prot_S-dermatodea_contig967.17677.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig967.17677.1
Unique Nameprot_S-dermatodea_contig967.17677.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length481
Homology
BLAST of mRNA_S-dermatodea_contig967.17677.1 vs. uniprot
Match: A0A6H5KFS2_9PHAE (DNA topoisomerase 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFS2_9PHAE)

HSP 1 Score: 535 bits (1379), Expect = 1.660e-171
Identity = 298/446 (66.82%), Postives = 339/446 (76.01%), Query Frame = 0
Query:    2 VPNYSPRDVIENLKRRINGQAFVEMQPWYDGFAGIIEAKVGKKGLEGGYSCRGLIERIDDTTVEITELQVRKWTQEYKQFLESLLPGAEDLKAKAGAGKKGEKDKAAKD----KTPVRNIKDFRENHTDTTVHFTVTMAVEDLDAIDKGDGLHKFFKLESSVTTTNMVLFDQDGQLTKYESPQHIMEDFFVLRTEYYDRRKTALLNKMQSEWSKLDNKVRFILAVVEGRLKVSNRKKTELLAELKREGYDLFLPAAAKGRVAGG--EADGEEGEEEDDRDQLSKGYDYLLGMKLWSLTLERVGLLENELANKTADMTALKATTPSEIWLRDLDALGDILDEIAQINAKQDVEDAKQRKNAGKKKGGRAKGRGNQDEDSDFEDGPSKKTSKAKGKSHPXXXXX-----SRAIVPELVLSAGGGKVSPAFAEAEASGKLVTDVKPAQE 436
            VPNYSP DVIENLKRRI G  FVEMQPWY GFAG IEAKVGKKG EG Y+ RG++ R+DDTTVEITEL VRKWTQ+YKQFLESLLPGAED K+K   G               K+P R IKDF+ENHTDTTVHFTVTM++EDLDA+DKGDGL+KFFKLESSV+T NMVLFDQDG L +YESPQHIME+F  LR+E+YDRRKT+LLNK+QSEWSKLDNKVRFILAVVE R++V+NRKK+ELL +LKREGYDLFLPA +K RVAG   + +GE+G E DD D LSKGYDYLLGMK+WSLTLERV LLENEL  KT +M  LKAT PSE+WL+DLDALGD+LDEI +I  KQ+VEDAKQRKNAGK+KGG                               XXXXX     +RA VPELV  + GGKVSPAF +AE+ GK    VK + E
Sbjct:  793 VPNYSPHDVIENLKRRIKGDQFVEMQPWYKGFAGSIEAKVGKKGFEGSYTVRGIVNRVDDTTVEITELPVRKWTQDYKQFLESLLPGAEDAKSKDAKGNXXXXXXXXXXXXXXKSPTRCIKDFKENHTDTTVHFTVTMSMEDLDALDKGDGLYKFFKLESSVSTNNMVLFDQDGHLERYESPQHIMEEFITLRSEFYDRRKTSLLNKLQSEWSKLDNKVRFILAVVEDRMQVNNRKKSELLEQLKREGYDLFLPATSKLRVAGSVEDGEGEDGGEADDGDTLSKGYDYLLGMKIWSLTLERVKLLENELEAKTEEMRILKATAPSELWLKDLDALGDVLDEIDEIIRKQEVEDAKQRKNAGKRKGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRAPVPELVFCSSGGKVSPAFGQAESMGKFFAVVKKSDE 1238          
BLAST of mRNA_S-dermatodea_contig967.17677.1 vs. uniprot
Match: A0A835YRC0_9STRA (DNA topoisomerase 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRC0_9STRA)

HSP 1 Score: 307 bits (787), Expect = 2.160e-90
Identity = 177/345 (51.30%), Postives = 223/345 (64.64%), Query Frame = 0
Query:    2 VPNYSPRDVIENLKRRINGQAFVEMQPWYDGFAGIIEAKVGKKGLEGG-YSCRGLIERIDDTTVEITELQVRKWTQEYKQFLESLLPGAEDLKAKAGAGKKGEKDKAAKDKTPVRNIKDFRENHTDTTVHFTVTMAVEDLDAIDKGDG-LHKFFKLESSVTTTNMVLFDQDGQLTKYESPQHIMEDFFVLRTEYYDRRKTALLNKMQSEWSKLDNKVRFILAVVEGRLKVSNRKKTELLAELKREGYDLFLPAAAKGRVAGGEADGEEGEEEDDRDQ-----------LSKGYDYLLGMKLWSLTLERVGLLENELANKTADMTALKATTPSEIWLRDLDALGDI 333
