prot_S-dermatodea_contig9683.17684.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9683.17684.1
Unique Nameprot_S-dermatodea_contig9683.17684.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length112
Homology
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BLAST of mRNA_S-dermatodea_contig9683.17684.1 vs. uniprot
Match: A0A6H5KQY7_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY7_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 5.090e-16
Identity = 40/57 (70.18%), Postives = 46/57 (80.70%), Query Frame = 0 
Query:    2 MELQVRTAKMHADAEGGTAAHSLYKGSLENPAEASLFRSKMTLNTSKPVQHQLPSRS 58
            ME QVRTA MH +AEGG+A+HSLYKG L+NP EASLFRS+MT NT  P   QLPS+S
Sbjct:  802 MEFQVRTALMHVEAEGGSASHSLYKGDLDNPEEASLFRSRMTPNTLSPAHRQLPSKS 858
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BLAST of mRNA_S-dermatodea_contig9683.17684.1 vs. uniprot
Match: D7G573_ECTSI (GTP diphosphokinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G573_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 3.290e-15
Identity = 65/125 (52.00%), Postives = 75/125 (60.00%), Query Frame = 0 
Query:    2 MELQVRTAKMHADAEGGTAAHSLYKGSLENPAEASLFRSKMTLNTSKPVQHQLPSRS--GRAANHGTETA---APAAATD-----ASDVTALHTKTRNGGLG---DGGGG--VASENESDRNPQP 111
            ME QVRTA MH  AEGG+A+HSLYKG L+NP EASLFRSKMT N   P   QL S+S  G AA     TA   +PAA        A+ V  L +K R G LG   DGGG   V+  + SDR P+P
Sbjct:  808 MEFQVRTALMHVAAEGGSASHSLYKGDLDNPEEASLFRSKMTPNILSPAHRQLQSKSKSGEAATALQPTADGGSPAANVSEKGPAAAAVPLLESK-RCGKLGVKSDGGGATPVSDLDTSDRCPEP 931
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9683.17684.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KQY7_9PHAE5.090e-1670.18EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D7G573_ECTSI3.290e-1552.00GTP diphosphokinase n=1 Tax=Ectocarpus siliculosus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21262:SF12GTP DIPHOSPHOKINASE CRSH, CHLOROPLASTIC-RELATEDcoord: 2..55
NoneNo IPR availablePANTHERPTHR21262GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASEcoord: 2..55
NoneNo IPR availableSUPERFAMILY81301Nucleotidyltransferasecoord: 2..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9683contigS-dermatodea_contig9683:5798..6578 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9683.17684.1mRNA_S-dermatodea_contig9683.17684.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9683 4956..7313 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9683.17684.1 ID=prot_S-dermatodea_contig9683.17684.1|Name=mRNA_S-dermatodea_contig9683.17684.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=112bp
MMELQVRTAKMHADAEGGTAAHSLYKGSLENPAEASLFRSKMTLNTSKPV
QHQLPSRSGRAANHGTETAAPAAATDASDVTALHTKTRNGGLGDGGGGVA
SENESDRNPQP*
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