCATGACC
ACCGTGACCGCGTTCAACATGCAGGACAGGCTCGCCACCGAGTACCGCGA
CGCTTCGGAGGTGGGCACGCTTGAGGCCTGGACGGAGGCAACAGCGCGGC
CAGCTTGCTGAGCTCCTCGCTCCAAGGCATGACCACCGTGACCGCGTTCA
ACATGCAGGACAGGCTCGCCACCGAGTACCGCGACGCTTCGGAGGTGGGC
ACGCTTGA
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