mRNA_S-dermatodea_contig9805.17783.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9805.17783.1
Unique NamemRNA_S-dermatodea_contig9805.17783.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig9805.17783.1 vs. uniprot
Match: D7G7Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Z8_ECTSI)

HSP 1 Score: 429 bits (1104), Expect = 1.300e-131
Identity = 239/348 (68.68%), Postives = 262/348 (75.29%), Query Frame = 1
Query:    1 SAVCRLLGYCPQTDPLLPLMTVNETLLFFGGLKGVGSEK-PAGRSSARXXXXXXXXQAAVSLGPTENQLAGTLSGGNKRKLSLAVALIGDPPVLLLDEPSSGMDPGARRSMWEVISSLSASRSVVLTTHSMEECEAVCDRLGIMVGGRLRCLGTSQHLKGRFGGGYSIEVRCPATSMTQVTEMIRGLSPLARLDEMHPTLVKFSIPAGGERAGLESPVASKGGGGGDEALSTAGLSLSIAFETIEARKDELQVWDYSINQATLETIFMSFAKDQEEETASVPGVSYADTPNRDDANQNIPTQEARVEGQGH--------------GRDRRPAASMDVEMGWLGNGRIR 999
            SAVCRL+GYCPQTDPLLPLMTV+ETLLF+GGLKG+GSE                   +AVSLGPTENQ AGTLSGGNKRKLSLAVALIG PPVLLLDEPSSGMDPGARRSMWEVISSLS SRSV++TTHSMEECEAVCDRLGIMVGGRLRC+GTSQHLKGRFGGGYSIEVRCP+ SM +VTEM+  LSPLARLDEMHP+L KFS+PA GE  G   P  +  G G    ++T GLSLS AFETIE+RK ELQVWDYSI+QATLETIFMSFAK QEEE ASVPGV Y D+   D  N +   Q   +   G+              GR R P   MDVEMG LG G+ R
Sbjct: 1838 SAVCRLVGYCPQTDPLLPLMTVHETLLFYGGLKGIGSEMMDDDERETALHEAAAATMSAVSLGPTENQTAGTLSGGNKRKLSLAVALIGGPPVLLLDEPSSGMDPGARRSMWEVISSLSRSRSVIVTTHSMEECEAVCDRLGIMVGGRLRCIGTSQHLKGRFGGGYSIEVRCPSESMPKVTEMVGALSPLARLDEMHPSLAKFSVPAAGE-LGDRPPARTGFGEGVTGEVATGGLSLSKAFETIESRKTELQVWDYSISQATLETIFMSFAKHQEEEVASVPGVQYTDS---DAGNVDAGEQHHGLSSGGNSHSGDGDGGGDVRQGRSRSPQL-MDVEMGRLGGGKCR 2180          
BLAST of mRNA_S-dermatodea_contig9805.17783.1 vs. uniprot
Match: A0A6H5KGR1_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGR1_9PHAE)

HSP 1 Score: 280 bits (716), Expect = 3.850e-85
Identity = 143/174 (82.18%), Postives = 151/174 (86.78%), Query Frame = 1
Query:    1 SAVCRLLGYCPQTDPLLPLMTVNETLLFFGGLKGVGSEKPA-----GRSSARXXXXXXXXQAAVSLGPTENQLAGTLSGGNKRKLSLAVALIGDPPVLLLDEPSSGMDPGARRSMWEVISSLSASRSVVLTTHSMEECEAVCDRLGIMVGGRLRCLGTSQHLKGRFGGGYSIEV 507
            SAVCRL+GYCPQTDPLLPLMTV+ETLLF+GGLKG+GSE        G   +          +AVSLGPTENQ AGTLSGGNKRKLSLAVALIG PPVLLLDEPSSGMDPGARRSMWEVISSLSASRSV+LTTHSMEECEAVCDRLGIMVGGRLRC+GTSQHLKGRFGGGYSIEV
Sbjct:  343 SAVCRLVGYCPQTDPLLPLMTVHETLLFYGGLKGIGSEGARAMMDDGEGESALYEAAAAAMSAVSLGPTENQTAGTLSGGNKRKLSLAVALIGGPPVLLLDEPSSGMDPGARRSMWEVISSLSASRSVILTTHSMEECEAVCDRLGIMVGGRLRCIGTSQHLKGRFGGGYSIEV 516          
BLAST of mRNA_S-dermatodea_contig9805.17783.1 vs. uniprot
Match: A0A836CK00_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK00_9STRA)

HSP 1 Score: 224 bits (572), Expect = 6.870e-67
Identity = 131/269 (48.70%), Postives = 166/269 (61.71%), Query Frame = 1
Query:   19 LGYCPQTDPLLPLMTVNETLLFFGGLKGVGSEKPAGRSSARXXXXXXXXQAAVSLGPTENQLAGTLSGGNKRKLSLAVALIGDPPVLLLDEPSSGMDPGARRSMWEVISSLSAS---RSVVLTTHSMEECEAVCDRLGIMVGGRLRCLGTSQHLKGRFGGGYSIEVRCPATSMTQVTEMIRGLSPLARLDEMHPTLVKFSIPAGGERAGLESPVASKGGGGGDEALSTAGLSLSIAFETIEARKDELQVWDYSINQATLETIFMSFAKD 816
            LGYCPQ DPLL LMT  ETL+ + GL+G+        + A          + V L    ++ AGTLSGG+KRKLSLA+AL G P V LLDEPS GMDP ++R MW VI+ L +S   RS+VLTTHSMEECEA+C R+GIM  G+LRCLG+ QHLK RFGG YSIE++        V  ++  LS  A L+E H T VK+S+PA  +                        LSL+ AF TIEAR+ EL++  YSI+Q++LE IF+  AKD
Sbjct:   33 LGYCPQVDPLLDLMTARETLMLYAGLRGIPKGPELNAAVAATL-------SQVGLQEYADRRAGTLSGGSKRKLSLAIALTGQPAVALLDEPSCGMDPVSKRRMWNVIAGLRSSGRTRSIVLTTHSMEECEALCTRVGIMRDGQLRCLGSCQHLKSRFGGSYSIELQFKEGFAEGVKALVPELSRDAVLEEEHETSVKYSVPARSQ------------------------LSLADAFGTIEARRQELEIVTYSISQSSLEQIFVGIAKD 270          
BLAST of mRNA_S-dermatodea_contig9805.17783.1 vs. uniprot
Match: A0A7S2FHN6_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2FHN6_9EUKA)

HSP 1 Score: 221 bits (563), Expect = 3.130e-65
Identity = 120/264 (45.45%), Postives = 161/264 (60.98%), Query Frame = 1
Query:   19 LGYCPQTDPLLPLMTVNETLLFFGGLKGVGSEKPAGRSSARXXXXXXXXQAAVSLGPTENQLAGTLSGGNKRKLSLAVALIGDPPVLLLDEPSSGMDPGARRSMWEVISSLSASRSVVLTTHSMEECEAVCDRLGIMVGGRLRCLGTSQHLKGRFGGGYSIEVRCPATSMTQVTEMIRGLSPLARLDEMHPTLVKFSIPAGGERAGLESPVASKGGGGGDEALSTAGLSLSIAFETIEARKDELQVWDYSINQATLETIFMSFA 810
            +GYCPQ DPL+ LMT  ETL+ F  LK +       RS  +           V+L P  +++ G+ SGGNKRKLSLA+AL+G P V+ LDEPSSGMDP +RR MW++I      RS+VLTTHSMEECEA+C R+GIM  GR +CLG  QHLK ++GGGY++E+R   +    + E + GL P +RL+E H   +KF +P                         TAGLSL+  F+ +E+ K+ L V DYS +Q +LE+IF+S A
Sbjct:   28 MGYCPQADPLIELMTARETLVMFARLKNLPE-----RSIPQVVQALLDK---VTLTPYADRVCGSYSGGNKRKLSLAIALVGSPAVIFLDEPSSGMDPKSRRKMWDIIMKERTLRSIVLTTHSMEECEALCTRIGIMTAGRFQCLGGQQHLKSKYGGGYTLELRVDDSLAAGLPEKMTGLFPGSRLEEAHAGKLKFELP-------------------------TAGLSLATVFQKMESHKEALGVLDYSASQPSLESIFLSLA 258          
BLAST of mRNA_S-dermatodea_contig9805.17783.1 vs. uniprot
Match: A0A7S3HGW2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HGW2_9STRA)

HSP 1 Score: 225 bits (573), Expect = 4.320e-65
Identity = 128/283 (45.23%), Postives = 164/283 (57.95%), Query Frame = 1
Query:    4 AVCRLLGYCPQTDPLLPLMTVNETLLFFGGLKGVGSEKPAGRSSARXXXXXXXXQAAVSLGPTENQLAGTLSGGNKRKLSLAVALIGDPPVLLLDEPSSGMDPGARRSMWEVISSLSASRSVVLTTHSMEECEAVCDRLGIMVGGRLRCLGTSQHLKGRFGGGYSIEVRCPATSMTQVTEMIRGLSPLARLDEMHPTLVKFSIPAGGERAGLESPVASKGGGGGDEALSTAGLSLSIAFETIEARKDELQVWDYSINQATLETIFMSFAKDQEEETASVPGVS 852
            A   ++GYCPQ DPLL LM   ETL FFG ++G+  E    R +             V L    ++  GT SGGNKRKLSLAVALIGDP VL LDEPS+GMDP ARR+MW VI  +SA R VVL THSMEE EA+C R+G+MV GR++C+G++QHLK RFG GY +E+R     +     +       A ++E+H   V+  +                          +  L L+ AF  +E  K  LQ+ DY+I+Q TLE +F+ FAKDQEEET  V GVS
Sbjct:  115 ATMSMIGYCPQVDPLLDLMNGYETLWFFGRIRGIPKEVLEKRVNDLILQ--------VGLERFAHKPCGTYSGGNKRKLSLAVALIGDPRVLFLDEPSTGMDPEARRNMWTVIEQVSAERCVVLVTHSMEEVEALCTRMGVMVSGRMQCIGSAQHLKSRFGLGYQVEIRTLPARVQDCIALCEAQMLAAVVEEVHGGYVRLKV--------------------------SKDLDLAAAFSALEHNKASLQILDYNISQCTLEQVFLKFAKDQEEETGHVGGVS 363          
BLAST of mRNA_S-dermatodea_contig9805.17783.1 vs. uniprot
Match: A0A7S2BPZ2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BPZ2_9STRA)

HSP 1 Score: 221 bits (562), Expect = 3.850e-64
Identity = 126/283 (44.52%), Postives = 167/283 (59.01%), Query Frame = 1
Query:    4 AVCRLLGYCPQTDPLLPLMTVNETLLFFGGLKGVGSEKPAGRSSARXXXXXXXXQAAVSLGPTENQLAGTLSGGNKRKLSLAVALIGDPPVLLLDEPSSGMDPGARRSMWEVISSLSASRSVVLTTHSMEECEAVCDRLGIMVGGRLRCLGTSQHLKGRFGGGYSIEVRCPATSMTQVTEMIRGLSPLARLDEMHPTLVKFSIPAGGERAGLESPVASKGGGGGDEALSTAGLSLSIAFETIEARKDELQVWDYSINQATLETIFMSFAKDQEEETASVPGVS 852
            AV RL+GYCPQ DPLL LMT  ETL  FG LKG+    P    +A            V L    +Q+ G+ SGGNKRKLS AVALIG PP+LLLDEPSSGMDP ARR MW+ +S  +  RSV++TTHSM+ECEA+  R+GIM  G LRC+G+ QHLK R G G+ +E RC       V + I+   P A ++      ++F+IP       L+                   L+L+ AF  +E RKDE  + DYSI+Q +LE++F+ FA+D  + TA+   ++
Sbjct:  112 AVARLVGYCPQADPLLGLMTATETLTMFGRLKGI---PPVDLEAAVAATLEH-----VGLSVFAHQMCGSYSGGNKRKLSFAVALIGGPPILLLDEPSSGMDPIARRQMWDAVSRAAHGRSVIITTHSMQECEALATRVGIMAAGTLRCIGSCQHLKNRHGSGFWVETRCDEGRTVHVVDFIQKEFPGAGVENECGGFLRFAIPT------LDR------------------LTLAGAFRLLEDRKDEEGIHDYSISQGSLESVFLRFAEDDPQRTAAADEIA 362          
BLAST of mRNA_S-dermatodea_contig9805.17783.1 vs. uniprot
Match: A0A7S1UEC4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UEC4_9STRA)

HSP 1 Score: 217 bits (552), Expect = 6.900e-61
Identity = 130/291 (44.67%), Postives = 162/291 (55.67%), Query Frame = 1
Query:    7 VCRLLGYCPQTDPLLPLMTVNETLLFFGGLKGVGSEKPAGRSSARXXXXXXXXQAAVSLGPTENQLAGTLSGGNKRKLSLAVALIGDPPVLLLDEPSSGMDPGARRSMWEVISSLSASR--SVVLTTHSMEECEAVCDRLGIMVGGRLRCLGTSQHLKGRFGGGYSIEVRCPATSMTQVTEMIRGLS----PLARLDEMHPTLVKFSIPAGGERAGLESPVASKGGGGGDEALSTAGLSLSIAFETIEARKDELQVWDYSINQATLETIFMSFAKDQEEETASVPGVSYAD 861
            V + +GYCPQ DP+  LMT  ETL F+G +KG+  +       +          A        + +A + SGGNKRKLSL VALIGDP VL LDEPS+GMDPGARRSMW  I +LS  R  +++LTTHSMEECEA+C R+GIMVGGRLRCLG+SQHLK RF   Y +E R    +        R L+    P AR+ E H    + S+P                            + L   FE IEA ++E  V +YS++Q TLE +FM FAK Q EE   V GV Y D
Sbjct:  280 VRKRVGYCPQIDPIFELMTARETLAFYGRIKGLDPDSVGAAVESILELLDLTLYA--------DMIARSYSGGNKRKLSLGVALIGDPEVLFLDEPSTGMDPGARRSMWSCIEALSRRRKITIILTTHSMEECEALCTRIGIMVGGRLRCLGSSQHLKQRFLHAYEVEFRIEEAAGAPGGAFERFLAARLGPGARVVERHSPHCRVSLPG-------------------------TAMPLGRIFEAIEAHQEEAGVLEYSVSQGTLEQVFMGFAKRQREERGQVAGVVYED 537          
BLAST of mRNA_S-dermatodea_contig9805.17783.1 vs. uniprot
Match: A0A7S3ZF35_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZF35_9EUKA)

HSP 1 Score: 222 bits (566), Expect = 8.010e-60
Identity = 122/287 (42.51%), Postives = 169/287 (58.89%), Query Frame = 1
Query:    7 VCRLLGYCPQTDPLLPLMTVNETLLFFGGLKGVGSEKPAGRSSARXXXXXXXXQAAVSLGPTENQLAGTLSGGNKRKLSLAVALIGDPPVLLLDEPSSGMDPGARRSMWEVISSLSASRSVVLTTHSMEECEAVCDRLGIMVGGRLRCLGTSQHLKGRFGGGYSIEVRCPATSMTQVTEMIRGLSPLARLDEMHPTLVKFSIPAGGERAGLESPVASKGGGGGDEALSTAGLSLSIAFETIEARKDELQVWDYSINQATLETIFMSFAKDQEEETASVPGVSYADTP 867
            V +L+GYCPQ D LLP MT  ETL  F   KGV       +S           Q ++ +   +++  G  SGGNKRKLS+ +AL+GDPP++ LDEPS+GMDPGARR MW++ISS  A+RSV+LTTHSMEECEA+C R+GIMVGGRLRCLG+SQ LK R+G G+ ++++   +S   V   ++     A + E     +KF I                           +  SL+  F  IE  + E  + +YS+++ TLE IF+ FA+ QEEE  +V G++  D+P
Sbjct: 1296 VRKLIGYCPQFDALLPNMTARETLRMFAKFKGVP------KSKMEPYLADMLKQLSLDINGWQDKPCGGYSGGNKRKLSVGIALVGDPPIVFLDEPSTGMDPGARRFMWDLISSTMATRSVILTTHSMEECEALCSRIGIMVGGRLRCLGSSQRLKSRYGSGHQLDMKVKKSSAPSVKRWVKDEFKGATIIEDQVEYIKFRI--------------------------ASASSLASVFRKIEESRVEKGIEEYSVSETTLEQIFLHFARQQEEEKGAVAGLTGIDSP 1550          
BLAST of mRNA_S-dermatodea_contig9805.17783.1 vs. uniprot
Match: A0A2R6WXZ6_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WXZ6_MARPO)

HSP 1 Score: 221 bits (564), Expect = 1.550e-59
Identity = 130/272 (47.79%), Postives = 165/272 (60.66%), Query Frame = 1
Query:    7 VCRLLGYCPQTDPLLPLMTVNETLLFFGGLKGVGSEKPAGRSSARXXXXXXXXQAAVSLGPTENQLAGTLSGGNKRKLSLAVALIGDPPVLLLDEPSSGMDPGARRSMWEVISSLSASR--SVVLTTHSMEECEAVCDRLGIMVGGRLRCLGTSQHLKGRFGGGYSIEVRCPATS-MTQVTEMIRGLSPLARLDEMHPTLVKFSIPAGGERAGLESPVASKGGGGGDEALSTAGLSLSIAFETIEARKDELQVWDYSINQATLETIFMSFAK 813
            V + +GYCPQ DPLL LMT  E L  +  LKGV           R          A  L    +Q++G  SGGNKRKL+LA+AL+GDP V+ LDEPSSGMDP ARRSMW+++     +R  S+VLTTHSMEECEA+C R+G+MV GRL CLG+ QHLK RFG GY++E+RC     M ++ E I    P ++LDE H T VK+ IP       LE                  G+SLS  F  IEA KD + + DYS++Q++LE IF+SFAK
Sbjct: 1684 VQKYIGYCPQFDPLLDLMTAREHLDMYARLKGV--------PDIRVKSTVDEVLEAAGLQKYADQVSGVYSGGNKRKLALAIALVGDPAVVFLDEPSSGMDPVARRSMWDLVQDAVNNRQVSMVLTTHSMEECEALCGRVGVMVSGRLMCLGSIQHLKSRFGSGYNLEMRCKRPEDMQRLHEFITRSFPGSKLDEQHNTRVKYCIP-------LE------------------GVSLSKVFGVIEAEKDLVGLEDYSVSQSSLEQIFISFAK 1922          
BLAST of mRNA_S-dermatodea_contig9805.17783.1 vs. uniprot
Match: A0A7S1UE30_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UE30_9STRA)

HSP 1 Score: 221 bits (562), Expect = 2.470e-59
Identity = 135/293 (46.08%), Postives = 167/293 (57.00%), Query Frame = 1
Query:    1 SAVCRLLGYCPQTDPLLPLMTVNETLLFFGGLKGVGSEKPAGRSSARXXXXXXXXQAAVSLGPTENQLAGTLSGGNKRKLSLAVALIGDPPVLLLDEPSSGMDPGARRSMWEVISSLSASR--SVVLTTHSMEECEAVCDRLGIMVGGRLRCLGTSQHLKGRFGGGYSIEVRCPATSMTQVTEMIRGLS----PLARLDEMHPTLVKFSIPAGGERAGLESPVASKGGGGGDEALSTAGLSLSIAFETIEARKDELQVWDYSINQATLETIFMSFAKDQEEETASVPGVSYAD 861
            S + R +GYCPQ D LL L+TV+E L  +  +KGV   +P  R  A         + A       ++ AG+LSGGNKRKLSL VALIGDP VL LDEPS+GMDPGARRSMW  I +LS  R  +++LTTHSMEECEA+C R+GIMVGGRLRCLG+SQHLK RF   Y +E R    +        R L+    P AR+ E H    + S+P                            + L   FE IEA ++E  V +YS++Q TLE +FM FAK Q EE   V GV Y D
Sbjct: 1048 SRIRRRIGYCPQFDALLELLTVSEHLELYARIKGVPEGEPMQRVVAGKLRQMDLEKFA-------DKAAGSLSGGNKRKLSLGVALIGDPEVLFLDEPSTGMDPGARRSMWSCIEALSRRRKITIILTTHSMEECEALCTRIGIMVGGRLRCLGSSQHLKQRFLHAYEVEFRIEEAAGAPGGAFERFLAARLGPGARVVERHSPHCRVSLPG-------------------------TAMPLGRIFEAIEAHQEEAGVLEYSVSQGTLEQVFMGFAKRQREERGQVAGVVYED 1308          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9805.17783.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7Z8_ECTSI1.300e-13168.