            VPNYSPRDV+ENL+RRI GQ  VEMQPWY GF G I  K G  G +G  ++  G++ER  D T+EITEL V+KWTQ+YK FLES          KA A              P  +IKDFRENHTDTTVHFT+TM   DLDAI++  G L KFFKLE+++  TNM LFD  G + +YESP  IME+F+ LR  +Y  RK  LL +MQ EW +LDNKVRF++AVV+G+L+V NRKK+ELLA+L+ +G+D  LP +A   V G +A                        L+KGYDYLLG+KLW+LT E V  L  ELA K  +M  L+A   S++WLRDLDA+G++
Sbjct:  788 VPNYSPRDVMENLRRRIRGQPMVEMQPWYRGFVGTIARKAG--GAKGSSFTVEGIVERTGDETLEITELPVKKWTQDYKAFLESP--------TKAAA-------------KPRFHIKDFRENHTDTTVHFTITMDKSDLDAIEQQPGGLSKFFKLETTLAETNMTLFDNTGMIARYESPLQIMEEFYDLRLRHYGMRKEHLLARMQKEWMRLDNKVRFVVAVVQGKLEVRNRKKSELLAQLRADGFDPLLPESAAKSV-GSKAKXXXXXXXXXXXXXXXXXXXXXXALAKGYDYLLGLKLWTLTKEVVAKLLAELAAKKQEMEELRAMELSDLWLRDLDAVGEV 1108          
BLAST of mRNA_S-dermatodea_contig967.17677.1 vs. uniprot
Match: W7TC60_9STRA (DNA topoisomerase 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TC60_9STRA)

HSP 1 Score: 303 bits (775), Expect = 1.820e-87
Identity = 166/332 (50.00%), Postives = 221/332 (66.57%), Query Frame = 0
Query:    2 VPNYSPRDVIENLKRRINGQAFVEMQPWYDGFAGIIEAKVGKKGLEGGYSCRGLIERIDDTTVEITELQVRKWTQEYKQFLESLLPGAEDLKAKAGAGKKGEKDKAAKDKTPVRNIKDFRENHTDTTVHFTVTM---AVEDLDAIDKGDGLHKFFKLESSVTTTNMVLFDQDGQLTKYESPQHIMEDFFVLRTEYYDRRKTALLNKMQSEWSKLDNKVRFILAVVEGRLKVSNRKKTELLAELKREGYDLFLPAAAKGRVAGGEADGEEGEEEDDRDQLSKGYDYLLGMKLWSLTLERVGLLENELANKTADMTALKATTPSEIWLRDLDAL 330
            VPNY+PRD++ N++R + G+   EM PWY GF G +EAK G++   G Y+  G + R+DD TVE+TEL V+KWTQ+YKQFLES+  GA D K   GA                  IKD +E HTDT+V+F +T+   A  +L   D+   L K  KLESS+TT+NM LFD +G + KYE+P  ++ +F+ LR   Y++R+ ALL +++ EW ++DNKVRFIL+VV+GRL VSNRKK ELL EL REGY+LF P A       G  D EEGE      +L KGYDYLL MKLWSLTLERV  L  +LA K A++ AL+ T+ +++WL+D+DAL
Sbjct:  864 VPNYNPRDIMANIRRLLRGEEPEEMHPWYRGFTGTVEAKGGREA--GSYAVLGTVRRVDDVTVEVTELPVKKWTQDYKQFLESMTVGASDEK---GAF-----------------IKDLKERHTDTSVYFVITLSETAAPELLVDDQA--LFKRLKLESSITTSNMHLFDAEGHIVKYETPLAVLREFYPLRLSLYEKRRAALLQRLEREWRRMDNKVRFILSVVDGRLVVSNRKKAELLQELAREGYELFAPGA-------GGYDEEEGE---GGGELGKGYDYLLSMKLWSLTLERVEDLRGQLAQKAAELEALRGTSAADLWLQDMDAL 1161          
BLAST of mRNA_S-dermatodea_contig967.17677.1 vs. uniprot
Match: A0A7S3XNX1_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNX1_HETAK)

HSP 1 Score: 275 bits (703), Expect = 6.290e-81
Identity = 159/340 (46.76%), Postives = 212/340 (62.35%), Query Frame = 0
Query:    2 VPNYSPRDVIENLKRRINGQAFVEMQPWYDGFAGIIEAKVGKKGLEGGYSCRGLIERIDDTTVEITELQVRKWTQEYKQFLESLLPGAEDLKAKAGAGKKGEKDKAAKDKTPVRNIKDFRENHTDTTVHFTVTMAVEDLDAID-KGDGLHKFFKLESSVTTTNMVLFDQDGQLTKYESPQHIMEDFFVLRTEYYDRRKTALLNKMQSEWSKLDNKVRFILAVVEGRLKVSNRKKTELLAELKREGYDLFLPAAAKGRVAG---GEADGEEGEEEDDRDQLSKGYDYLLGMKLWSLTLERVGLLENELANKTADMTALKATTPSEIWLRDLDALGDILDEI 337
            VP Y PRDVI NL+R +  +A   M PW++GFAG +   V      G Y  +G++E +DD+T+ I+EL VRKWTQ+YK FLESLLPG        GAG  G              IK F+ENHTDTTV FTV +    L+ +  +  GL K FK+E SV+T+NM LF+++G +  Y +P+ IME F+  R + Y+ RK  L++K+  E+ KLDNKVRFILAVVEGRL VSNR++ ELL EL  EGY+LF   A          G AD  + ++  D   L++GYDYLL MKLWSLT+E+V  L  E   K A++  L+AT   ++WL DLDA+ + L E+
Sbjct:  384 VPTYDPRDVIANLRRLVKCEAMEPMHPWFNGFAGEL---VPNAKTPGSYKVKGILEVVDDSTILISELPVRKWTQDYKVFLESLLPGG------TGAGADG-------------IIKGFKENHTDTTVAFTVNLDPTVLNRLRLEPGGLEKKFKIEGSVSTSNMTLFNKEGMIETYATPEAIMEVFYEARIQGYEDRKNYLVDKLNKEFRKLDNKVRFILAVVEGRLVVSNRRRAELLRELADEGYELFDGGAXXXXXXXXXXGAADAADADDPSDLGALARGYDYLLSMKLWSLTMEKVNALRAEREAKNAELRELEATPSFQLWLNDLDAIEEALGEL 701          
BLAST of mRNA_S-dermatodea_contig967.17677.1 vs. uniprot
Match: A0A7R9ZGL7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZGL7_9STRA)

HSP 1 Score: 274 bits (700), Expect = 2.290e-78
Identity = 155/339 (45.72%), Postives = 212/339 (62.54%), Query Frame = 0
Query:    2 VPNYSPRDVIENLKRRINGQAFVEMQPWYDGFAGIIEAKVGKKGLEGGYSCRGLIERIDDTTVEITELQVRKWTQEYKQFLESLLPGAEDLKAKAGAGKKGEKDKAAKDKTPVRNIKDFRENHTDTTVHFTVTMAVEDLDAIDKG-DGLHKFFKLESSVTTTNMVLFDQDGQLTKYESPQHIMEDFFVLRTEYYDRRKTALLNKMQSEWSKLDNKVRFILAVVEGRLKVSNRKKTELLAELKREGYDLFLPAAAKGRVAGGEADGEEGEEEDDR---DQLSKGYDYLLGMKLWSLTLERVGLLENELANKTADMTALKATTPSEIWLRDLDALGDILDE 336
            VPN+ PR +IEN++R ING+   +M P Y GF G +  + GKK   G YS +G IER +DTT+ ITEL ++KWTQ+YK FLE LL                   K  K+K+   +IKDF+ENHTDTTV FT+T   E +D+ +KG DGL+  FKL  S++T+NM LFD  G++ KY SP+ I++ F+ LR ++Y +RK  LL  ++ E   L NK RF+  V  G L VSNRK+ ++LA+L+  GY+ F       +    ++DG+E +EED+     +L+KGYDYLLGMK+WSLT E+   L  EL  K   +  L+AT PS IW  DLD + D LDE
Sbjct:  462 VPNFDPRIIIENIRRLINGEDMEKMSPHYHGFTGEVVEETGKKA--GSYSVKGRIERTNDTTLLITELPIKKWTQDYKVFLEGLLT------------------KDDKNKSAELDIKDFKENHTDTTVSFTITATKEKIDSFEKGKDGLYGKFKLGGSISTSNMNLFDDRGRIIKYSSPESILQTFYDLRLDFYCKRKEHLLKILRREMRMLSNKARFVEEVCSGDLVVSNRKRADILADLQERGYETFT------KDDDNKSDGDESDEEDENVSDAELAKGYDYLLGMKIWSLTYEKAEQLRRELEEKKQAVKDLEATAPSAIWENDLDDILDALDE 774          
BLAST of mRNA_S-dermatodea_contig967.17677.1 vs. uniprot
Match: A0A812R7V5_SYMMI (DNA topoisomerase 2 (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812R7V5_SYMMI)

HSP 1 Score: 271 bits (694), Expect = 4.640e-77
Identity = 157/338 (46.45%), Postives = 204/338 (60.36%), Query Frame = 0
Query:    2 VPNYSPRDVIENLKRRINGQAFVE-MQPWYDGFAGIIEAKVGKKGLEGGYSCRGLIERIDDTTVEITELQVRKWTQEYKQFLESLLPGAEDLKAKAGAGKKGEKDKAAKDKTPVRNIKDFRENHTDTTVHFTVTMAVEDLDAID-KGDGLHKFFKLESSVTTTNMVLFDQDGQLTKYESPQHIMEDFFVLRTEYYDRRKTALLNKMQSEWSKLDNKVRFILAVVEGRLKVSNRKKTELLAELKREGYDLFLPAAAKGRVAGG--EADGEEGEEEDDRDQLSKGYDYLLGMKLWSLTLERVGLLENELANKTADMTALKATTPSEIWLRDLDALGDILD 335
            VP+Y PR +I N++  I G+     MQPWY GF+G I AK GK      Y+  G+IE+ DD T+ I+EL V K T +YKQFLE+++ G                     D      IKD RENHTDT V FT+ +A E +D I+ +  GL K FKL+ S  T+NM +FD +G + K++  + +ME FF +R EYY++RKT L +K+  EW KLDNKVRFILAV+ G L VSNRKK ++LAEL  EGY  FLP    G+ A    E + E+  E+ + + L +GYDYLL MKLWSLTLE+V  L  E  NK   +  L A     +WL DLDAL D LD
Sbjct:  698 VPSYDPRQIIANIRSMIAGEDVENTMQPWYRGFSGEIRAKTGKDS--NNYTVSGIIEQTDDCTIVISELPVGKSTTDYKQFLETMIIGG------------------PMDSNGSGFIKDIRENHTDTKVFFTLNIAPEKIDEINHEPGGLQKKFKLDGSCATSNMHMFDMEGHIQKFDRVEEVMEAFFDVRLEYYEKRKTHLASKLSEEWEKLDNKVRFILAVIHGELVVSNRKKADILAELFEEGYKTFLPVKKIGQAAASPSEEESEDSPEDTEPNNLDRGYDYLLSMKLWSLTLEKVQELCKERDNKRELLDTLLAKAAHHLWLEDLDALEDALD 1015          
BLAST of mRNA_S-dermatodea_contig967.17677.1 vs. uniprot
Match: A0A7S3XY17_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY17_HETAK)

HSP 1 Score: 262 bits (670), Expect = 5.000e-77
Identity = 151/339 (44.54%), Postives = 209/339 (61.65%), Query Frame = 0
Query:    2 VPNYSPRDVIENLKRRINGQAFVEMQPWYDGFAGIIEAKVGKKGLEGGYSCRGLIERIDDTTVEITELQVRKWTQEYKQFLESLLPGAEDLKAKAGAGKKGEKDKAAKDKTPVRNIKDFRENHTDTTVHFTVTMAVEDL-DAIDKGDGLHKFFKLESSVTTTNMVLFDQDGQLTKYESPQHIMEDFFVLRTEYYDRRKTALLNKMQSEWSKLDNKVRFILAVVEGRLKVSNRKKTELLAELKREGYDLFLPAAAKGRVAGGEADGEEGEEEDDR--DQLSKGYDYLLGMKLWSLTLERVGLLENELANKTADMTALKATTPSEIWLRDLDALGDILDEI 337
            VP Y+PRD+IENLKRRING+    ++PWY GF G    KV K    G Y   G  + ++D T+ ITEL VR WTQ YKQFLE                     DK   +K P   + DF ENHTDTTV FTVT     L DA +   GLHKFFKLES+V  +NM LF+++ ++ KY+S   +ME FF LR E+Y RRK  +L  M+ ++  LDNKV+F+LAV++G++K++NRKK +++ +L++ G+D+F+      R+        E EE  D   D++ KGY+YL+ MKLWSLTLE+V  L  + A K   +  L+AT   +IW+ DLD + +I+DE+
Sbjct:  315 VPCYNPRDIIENLKRRINGEPMKPLKPWYRGFNG----KVAKGKGPGKYVTVGTAKVLNDKTIHITELPVRVWTQNYKQFLE---------------------DKLRTEKNPQGTVLDFIENHTDTTVDFTVTFTDGALEDAENAPGGLHKFFKLESAVGCSNMHLFNEESKILKYDSVLDVMEAFFHLRLEFYRRRKAHMLASMELDFRVLDNKVKFVLAVLDGKMKINNRKKKQIITDLRKLGFDMFVGENKGMRLL-------EIEETTDARMDEMEKGYNYLMSMKLWSLTLEKVEKLREQQAEKRQAIAELRATAEEQIWVNDLDRVEEIIDEL 621          
BLAST of mRNA_S-dermatodea_contig967.17677.1 vs. uniprot
Match: A0A1Z5J9F6_FISSO (DNA topoisomerase 2 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J9F6_FISSO)

HSP 1 Score: 272 bits (695), Expect = 9.300e-77
Identity = 177/385 (45.97%), Postives = 232/385 (60.26%), Query Frame = 0
Query:    2 VPNYSPRDVIENLKRRINGQAFVEMQPWYDGFAGIIEAKVGKKGLEGGYSCRGLIERIDDTTVEITELQVRKWTQEYKQFLESLLPGAEDLKAKAGAGKKGEKDKAAKDKTPVRNIKDFRENHTDTTVHFTVTM--AVEDLDAIDKGDGLHKFFKLESSVTTTNMVLFDQDGQLTKYESPQHIMEDFFVLRTEYYDRRKTALLNKMQSEWSKLDNKVRFILAVVEGRLKVSNRKKTELLAELKREGYDLFLPAAAKGRVAGGEADGEEGEEEDDRDQLSKGYDYLLGMKLWSLTLERVGLLENELANKTADMTALKATTPSEIWLRDLDALGDILDE----IAQINAKQDVEDAKQRK---NAGKKKGGRAKGRGNQDE-DSDFE 376
            V NY+PRD+I+NL+R I G+   EM P+Y GF+G    ++  KG  G Y  RG IERIDD T+ ITEL V+KWTQ+YK F+E LL G                      KTP   IKDFRENHTDTTV FT+    A+ D    +KG GL   FKL +S++T NM LFD++G++TKYESP  IM  F  +R EYY++RK  L++K++ E   L NK RF+  V  G+L VSNRK+ ++L  LK  GYDL L  AA       ++  EE EEE    +L+KGY+YLLGMK+WSLT E+   L  +LA KT ++  LK T P++IW  DLDA+   LDE    I++  A +     K R+    A KK   +AKG   +D+ DSD E
Sbjct:  885 VANYNPRDIIDNLRRYIAGEEMEEMAPFYSGFSG----EIAPKGTNG-YEVRGKIERIDDATILITELPVKKWTQDYKVFVEGLLTGD--------------------GKTPAE-IKDFRENHTDTTVSFTIIAEKAMIDKWESEKG-GLMNKFKLTASLSTNNMNLFDENGKITKYESPLSIMRAFVPIRLEYYEKRKENLVSKLEEERKILSNKARFVEEVCSGKLVVSNRKRNDILNNLKASGYDLVLKYAAPKDDE--DSQDEEVEEESTVGELAKGYEYLLGMKIWSLTYEKAEALRAQLAEKTQELEILKKTAPAQIWSNDLDAIEAALDERDGEISKALATEKKAQQKSRQIQAKAVKKSAAKAKGVSKKDDWDSDME 1240          
BLAST of mRNA_S-dermatodea_contig967.17677.1 vs. uniprot
Match: A0A421GVE2_9STRA (DNA topoisomerase 2 n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GVE2_9STRA)

HSP 1 Score: 271 bits (694), Expect = 1.370e-76
Identity = 156/359 (43.45%), Postives = 215/359 (59.89%), Query Frame = 0
Query:    2 VPNYSPRDVIENLKRRINGQAFVEMQPWYDGFAGIIEAKVGKKGLEGG-YSCRGLIERIDDTTVEITELQVRKWTQEYKQFLESLLPGAEDLKAKAGAGKKGEKDKAAKDKTPVRNIKDFRENHTDTTVHFTVTMAVEDLDAIDKGDG-LHKFFKLESSVTTTNMVLFDQDGQLTKYESPQHIMEDFFVLRTEYYDRRKTALLNKMQSEWSKLDNKVRFILAVVEGRLKVSNRKKTELLAELKREGYDLFLPAAAKGRVAGGEADGEEGEEEDDRDQLSKGYDYLLGMKLWSLTLERVGLLENELANKTADMTALKATTPSEIWLRDLDALGDILDEIAQINAKQDVEDAKQRKNAGKK 358
