prot_S-dermatodea_contig13011.1826.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig13011.1826.1
Unique Nameprot_S-dermatodea_contig13011.1826.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length119
Homology
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BLAST of mRNA_S-dermatodea_contig13011.1826.1 vs. uniprot
Match: D8LCW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW4_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 6.800e-33
Identity = 73/102 (71.57%), Postives = 83/102 (81.37%), Query Frame = 0 
Query:   17 LEKESLQLMKQQLAAVHQLRLDIQRKESVIQARFRLRMAREGSLQLKVQEGQSAKDRAERLETHCHLLEERCLFLESTNGEYAERLGALDQESRARVDGLLR 118
            +EKESL +M+QQLAAVHQLR+D+QRK+SVIQ           SLQLKVQEG+SA+DR  RLE HCHLLE+RC  LESTNGEYAERLGALDQESR+RVD L R
Sbjct:    1 MEKESLDVMRQQLAAVHQLRIDLQRKDSVIQ-----------SLQLKVQEGESARDREGRLEAHCHLLEKRCSCLESTNGEYAERLGALDQESRSRVDSLRR 91
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13011.1826.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCW4_ECTSI6.800e-3371.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13011contigS-dermatodea_contig13011:1956..6844 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13011.1826.1mRNA_S-dermatodea_contig13011.1826.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig13011 1956..6844 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig13011.1826.1 ID=prot_S-dermatodea_contig13011.1826.1|Name=mRNA_S-dermatodea_contig13011.1826.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=119bp
MRVIKGRAARELEDLRLEKESLQLMKQQLAAVHQLRLDIQRKESVIQARF
RLRMAREGSLQLKVQEGQSAKDRAERLETHCHLLEERCLFLESTNGEYAE
RLGALDQESRARVDGLLR*
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