mRNA_S-dermatodea_contig12996.1815.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig12996.1815.1 vs. uniprot
Match: D7G6Y8_ECTSI (UBA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Y8_ECTSI) HSP 1 Score: 272 bits (696), Expect = 1.050e-81 Identity = 133/153 (86.93%), Postives = 145/153 (94.77%), Query Frame = 1
Query: 7 QLRSMVSDWSAGIAPSEDYKKYKRSQGKVDVKDLPRRVVGPSSTQLQLVRAMVRAIYDENSELRQSSGFLGKEDLKKEDVVLLKTYYEESFGFPYLLDLGGTIRATTDLGDLWYREYHLELTKEIQFPIEMSLPWIITEHIVKTKRAMALRSS 465
QLRSMVSDWS G+APSEDYKKYKR+QG+V+ K PRRVVGPSSTQLQLVRAMVRAIYDENSELRQSSG LG+EDLKKED+ LL+TYYE+SFGFPYLLDLGGTIR++TDLGDLWYREYHLELTKEIQFPIEMS PWIITEHIVKTKRAMA+ S+
Sbjct: 523 QLRSMVSDWSDGVAPSEDYKKYKRAQGRVEAKGAPRRVVGPSSTQLQLVRAMVRAIYDENSELRQSSGVLGREDLKKEDLGLLRTYYEQSFGFPYLLDLGGTIRSSTDLGDLWYREYHLELTKEIQFPIEMSFPWIITEHIVKTKRAMAIGSA 675
BLAST of mRNA_S-dermatodea_contig12996.1815.1 vs. uniprot
Match: A0A6H5KQX8_9PHAE (UBA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQX8_9PHAE) HSP 1 Score: 270 bits (691), Expect = 4.970e-81 Identity = 131/153 (85.62%), Postives = 145/153 (94.77%), Query Frame = 1
Query: 7 QLRSMVSDWSAGIAPSEDYKKYKRSQGKVDVKDLPRRVVGPSSTQLQLVRAMVRAIYDENSELRQSSGFLGKEDLKKEDVVLLKTYYEESFGFPYLLDLGGTIRATTDLGDLWYREYHLELTKEIQFPIEMSLPWIITEHIVKTKRAMALRSS 465
QLRSMVSDW+ G+APSEDYKKYKR+QG+V+ K PRRVVGPSSTQLQLVRAMVRAIYDENSELRQSSG LG+EDLK+ED+ LL+TYYE+SFGFPYLLDLGGTIR++TDLGDLWYREYHLELTKEIQFPIEMS PWIITEHIVKTKRAMA+ S+
Sbjct: 233 QLRSMVSDWTDGVAPSEDYKKYKRAQGRVEAKGAPRRVVGPSSTQLQLVRAMVRAIYDENSELRQSSGVLGREDLKREDLELLRTYYEQSFGFPYLLDLGGTIRSSTDLGDLWYREYHLELTKEIQFPIEMSFPWIITEHIVKTKRAMAIGSA 385
BLAST of mRNA_S-dermatodea_contig12996.1815.1 vs. uniprot
Match: A0A835YVZ9_9STRA (Cytoplasmic fragile-X interacting family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVZ9_9STRA) HSP 1 Score: 159 bits (403), Expect = 2.800e-42 Identity = 77/125 (61.60%), Postives = 97/125 (77.60%), Query Frame = 1
Query: 109 PRRVVGPSSTQLQLVRAMVRAIYDENSELRQSSGFLGKEDLKKEDVVLLKTYYEESFGFPYLLDLGGTIRATTDLGDLWYREYHLELTKEIQFPIEMSLPWIITEHIVKT--KRAMALRSSSAPS 477
P RV PS++QLQL R++VRAI DE+SELRQ SG LGKEDL K+D+ + T+Y ESF FPYL+DL GTIRA +DLGDLW+REYHLE+T+ IQFP+E S PWI+TEH+V + K A R++ S
Sbjct: 620 PPRVTAPSTSQLQLARSVVRAICDESSELRQGSGILGKEDLTKDDMEAMMTFYAESFAFPYLIDLSGTIRAASDLGDLWFREYHLEITQSIQFPLEQSFPWILTEHMVSSSGKSTSAARAAGPSS 744
BLAST of mRNA_S-dermatodea_contig12996.1815.1 vs. uniprot
Match: F0YNJ9_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNJ9_AURAN) HSP 1 Score: 149 bits (375), Expect = 1.360e-39 Identity = 70/142 (49.30%), Postives = 104/142 (73.24%), Query Frame = 1
Query: 7 QLRSMVSDWSAGIAPSEDYKKYKRSQGKVDVKDLPRRVVGPSSTQLQLVRAMVRAIYDENSELRQSSGFLGKEDLKKEDVVLLKTYYEESFGFPYLLDLGGTIRATTDLGDLWYREYHLELTKEIQFPIEMSLPWIITEHIV 432
+LR +V+DW + P +DY +Y R G+V+ P RVVGPS TQLQL+R MVR+++D+ ++L+ G K DL++ED+ L++T+Y ES F Y+L+ T+RA +DL DLWYRE++LEL+ +IQF IE+S PWI+TEH++