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KGR1_9PHAE3.850e-8582.18ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A836CK00_9STRA6.870e-6748.70P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2FHN6_9EUKA3.130e-6545.45Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S3HGW2_9STRA4.320e-6545.23Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2BPZ2_9STRA3.850e-6444.52Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1UEC4_9STRA6.900e-6144.67Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3ZF35_9EUKA8.010e-6042.51Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A2R6WXZ6_MARPO1.550e-5947.79Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A0A7S1UE30_9STRA2.470e-5946.08Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9805contigS-dermatodea_contig9805:3288..6962 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score392.1
Seed ortholog evalue2.6e-106
Seed eggNOG ortholog2880.D7G7Z8
Preferred nameABCA6
KEGG koko:K05643,ko:K05645
KEGG TC3.A.1.211
KEGG Pathwayko02010,map02010
GOsGO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0009653,GO:0010876,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0030587,GO:0031288,GO:0032502,GO:0033036,GO:0042623,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044464,GO:0048856,GO:0051179,GO:0051234,GO:0051703,GO:0051704,GO:0055085,GO:0071702,GO:0090702,GO:0099120
EggNOG free text desc.ATPase activity, coupled to transmembrane movement of substances
EggNOG OGsCOG1131@1,KOG0059@2759
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Hectar predicted targeting categoryother localisation
Exons5
Model size1390
Cds size999
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925432.1717565-UTR-S-dermatodea_contig9805:3287..33441622925432.1717565-UTR-S-dermatodea_contig9805:3287..3344Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9805 3288..3344 +
1694079929.4564166-UTR-S-dermatodea_contig9805:3287..33441694079929.4564166-UTR-S-dermatodea_contig9805:3287..3344Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9805 3288..3344 +
1622925432.2519045-UTR-S-dermatodea_contig9805:6628..69621622925432.2519045-UTR-S-dermatodea_contig9805:6628..6962Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9805 6629..6962 +
1694079929.5090115-UTR-S-dermatodea_contig9805:6628..69621694079929.5090115-UTR-S-dermatodea_contig9805:6628..6962Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9805 6629..6962 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925432.190676-CDS-S-dermatodea_contig9805:3344..34381622925432.190676-CDS-S-dermatodea_contig9805:3344..3438Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9805 3345..3438 +
1694079929.4668987-CDS-S-dermatodea_contig9805:3344..34381694079929.4668987-CDS-S-dermatodea_contig9805:3344..3438Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9805 3345..3438 +
1622925432.2040236-CDS-S-dermatodea_contig9805:3903..40751622925432.2040236-CDS-S-dermatodea_contig9805:3903..4075Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9805 3904..4075 +
1694079929.4752347-CDS-S-dermatodea_contig9805:3903..40751694079929.4752347-CDS-S-dermatodea_contig9805:3903..4075Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9805 3904..4075 +
1622925432.2176337-CDS-S-dermatodea_contig9805:4358..45391622925432.2176337-CDS-S-dermatodea_contig9805:4358..4539Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9805 4359..4539 +
1694079929.4836996-CDS-S-dermatodea_contig9805:4358..45391694079929.4836996-CDS-S-dermatodea_contig9805:4358..4539Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9805 4359..4539 +
1622925432.2299-CDS-S-dermatodea_contig9805:5679..59281622925432.2299-CDS-S-dermatodea_contig9805:5679..5928Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9805 5680..5928 +
1694079929.4920235-CDS-S-dermatodea_contig9805:5679..59281694079929.4920235-CDS-S-dermatodea_contig9805:5679..5928Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9805 5680..5928 +
1622925432.2417674-CDS-S-dermatodea_contig9805:6325..66281622925432.2417674-CDS-S-dermatodea_contig9805:6325..6628Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9805 6326..6628 +
1694079929.5004754-CDS-S-dermatodea_contig9805:6325..66281694079929.5004754-CDS-S-dermatodea_contig9805:6325..6628Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9805 6326..6628 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9805.17783.1prot_S-dermatodea_contig9805.17783.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9805 3345..6628 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9805.17783.1

>prot_S-dermatodea_contig9805.17783.1 ID=prot_S-dermatodea_contig9805.17783.1|Name=mRNA_S-dermatodea_contig9805.17783.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=333bp
MTVNETLLFFGGLKGVGSEKPAGRSSARRRRAAAAAQAAVSLGPTENQLA
GTLSGGNKRKLSLAVALIGDPPVLLLDEPSSGMDPGARRSMWEVISSLSA
SRSVVLTTHSMEECEAVCDRLGIMVGGRLRCLGTSQHLKGRFGGGYSIEV
RCPATSMTQVTEMIRGLSPLARLDEMHPTLVKFSIPAGGERAGLESPVAS
KGGGGGDEALSTAGLSLSIAFETIEARKDELQVWDYSINQATLETIFMSF
AKDQEEETASVPGVSYADTPNRDDANQNIPTQEARVEGQGHGRDRRPAAS
MDVEMGWLGNGRIREEGAQVGPVAEEETSALL*
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mRNA from alignment at S-dermatodea_contig9805:3288..6962+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9805.17783.1 ID=mRNA_S-dermatodea_contig9805.17783.1|Name=mRNA_S-dermatodea_contig9805.17783.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3675bp|location=Sequence derived from alignment at S-dermatodea_contig9805:3288..6962+ (Saccorhiza dermatodea SderLu1190fm monoicous)
AGCGCTGTGTGCCGACTGTTGGGGTACTGCCCGCAGACGGACCCCCTGCT GCCGCTGATGACAGTGAACGAGACCCTCTTGTTCTTCGGTGGCCTGAAAG GTGTCGGTTCGGAGAAGCCCGCAGGAAGATCTTCCGCTCGACGGAGAAGG GGTAAGACGCGGCCGCGAAAATGTTAACATTAGGTTTACAAGCGAGCGGC GTCACTCCATGCGGCTGTTGTTTTTGATATTTTGTATTAGTAAAGGTTGA GTGTTTGATGAAAAGTCGCACGATATGTCGGTGCTCGCGCGATGGCGACC GACGTGAGCGATGATGATCGTGATGGTGCCACATTAACTGGTCTATCTCA AAACCCAGCTGTGGTCAAGTCAGAATATCCATGGATCGAGGGAAACTAAA CGGAACCCTCGCAAAATTCAAACAAAAGCAGAAACAGAAACAGAAACGCT CTTTAAACGCACGGGACGACTCGGTGAACAACATTAAACTATGTACACAG CAGAGGCGCAAGGCTAAGCGAAACACCACTACTACTATCGACGACGGCGT TTTGTAACATATCCGTTCGTTTCGTCCACGATGCAGGCGCCGGCCGCGAC AGCTCGCTCCAAAAAGCGGCGGCGGCGGCGCAAGCTGCTGTCAGCCTTGG TCCTACCGAAAACCAGCTGGCGGGGACCTTGAGCGGAGGGAACAAGAGGA AGCTATCGTTAGCGGTGGCTCTGATCGGAGACCCTCCTGTGCTCCTTCTC GACGAGCCCAGCTCGGGGATGGACCCCGGGGCTAGGAGGTGGGGTTCTGA CGGGACTTGGTTGCTGTTGGTACCGTACCGCCTGTTTTGTTGGTGATAGT CCAAGGAGTGGTTTTGGGGCGTTTAATGGTTTCAGGGCTATAGGTGGTAC ATCTCACACTACGGCATGCCCGCAAACAGCTGAATTTTTCGCACTTGAGG AGAGGATGCGAAGGCGGCATCTCGTCAAGCGCGTTTTTTGTCCCCGAATT GTCAAGTACACGTCAATGTGGCACTGACCCTCCCAGCTTGCTGCCTGCCC CTTTGCGCGTTACTGGCGCAGGTCCATGTGGGAAGTAATCTCCTCCCTTT CGGCAAGCCGCAGCGTGGTTCTCACGACACACTCCATGGAAGAGTGCGAG GCCGTTTGTGATCGGTTAGGCATCATGGTCGGAGGAAGGCTGCGGTGTCT CGGCACGTCGCAGCACCTCAAGGGAAGGTTCGGCGGCGGCTACTCCATCG AGGTGGGCATCCTGCACGTCGGGCTCTTTTTCGCAGCTGTAGATGAAGCA GTTGTAAGGCAGATCGTCGGGCTCTCGTCGCCGTTCGCTGTCTGGTTGCA AACGTACCCGTAGTGTTTTCTCTGTTTGAGTCGATGCCACAGAGGGCAGG CCGCTGTTTCGCAAACATCCCTGTCAGCGTGGAGGACGGCAACCCCGGCG GTCAACCGCAGAAAAAGGGCAGTGCTGCACATGTGTCATGGCTGGTACGA ACGTGGCCGGGTGGCATCTAAAGCTCCACTACTGGCGCGCCTAAAGGGGC GGTTGCAACGTCCTGTATATCTCACTGTCCTACTGCTGACGAGGTGCGTT TTTGTCGCGACGGTATATAAGAAGGGCGTGCGCGTGTGTGCGTTATGGAC CAATCCACCCGACTTGCGTTGGAATGGTTGGGAGTCCGTGGGAGGTTGGA ATCGTGCGTTGCGATCGCACCTCGTTCCCCGCAACTCTTCCACTTACAAG CACACATAGCCTTTGCAGGGTCATTTCTTGGGTCTCTTGCCTCGTTGTTA TGGCGTGCAATACGTAGTCGTGTGTGTGTGAGTACCTCACATATGGCCGA CCGCCCATGTCCGAATCCCATGTGTGTGGTCCACCAGTCTCTCCCCGGTT CACGCCTTAGGTTTTTATCGCGTATTGGAGTGCAGCAGTTCCGCAGCTCA CCGATCCCTAGGATTTTTGTAGACCCCCACATGTTAGCTGAAATATAGTA AGTGAGACGTGTATCCATCATTTTTGTAGGAGCAAAGTGATTGAACGTGA TGTATGTGCATGTATCATACATTACTATCGTACAGGATAATATCATTCTT AAATATAGCGCAGCGTAATAGAAGAGGCGGAGATGGTAGGGCAGCGATAG CCCCCGCTCCCGCTCCCCGGGGGAGTTGGGTTCCTATCAACGAAATGTAT ACGCACCTCTCGTGTGCAGCGTGGAAACGGAGTCTGATTGATGCACTTGA CGGCTCTTTCTACCGCTCACCCGCAAAACTGTCAATCTCTTTCAAAAGCT AAATGAACCAATTCAATGAACGCGTGTTCGAAGCATGACACACTATCGAT ACTCTTCCGCCGCCGCCCTGACGATTCGTGTGTATCCCCCAGGTTCGCTG CCCCGCCACTTCGATGACCCAAGTCACCGAAATGATACGAGGACTGTCTC CCCTGGCGAGACTAGACGAGATGCATCCCACTCTCGTCAAGTTCAGCATT CCGGCCGGGGGCGAGCGGGCGGGATTGGAGTCGCCCGTCGCGAGCAAGGG AGGGGGGGGGGGGGACGAGGCGTTGTCTACTGCGGGACTGAGCTTGTCCA TCGCGTTCGAGACGATCGAAGCGAGGAAAGACGAGTTACAGGTTCGTGGG CACGCTTGTTGGTCGACTGCTACAACTGTAGGTACTGTACAAGTGTGCGT ATAGAAACACAAGCAGTATATGCGGGGTGCGTATTGTGTTTGATCTCTAT GATGGAGGGGACAGGTCATCTCGTGTTTTCTTGCCTGGTCAGCGCGATGA TGCTTCCGTTACTTGAGCATGGTTTGGGGATATGGCGTACCTATTATAGC AACACATCAGAACTTCCACCCGGTCCTTATATTTCTTCATGTGGTACTAT ATGCAAGTATACAGATACCGTGGCGAGTCTTGGCTTGTGGTTCACAACAG ACTTTGCGCTCACGACTCGACGACAAAAGCTACCGTAGCGGCGGACCGAA CGTCTGGACCGTTGCACCGTTTTTTCGCTCTTCGAAAGGTGTGGGACTAC TCGATCAACCAGGCCACGCTCGAGACCATCTTCATGAGCTTCGCCAAGGA CCAAGAGGAAGAAACCGCCAGCGTGCCGGGCGTCAGTTATGCCGACACCC CGAACCGTGACGACGCCAACCAGAACATTCCCACCCAAGAAGCTCGCGTT GAAGGCCAGGGCCACGGGCGAGATCGCCGCCCCGCGGCTTCGATGGATGT GGAGATGGGCTGGCTGGGAAATGGGCGTATCCGCGAGGAAGGCGCACAGG TCGGCCCTGTGGCAGAGGAGGAAACCTCTGCGCTTTTGTGATGTTTTCGC GTTGGTGGAGAAGAGGAGGATAAGGAAGTAACGGCGGTGCCCACAGCGCG CAGTCCCTGGTGCAGTGAGGCAGTGTTTTTGTTTTGGATTATTTGTTTGT GTTGTGATGGTTAATTTGCCCTTAGATGCCCCGTCTCACCCGCGGAATGA ATTCTGTCTAGGCTTCTCTCCTGTATGTGCATTGTTTGCGTGCTGCGCTG TGCCCGCGTGCATCGCATTCTTCGTTGTCAGTCTGCGCAAGTTGAACCTG TTTGTATCGAGCTGGCGTCCCGTAACTCCAGCTGTTGGGGTGATGACGAT CCTCTCGTCTTCACACATGGGAGGG
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Coding sequence (CDS) from alignment at S-dermatodea_contig9805:3288..6962+

>mRNA_S-dermatodea_contig9805.17783.1 ID=mRNA_S-dermatodea_contig9805.17783.1|Name=mRNA_S-dermatodea_contig9805.17783.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1998bp|location=Sequence derived from alignment at S-dermatodea_contig9805:3288..6962+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGACAGTGAACGAGACCCTCTTGTTCTTCGGTGGCCTGAAAGGTGTCGG
TTCGGAGAAGCCCGCAGGAAGATCTTCCGCTCGACGGAGAAGGGATGACA
GTGAACGAGACCCTCTTGTTCTTCGGTGGCCTGAAAGGTGTCGGTTCGGA
GAAGCCCGCAGGAAGATCTTCCGCTCGACGGAGAAGGGCGGCGGCGGCGG
CGCAAGCTGCTGTCAGCCTTGGTCCTACCGAAAACCAGCTGGCGGGGACC
TTGAGCGGAGGGAACAAGAGGAAGCTATCGTTAGCGGTGGCTCTGATCGG
AGACCCTCCTGTGCTCCTTCTCGACGAGCCCAGCTCGGGGATGGACCCCG
GGGCTAGGAGCGGCGGCGGCGGCGCAAGCTGCTGTCAGCCTTGGTCCTAC
CGAAAACCAGCTGGCGGGGACCTTGAGCGGAGGGAACAAGAGGAAGCTAT
CGTTAGCGGTGGCTCTGATCGGAGACCCTCCTGTGCTCCTTCTCGACGAG
CCCAGCTCGGGGATGGACCCCGGGGCTAGGAGGTCCATGTGGGAAGTAAT
CTCCTCCCTTTCGGCAAGCCGCAGCGTGGTTCTCACGACACACTCCATGG
AAGAGTGCGAGGCCGTTTGTGATCGGTTAGGCATCATGGTCGGAGGAAGG
CTGCGGTGTCTCGGCACGTCGCAGCACCTCAAGGGAAGGTTCGGCGGCGG
CTACTCCATCGAGGTCCATGTGGGAAGTAATCTCCTCCCTTTCGGCAAGC
CGCAGCGTGGTTCTCACGACACACTCCATGGAAGAGTGCGAGGCCGTTTG
TGATCGGTTAGGCATCATGGTCGGAGGAAGGCTGCGGTGTCTCGGCACGT
CGCAGCACCTCAAGGGAAGGTTCGGCGGCGGCTACTCCATCGAGGTTCGC
TGCCCCGCCACTTCGATGACCCAAGTCACCGAAATGATACGAGGACTGTC
TCCCCTGGCGAGACTAGACGAGATGCATCCCACTCTCGTCAAGTTCAGCA
TTCCGGCCGGGGGCGAGCGGGCGGGATTGGAGTCGCCCGTCGCGAGCAAG
GGAGGGGGGGGGGGGGACGAGGCGTTGTCTACTGCGGGACTGAGCTTGTC
CATCGCGTTCGAGACGATCGAAGCGAGGAAAGACGAGTTACAGGTTCGCT
GCCCCGCCACTTCGATGACCCAAGTCACCGAAATGATACGAGGACTGTCT
CCCCTGGCGAGACTAGACGAGATGCATCCCACTCTCGTCAAGTTCAGCAT
TCCGGCCGGGGGCGAGCGGGCGGGATTGGAGTCGCCCGTCGCGAGCAAGG
GAGGGGGGGGGGGGGACGAGGCGTTGTCTACTGCGGGACTGAGCTTGTCC
ATCGCGTTCGAGACGATCGAAGCGAGGAAAGACGAGTTACAGGTGTGGGA
CTACTCGATCAACCAGGCCACGCTCGAGACCATCTTCATGAGCTTCGCCA
AGGACCAAGAGGAAGAAACCGCCAGCGTGCCGGGCGTCAGTTATGCCGAC
ACCCCGAACCGTGACGACGCCAACCAGAACATTCCCACCCAAGAAGCTCG
CGTTGAAGGCCAGGGCCACGGGCGAGATCGCCGCCCCGCGGCTTCGATGG
ATGTGGAGATGGGCTGGCTGGGAAATGGGCGTATCCGCGAGGAAGGCGCA
CAGGTCGGCCCTGTGGCAGAGGAGGAAACCTCTGCGCTTTTGTGAGTGTG
GGACTACTCGATCAACCAGGCCACGCTCGAGACCATCTTCATGAGCTTCG
CCAAGGACCAAGAGGAAGAAACCGCCAGCGTGCCGGGCGTCAGTTATGCC
GACACCCCGAACCGTGACGACGCCAACCAGAACATTCCCACCCAAGAAGC
TCGCGTTGAAGGCCAGGGCCACGGGCGAGATCGCCGCCCCGCGGCTTCGA
TGGATGTGGAGATGGGCTGGCTGGGAAATGGGCGTATCCGCGAGGAAGGC
GCACAGGTCGGCCCTGTGGCAGAGGAGGAAACCTCTGCGCTTTTGTGA
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