            VPNY+P D+I+ L+R +NG+    + PWY GF G I  K   +G +   Y  +GL E IDD+T+ I+EL V+ WTQ YKQFLE LL                              IKDF+ENHTD  V F +T+  + L  I K  G + K FKLESS++T+NM LFD  G + KYESP+ +ME+F+ LR EYYDRRK A+L K+Q +   L NK RF+L+VVEG+L V+NRK+ +LL EL  EGYD  LP A+K + +    +  E + ED+     +GYDYLL MK+WSLT ERV  L  EL ++  +   L++ T  ++W  +LDAL  +L E  +   ++ +    ++KN GKK
Sbjct:  943 VPNYNPLDIIKGLRRMLNGEEVTPLAPWYRGFTGHIIEKTNSRGTDSSNYLVQGLFEVIDDSTLVISELPVKSWTQTYKQFLEGLLDAG--------------------------TIKDFKENHTDVKVLFKITLDPKTLSDIAKAPGGIVKKFKLESSLSTSNMHLFDAAGHIKKYESPREVMEEFYGLRLEYYDRRKRAMLQKLQDQIKLLSNKARFVLSVVEGKLTVNNRKRQDLLEELIAEGYDQILPKASK-KKSDSNTEANESDNEDNAADAGRGYDYLLSMKIWSLTKERVDKLRAELQDREQEYNVLESRTIQDLWTTNLDALEQMLVE-TEAERERVLAHTPKKKNRGKK 1273          
BLAST of mRNA_S-dermatodea_contig967.17677.1 vs. uniprot
Match: A0A7S3FNV5_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3FNV5_9CHLO)

HSP 1 Score: 256 bits (655), Expect = 2.580e-76
Identity = 153/374 (40.91%), Postives = 220/374 (58.82%), Query Frame = 0
Query:    2 VPNYSPRDVIENLKRRINGQAFVEMQPWYDGFAGIIEAKVGKKGLEG---GYSCRGLIERIDDTTVEITELQVRKWTQEYKQFLESLLPGAEDLKAKAGAGKKGEKDKAAKDKTPVRNIKDFRENHTDTTVHFTVTMAVEDLDAIDKGDGLHKFFKLESSVTTTNMVLFDQDGQLTKYESPQHIMEDFFVLRTEYYDRRKTALLNKMQSEWSKLDNKVRFILAVVEGRLKVSNRKKTELLAELKREGYDLFLPAAAKGRVAGGEADGEEGEEEDDRDQLSK-------GYDYLLGMKLWSLTLERVGLLENELANKTADMTALKATTPSEIWLRDLDALGDILD--EIAQINAKQDVEDAKQRKNAGKK-KGGR 362
            +PNY+PRDV EN++R I GQ    M PWY GF G I+  VG+         +S  G +  ID+ T+EI EL +RKWTQ+YK+FLE L+   +                  KD+ P   I D++E HTD+TVHF VTM  ++L+   +  G+HK FKL  +++TTNM LFD DG + +Y SP+ I+++F   R E+Y RRK A+L   + +  +LDNKVRFIL VVEG L +SNRKK ++  +L   G+D    +A +G+  G   + E+ + E+     SK        YDYLL M LWSL+LE+V  L+NE   K   +  +K T P ++WL D+D L + L+  E+ +   K ++E+ ++R   GK  KGGR
Sbjct:  111 IPNYNPRDVAENVRRYIRGQEMQPMVPWYKGFDGQIQRVVGRNAAADKGESFSVSGAVNIIDERTIEIVELPLRKWTQDYKEFLEGLMKPVK------------------KDQAPF--ITDYKEYHTDSTVHFIVTMPEQNLELAQQ-QGIHKTFKLLGTISTTNMHLFDSDGLIRRYSSPEEIVQEFCGKRLEFYQRRKDAMLADEEEQMRRLDNKVRFILMVVEGELVISNRKKADIEQDLDALGFDRLKKSAKRGK--GSSQNDEDDDLEEGGSSKSKQPAGQKVSYDYLLSMPLWSLSLEKVQELQNEYEGKRDCVAKIKGTDPKDMWLSDIDHLEETLEVCEVEEAKLKAELEEQQERARTGKAAKGGR 461          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig967.17677.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFS2_9PHAE1.660e-17166.82DNA topoisomerase 2 n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A835YRC0_9STRA2.160e-9051.30DNA topoisomerase 2 n=1 Tax=Tribonema minus TaxID=... [more]
W7TC60_9STRA1.820e-8750.00DNA topoisomerase 2 n=2 Tax=Monodopsidaceae TaxID=... [more]
A0A7S3XNX1_HETAK6.290e-8146.76Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7R9ZGL7_9STRA2.290e-7845.72Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A812R7V5_SYMMI4.640e-7746.45DNA topoisomerase 2 (Fragment) n=1 Tax=Symbiodiniu... [more]
A0A7S3XY17_HETAK5.000e-7744.54Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A1Z5J9F6_FISSO9.300e-7745.97DNA topoisomerase 2 n=2 Tax=Fistulifera solaris Ta... [more]
A0A421GVE2_9STRA1.370e-7643.45DNA topoisomerase 2 n=4 Tax=Phytophthora kernoviae... [more]
A0A7S3FNV5_9CHLO2.580e-7640.91Hypothetical protein (Fragment) n=1 Tax=Chloropico... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002205DNA topoisomerase, type IIA, subunit A/C-terminalSMARTSM00434topIV4coord: 2..325
e-value: 1.0E-11
score: -46.5
IPR002205DNA topoisomerase, type IIA, subunit A/C-terminalPFAMPF00521DNA_topoisoIVcoord: 1..328
e-value: 1.7E-47
score: 162.3
IPR013757Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamilyGENE3D1.10.268.10coord: 178..345
e-value: 4.2E-45
score: 155.2
NoneNo IPR availableGENE3D3.30.1360.40coord: 33..162
e-value: 1.1E-25
score: 91.6
NoneNo IPR availablePANTHERPTHR10169:SF38DNA TOPOISOMERASE 2coord: 2..407
NoneNo IPR availablePANTHERPTHR10169DNA TOPOISOMERASE/GYRASEcoord: 2..407
IPR013760DNA topoisomerase, type IIA-like domain superfamilySUPERFAMILY56719Type II DNA topoisomerasecoord: 2..334

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig967contigS-dermatodea_contig967:65..10618 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig967.17677.1mRNA_S-dermatodea_contig967.17677.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig967 65..10618 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig967.17677.1 ID=prot_S-dermatodea_contig967.17677.1|Name=mRNA_S-dermatodea_contig967.17677.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=481bp
QVPNYSPRDVIENLKRRINGQAFVEMQPWYDGFAGIIEAKVGKKGLEGGY
SCRGLIERIDDTTVEITELQVRKWTQEYKQFLESLLPGAEDLKAKAGAGK
KGEKDKAAKDKTPVRNIKDFRENHTDTTVHFTVTMAVEDLDAIDKGDGLH
KFFKLESSVTTTNMVLFDQDGQLTKYESPQHIMEDFFVLRTEYYDRRKTA
LLNKMQSEWSKLDNKVRFILAVVEGRLKVSNRKKTELLAELKREGYDLFL
PAAAKGRVAGGEADGEEGEEEDDRDQLSKGYDYLLGMKLWSLTLERVGLL
ENELANKTADMTALKATTPSEIWLRDLDALGDILDEIAQINAKQDVEDAK
QRKNAGKKKGGRAKGRGNQDEDSDFEDGPSKKTSKAKGKSHPPPPPPSRA
IVPELVLSAGGGKVSPAFAEAEASGKLVTDVKPAQEARDMPVEGDQPADG
GTNDRDEDIRGSDSELPVRAMANMSLAARLK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002205Topo_IIA_A/C
IPR013757Topo_IIA_A_a_sf
IPR013760Topo_IIA-like_dom_sf