Sbjct: 56 KLRRLVADWPDSMEPVDDYTRYSRQDGRVEAVH-PVRVVGPSPTQLQLMRTMVRSMFDQRNQLKV--GMFSKRDLEREDLQLMETFYNESLCFQYILNHAVTLRANSDLADLWYREFYLELSGQIQFAIELSFPWILTEHVI 194
BLAST of mRNA_S-dermatodea_contig12996.1815.1 vs. uniprot
Match: F0YL26_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL26_AURAN) HSP 1 Score: 149 bits (375), Expect = 1.590e-38 Identity = 70/142 (49.30%), Postives = 104/142 (73.24%), Query Frame = 1
Query: 7 QLRSMVSDWSAGIAPSEDYKKYKRSQGKVDVKDLPRRVVGPSSTQLQLVRAMVRAIYDENSELRQSSGFLGKEDLKKEDVVLLKTYYEESFGFPYLLDLGGTIRATTDLGDLWYREYHLELTKEIQFPIEMSLPWIITEHIV 432
+LR +V+DW + P +DY +Y R G+V+ P RVVGPS TQLQL+R MVR+++D+ ++L+ G K DL++ED+ L++T+Y ES F Y+L+ T+RA +DL DLWYRE++LEL+ +IQF IE+S PWI+TEH++
Sbjct: 524 KLRRLVADWPDSMEPVDDYTRYSRQDGRVEAVH-PVRVVGPSPTQLQLMRTMVRSMFDQRNQLKV--GMFSKRDLEREDLQLMETFYNESLCFQYILNHAVTLRANSDLADLWYREFYLELSGQIQFAIELSFPWILTEHVI 662
BLAST of mRNA_S-dermatodea_contig12996.1815.1 vs. uniprot
Match: A0A8J2T1L4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1L4_9STRA) HSP 1 Score: 142 bits (358), Expect = 3.080e-36 Identity = 72/142 (50.70%), Postives = 99/142 (69.72%), Query Frame = 1
Query: 7 QLRSMVSDWSAGIAPSEDYKKYKRSQGKVDVKDLPRRVVGPSSTQLQLVRAMVRAIYDENSELRQSSGFLGKEDLKKEDVVLLKTYYEESFGFPYLLDLGGTIRATTDLGDLWYREYHLELTKEIQFPIEMSLPWIITEHIV 432
+LR +VSDW I P DY Y R G+V+ R VVGP+ TQL+L+R MVRA+YD ++LR F K+DL+KED+ L+ +Y ES F YLL+ GT+ + +DLGDLWYRE++LEL+ E+QF IE+SL WI+ EH++
Sbjct: 526 KLRRLVSDWPKNIEPITDYIYYSRQDGRVEPTHTAR-VVGPTFTQLRLLRTMVRAMYDPRNQLRVQ--FFSKKDLEKEDLQLMDYFYCESLCFQYLLNYTGTLTSNSDLGDLWYREFYLELSGEVQFAIELSLAWILAEHVI 664
BLAST of mRNA_S-dermatodea_contig12996.1815.1 vs. uniprot
Match: A0A7S2F5C9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F5C9_9STRA) HSP 1 Score: 137 bits (346), Expect = 1.240e-34 Identity = 67/152 (44.08%), Postives = 104/152 (68.42%), Query Frame = 1
Query: 10 LRSMVSDWSAGIAPSEDYKKYKRSQGK----VDVKDLPRRVVGPSSTQLQLVRAMVRAIYDENSELRQSSGFLG----KEDLKKEDVVLLKTYYEESFGFPYLLDLGGTIRATTDLGDLWYREYHLELTKEIQFPIEMSLPWIITEHIVKTK 441
LR +++DW+ G +DY+ Y R + V + P RVV S TQ Q++R +VR++YDE ++ + G + + DL+KED +L+ ++ + + FPYLL+ G TIR+ +DLGDLWYRE++LE+T+++QFPIE SLPWI+TEHI+K +
Sbjct: 49 LRRLIADWNNGQERDDDYENYSRQNKETREGVKAMNHPIRVVSASPTQYQIMRTIVRSMYDERTQ-KSHGGIMSFQKTRHDLEKEDRRILEQFFGDIYDFPYLLNYGSTIRSCSDLGDLWYREFYLEITQQVQFPIEASLPWILTEHIIKNQ 199
BLAST of mRNA_S-dermatodea_contig12996.1815.1 vs. uniprot
Match: D2VQD6_NAEGR (Component of scar regulatory complex n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VQD6_NAEGR) HSP 1 Score: 127 bits (319), Expect = 5.490e-31 Identity = 63/156 (40.38%), Postives = 96/156 (61.54%), Query Frame = 1
Query: 7 QLRSMVSDWSAGIAPSEDYKKYKRSQGKVDVKDLPRRVVGPSSTQLQLVRAMVRAIYDENSELRQSSGFLGKEDLKKEDVVLLKTYYEESFGFPYLLDLGGTIRATTDLGDLWYREYHLELTKEIQFPIEMSLPWIITEHIVKTKRAMALRSSSAP 474
+LR++ DW P +D K + +G+ + + P+R+VGPS TQL ++R+++ +Y E S Q SG K+D V K +Y +++ + YLL T+R DL DLWYRE++LE++K+IQFPIEMSLPWI+TE I+K + + S P
Sbjct: 531 ELRNLAGDWLN--EPPQDITKPTKKKGEAAL-EYPKRIVGPSFTQLHMIRSIISTLYSERSPGMQKSGIFSKKDFNDSHVESFKEFYNKTYTWNYLLAYSTTLRRAADLADLWYREFYLEISKKIQFPIEMSLPWILTEEILKRTNSALMESIIYP 683
BLAST of mRNA_S-dermatodea_contig12996.1815.1 vs. uniprot
Match: A0A6A5BI27_NAEFO (Uncharacterized protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BI27_NAEFO) HSP 1 Score: 126 bits (316), Expect = 1.390e-30 Identity = 63/156 (40.38%), Postives = 96/156 (61.54%), Query Frame = 1
Query: 7 QLRSMVSDWSAGIAPSEDYKKYKRSQGKVDVKDLPRRVVGPSSTQLQLVRAMVRAIYDENSELRQSSGFLGKEDLKKEDVVLLKTYYEESFGFPYLLDLGGTIRATTDLGDLWYREYHLELTKEIQFPIEMSLPWIITEHIVKTKRAMALRSSSAP 474
+LR++ DW P ++ K + +G+ V D P+R+VGPS TQL ++R++V +Y E S Q SG K+D V +L+ +Y +++ + YLL + R DL DLWYRE++LE++K+IQF IEMSLPWI+TE I+K + + S P
Sbjct: 529 ELRNLAGDWLQD--PPQEITKPNKKKGESSV-DFPKRIVGPSFTQLHMIRSIVSTLYSERSPGMQKSGIFSKKDFNDSHVEILRDFYNKTYMWNYLLAYSTSFRRAADLADLWYREFYLEISKKIQFQIEMSLPWILTEEILKRTNSALMESIIYP 681
BLAST of mRNA_S-dermatodea_contig12996.1815.1 vs. uniprot
Match: A0A7S1UBW1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UBW1_9STRA) HSP 1 Score: 124 bits (312), Expect = 4.310e-30 Identity = 56/93 (60.22%), Postives = 72/93 (77.42%), Query Frame = 1
Query: 163 VRAIYDENSELRQSSGFLGKEDLKKEDVVLLKTYYEESFGFPYLLDLGGTIRATTDLGDLWYREYHLELTKEIQFPIEMSLPWIITEHIVKTK 441
VRA+YDE SE RQ G + DL KEDV +L +++ESF F YLL+ GT+RA +DLGDLWYRE+ LELT +QFPIEMSLPWI+ EH++K++
Sbjct: 1 VRALYDERSEARQYRGLFARRDLGKEDVEVLTRFHQESFSFRYLLNYSGTLRACSDLGDLWYREFFLELTGRVQFPIEMSLPWILVEHVIKSQ 93 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12996.1815.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig12996.1815.1 >prot_S-dermatodea_contig12996.1815.1 ID=prot_S-dermatodea_contig12996.1815.1|Name=mRNA_S-dermatodea_contig12996.1815.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=161bp MPQLRSMVSDWSAGIAPSEDYKKYKRSQGKVDVKDLPRRVVGPSSTQLQLback to top mRNA from alignment at S-dermatodea_contig12996:3914..6316- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig12996.1815.1 ID=mRNA_S-dermatodea_contig12996.1815.1|Name=mRNA_S-dermatodea_contig12996.1815.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2403bp|location=Sequence derived from alignment at S-dermatodea_contig12996:3914..6316- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig12996:3914..6316- >mRNA_S-dermatodea_contig12996.1815.1 ID=mRNA_S-dermatodea_contig12996.1815.1|Name=mRNA_S-dermatodea_contig12996.1815.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=966bp|location=Sequence derived from alignment at S-dermatodea_contig12996:3914..6316- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |