prot_S-dermatodea_contig96445.17655.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig96445.17655.1
Unique Nameprot_S-dermatodea_contig96445.17655.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length173
Homology
BLAST of mRNA_S-dermatodea_contig96445.17655.1 vs. uniprot
Match: A0A8F0F770_9PHAE (50S ribosomal protein L5, chloroplastic n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F770_9PHAE)

HSP 1 Score: 274 bits (700), Expect = 8.940e-92
Identity = 138/173 (79.77%), Postives = 154/173 (89.02%), Query Frame = 0
Query:    1 MKNSNEIKSKSLKLIYKESIFPSLIEQFGYTNIHQVPKLIKIQINQGLGINGQNNKYLQNSIDDIRLITGQQPILTKAKKSIAGFKVREEMTLGVTVTLRNTKMYAFLEKLVHLVLPRIRDFRGLSSKGFDSKGNYNFGIREQLIFPEISYEKVDQIRGFNISIETKKKTKTE 173
            MK+ ++IK K+LK  YK+SIFP+L+EQF Y N HQVPKL+KIQIN+GLGI GQNNK LQ SID+IRLITGQQPILTKAKKSIAGFKVREEM LGVTVTLRN KMY FLEKLVHLVLPRIRDFRGLSSKGFD +GNYNFG++EQL+FPEI+YE VDQI+GFNISI T  KTK E
Sbjct:    1 MKSVSKIKVKNLKRFYKDSIFPNLLEQFQYNNNHQVPKLVKIQINRGLGIEGQNNKTLQKSIDEIRLITGQQPILTKAKKSIAGFKVREEMNLGVTVTLRNNKMYTFLEKLVHLVLPRIRDFRGLSSKGFDREGNYNFGLQEQLVFPEINYENVDQIKGFNISIVTTAKTKNE 173          
BLAST of mRNA_S-dermatodea_contig96445.17655.1 vs. uniprot
Match: A0A0R6LUT7_UNDPI (50S ribosomal protein L5, chloroplastic n=24 Tax=Phaeophyceae TaxID=2870 RepID=A0A0R6LUT7_UNDPI)

HSP 1 Score: 268 bits (684), Expect = 2.450e-89
Identity = 129/173 (74.57%), Postives = 154/173 (89.02%), Query Frame = 0
Query:    1 MKNSNEIKSKSLKLIYKESIFPSLIEQFGYTNIHQVPKLIKIQINQGLGINGQNNKYLQNSIDDIRLITGQQPILTKAKKSIAGFKVREEMTLGVTVTLRNTKMYAFLEKLVHLVLPRIRDFRGLSSKGFDSKGNYNFGIREQLIFPEISYEKVDQIRGFNISIETKKKTKTE 173
            M N NEI++K+LK +YK+ +FP+L++QF Y N HQVPKL+KIQ+N+GLG++GQNNK LQ S+D++RLITGQQPILTKAKKSIAGFKVREEM LG+TVTLR+ KMYAFLEKL+HLVLPRIRDFRGLS KGFD  GNYNFG++EQL+FPEISYE VDQI+GFNISI T  +TK E
Sbjct:    1 MINDNEIEAKNLKFLYKDLVFPNLVKQFNYKNNHQVPKLVKIQLNRGLGVDGQNNKTLQKSVDEMRLITGQQPILTKAKKSIAGFKVREEMVLGITVTLRSKKMYAFLEKLIHLVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGFNISIVTTAQTKIE 173          
BLAST of mRNA_S-dermatodea_contig96445.17655.1 vs. uniprot
Match: A0A8E6D6M4_9PHAE (50S ribosomal protein L5, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D6M4_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 1.410e-88
Identity = 129/173 (74.57%), Postives = 154/173 (89.02%), Query Frame = 0
Query:    1 MKNSNEIKSKSLKLIYKESIFPSLIEQFGYTNIHQVPKLIKIQINQGLGINGQNNKYLQNSIDDIRLITGQQPILTKAKKSIAGFKVREEMTLGVTVTLRNTKMYAFLEKLVHLVLPRIRDFRGLSSKGFDSKGNYNFGIREQLIFPEISYEKVDQIRGFNISIETKKKTKTE 173
            M+N+NE  SK+LK +YK SIFP+LI+QF YTN H+VPKL+KIQ+N+GLG++ QN+K LQ S+D+IRLITGQQPI+TKAKKSIAGFKVRE+M LGVTVTLRN+KMY FLEKL+HLVLPRIRDFRGLS KGFD +GNYNFG+REQL FPEI+YE +DQ+RGFNISI T  KT+ E
Sbjct:    1 MENTNETYSKNLKALYKSSIFPTLIKQFEYTNNHEVPKLVKIQVNRGLGLDAQNSKILQKSVDEIRLITGQQPIITKAKKSIAGFKVREDMILGVTVTLRNSKMYIFLEKLIHLVLPRIRDFRGLSLKGFDREGNYNFGLREQLAFPEINYESIDQLRGFNISIVTTAKTRNE 173          
BLAST of mRNA_S-dermatodea_contig96445.17655.1 vs. uniprot
Match: A0A1I9LVU6_9PHAE (50S ribosomal protein L5, chloroplastic n=14 Tax=Phaeophyceae TaxID=2870 RepID=A0A1I9LVU6_9PHAE)

HSP 1 Score: 263 bits (672), Expect = 1.640e-87
Identity = 130/173 (75.14%), Postives = 153/173 (88.44%), Query Frame = 0
Query:    1 MKNSNEIKSKSLKLIYKESIFPSLIEQFGYTNIHQVPKLIKIQINQGLGINGQNNKYLQNSIDDIRLITGQQPILTKAKKSIAGFKVREEMTLGVTVTLRNTKMYAFLEKLVHLVLPRIRDFRGLSSKGFDSKGNYNFGIREQLIFPEISYEKVDQIRGFNISIETKKKTKTE 173
            M N+NEI +K+L+L+YK+ I  +LI++F Y N HQVPKL+KIQ+N+GLG+ GQNNK LQ SI++IRLI+GQQPILTKAKKSIAGFKVREEMTLG+TVTLR+TKMYAFLEKL+HLVLPRIRDFRGLS KGFD  GNYNFG++EQL+FPEISYE VDQI+G NISI T  KTK E
Sbjct:    1 MINNNEINTKNLRLLYKDLIVGNLIKEFDYKNNHQVPKLVKIQLNRGLGVEGQNNKTLQKSIEEIRLISGQQPILTKAKKSIAGFKVREEMTLGITVTLRSTKMYAFLEKLIHLVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGLNISIVTTAKTKNE 173          
BLAST of mRNA_S-dermatodea_contig96445.17655.1 vs. uniprot
Match: A0A2I4Q2J9_9PHAE (50S ribosomal protein L5, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2J9_9PHAE)

HSP 1 Score: 261 bits (667), Expect = 9.490e-87
Identity = 129/173 (74.57%), Postives = 150/173 (86.71%), Query Frame = 0
Query:    1 MKNSNEIKSKSLKLIYKESIFPSLIEQFGYTNIHQVPKLIKIQINQGLGINGQNNKYLQNSIDDIRLITGQQPILTKAKKSIAGFKVREEMTLGVTVTLRNTKMYAFLEKLVHLVLPRIRDFRGLSSKGFDSKGNYNFGIREQLIFPEISYEKVDQIRGFNISIETKKKTKTE 173
            M+N +EI+ ++LK +YK+SI P L EQF Y NIHQVPKL+KIQIN+GLG+ GQNNK LQ S+D+IRLITGQQP+LTKAKKSIAGFKVRE MTLG+TVTLR TKMY FLEKL+HLVLPRIRDFRGLS+K FD  GNY+FG++EQL+FPEISYE VDQIRG NISI T  KT+ E
Sbjct:    1 MRNHSEIQLQNLKNLYKKSIQPQLQEQFNYRNIHQVPKLVKIQINRGLGLEGQNNKLLQKSVDEIRLITGQQPVLTKAKKSIAGFKVREHMTLGITVTLRQTKMYTFLEKLIHLVLPRIRDFRGLSTKNFDRNGNYHFGLQEQLVFPEISYENVDQIRGLNISIVTTAKTQAE 173          
BLAST of mRNA_S-dermatodea_contig96445.17655.1 vs. uniprot
Match: A0A141BSM9_9PHAE (50S ribosomal protein L5, chloroplastic n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSM9_9PHAE)

HSP 1 Score: 259 bits (661), Expect = 7.770e-86
Identity = 130/173 (75.14%), Postives = 149/173 (86.13%), Query Frame = 0
Query:    1 MKNSNEIKSKSLKLIYKESIFPSLIEQFGYTNIHQVPKLIKIQINQGLGINGQNNKYLQNSIDDIRLITGQQPILTKAKKSIAGFKVREEMTLGVTVTLRNTKMYAFLEKLVHLVLPRIRDFRGLSSKGFDSKGNYNFGIREQLIFPEISYEKVDQIRGFNISIETKKKTKTE 173
            M N N IK+K+LK +YK+ IF +LI+QF Y N HQVPKL+KIQIN+GLG +GQNNK LQ SI++IR+ITGQ PI+TKAK SIAGFKVREEM LGVTVTLRN KMYAFLEKL+HLVLPRIRDFRGLS KGFD  GNYNFG++EQL+FPEI+YE VDQIRG NISI T  KTK+E
Sbjct:    1 MINHNGIKTKNLKFLYKDLIFHNLIKQFNYRNNHQVPKLVKIQINRGLGGDGQNNKILQKSIEEIRIITGQHPIITKAKNSIAGFKVREEMVLGVTVTLRNKKMYAFLEKLIHLVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEINYENVDQIRGLNISIVTTAKTKSE 173          
BLAST of mRNA_S-dermatodea_contig96445.17655.1 vs. uniprot
Match: A0A2R4QQ29_9PHAE (50S ribosomal protein L5, chloroplastic n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QQ29_9PHAE)

HSP 1 Score: 259 bits (661), Expect = 7.770e-86
Identity = 128/173 (73.99%), Postives = 151/173 (87.28%), Query Frame = 0
Query:    1 MKNSNEIKSKSLKLIYKESIFPSLIEQFGYTNIHQVPKLIKIQINQGLGINGQNNKYLQNSIDDIRLITGQQPILTKAKKSIAGFKVREEMTLGVTVTLRNTKMYAFLEKLVHLVLPRIRDFRGLSSKGFDSKGNYNFGIREQLIFPEISYEKVDQIRGFNISIETKKKTKTE 173
            M  ++EIK K+LK++YK  IF +LI QF Y N HQVPKL+KIQ+N+GLG++GQNNK LQ SI++IRLITGQQPI+TKAKKSIAGFKVREEM LGVTVTLRN KMYAFLEKL+HLVLPRIRDFRGLS KGFD  GNYNFG++EQL+FPEISY+ VDQ++G NISI T  +TK+E
Sbjct:    1 MITNSEIKVKNLKVLYKTLIFKNLINQFNYKNNHQVPKLVKIQLNRGLGVDGQNNKILQKSIEEIRLITGQQPIVTKAKKSIAGFKVREEMILGVTVTLRNKKMYAFLEKLIHLVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYDSVDQVKGLNISIVTTAQTKSE 173          
BLAST of mRNA_S-dermatodea_contig96445.17655.1 vs. uniprot
Match: A0A8E5BGR0_9PHAE (50S ribosomal protein L5, chloroplastic n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E5BGR0_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 3.690e-77
Identity = 118/173 (68.21%), Postives = 146/173 (84.39%), Query Frame = 0
Query:    1 MKNSNEIKSKSLKLIYKESIFPSLIEQFGYTNIHQVPKLIKIQINQGLGINGQNNKYLQNSIDDIRLITGQQPILTKAKKSIAGFKVREEMTLGVTVTLRNTKMYAFLEKLVHLVLPRIRDFRGLSSKGFDSKGNYNFGIREQLIFPEISYEKVDQIRGFNISIETKKKTKTE 173
            MKN+N + SK+LKL+YK+SI  +L  +F Y NIH+VPK+IKIQ+N GLGI  QN K L+ +I+++RLITGQQP+LTKAKKSIAGFK+RE+M LG+TVTLRN KMY FL KL+HLVLPRIRDFRGLS KGFD KGNYNFG++EQL+FPEI+YE V +I GFNIS+ T  +T+ E
Sbjct:    1 MKNNN-LYSKNLKLLYKDSITLNLKTKFDYKNIHEVPKIIKIQLNCGLGIESQNKKILERAIEEVRLITGQQPVLTKAKKSIAGFKIREDMILGLTVTLRNKKMYEFLTKLIHLVLPRIRDFRGLSIKGFDRKGNYNFGLKEQLVFPEINYEDVKKINGFNISLVTTAQTEVE 172          
BLAST of mRNA_S-dermatodea_contig96445.17655.1 vs. uniprot
Match: A0A7S6ZPC4_9STRA (50S ribosomal protein L5, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6ZPC4_9STRA)

HSP 1 Score: 227 bits (578), Expect = 3.680e-73
Identity = 109/146 (74.66%), Postives = 128/146 (87.67%), Query Frame = 0
Query:   28 FGYTNIHQVPKLIKIQINQGLGINGQNNKYLQNSIDDIRLITGQQPILTKAKKSIAGFKVREEMTLGVTVTLRNTKMYAFLEKLVHLVLPRIRDFRGLSSKGFDSKGNYNFGIREQLIFPEISYEKVDQIRGFNISIETKKKTKTE 173
            F Y NIHQVPKL+KIQIN+GLGI GQNN  LQ S+++IR+++GQQPI+TKAKKSIAGFK+REEM LGVTVTLR  KMY FLEKL+HLVLPR+RDFRGLS+KGFD  GNYNFG++EQL+FPEI+Y+ VD+ RGFNISI T  KTK E
Sbjct:   31 FQYKNIHQVPKLVKIQINRGLGIEGQNNSILQKSVNEIRIVSGQQPIITKAKKSIAGFKIREEMNLGVTVTLRKLKMYDFLEKLIHLVLPRVRDFRGLSTKGFDKFGNYNFGLQEQLVFPEINYDDVDKTRGFNISIVTTAKTKDE 176          
BLAST of mRNA_S-dermatodea_contig96445.17655.1 vs. uniprot
Match: B7T1X2_VAULI (50S ribosomal protein L5, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1X2_VAULI)

HSP 1 Score: 224 bits (572), Expect = 2.550e-72
Identity = 112/164 (68.29%), Postives = 135/164 (82.32%), Query Frame = 0
Query:   10 KSLKLIYKESIFPSLIEQFGYTNIHQVPKLIKIQINQGLGINGQNNKYLQNSIDDIRLITGQQPILTKAKKSIAGFKVREEMTLGVTVTLRNTKMYAFLEKLVHLVLPRIRDFRGLSSKGFDSKGNYNFGIREQLIFPEISYEKVDQIRGFNISIETKKKTKTE 173
            K + L+YKE+I  +L  +F ++N HQVPKLIKIQIN+GLGI+ QNN  L+ SI++ R ITGQQPI+TKAKKSIA FKVRE M LGVTVTLR  KMY+FLEKL+HLVLPRIRDFRGLS KGFD  GN+NFGIREQL+FPEI+Y+ ++Q RG NI+I +  KTK E
Sbjct:    8 KPINLMYKENIIDNLTTKFKFSNKHQVPKLIKIQINRGLGIDAQNNSLLKKSIEEFRTITGQQPIVTKAKKSIATFKVRETMNLGVTVTLRGNKMYSFLEKLIHLVLPRIRDFRGLSIKGFDKNGNFNFGIREQLVFPEINYDIINQTRGLNITIVSTAKTKDE 171          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig96445.17655.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0F770_9PHAE8.940e-9279.7750S ribosomal protein L5, chloroplastic n=1 Tax=Pr... [more]
A0A0R6LUT7_UNDPI2.450e-8974.5750S ribosomal protein L5, chloroplastic n=24 Tax=P... [more]
A0A8E6D6M4_9PHAE1.410e-8874.5750S ribosomal protein L5, chloroplastic n=1 Tax=Is... [more]
A0A1I9LVU6_9PHAE1.640e-8775.1450S ribosomal protein L5, chloroplastic n=14 Tax=P... [more]
A0A2I4Q2J9_9PHAE9.490e-8774.5750S ribosomal protein L5, chloroplastic n=1 Tax=Di... [more]
A0A141BSM9_9PHAE7.770e-8675.1450S ribosomal protein L5, chloroplastic n=14 Tax=S... [more]
A0A2R4QQ29_9PHAE7.770e-8673.9950S ribosomal protein L5, chloroplastic n=3 Tax=Fu... [more]
A0A8E5BGR0_9PHAE3.690e-7768.2150S ribosomal protein L5, chloroplastic n=1 Tax=Ph... [more]
A0A7S6ZPC4_9STRA3.680e-7374.6650S ribosomal protein L5, chloroplastic n=1 Tax=Sc... [more]
B7T1X2_VAULI2.550e-7268.2950S ribosomal protein L5, chloroplastic n=1 Tax=Va... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031309Ribosomal protein L5, C-terminalPFAMPF00673Ribosomal_L5_Ccoord: 93..172
e-value: 7.1E-32
score: 109.4
IPR022803Ribosomal protein L5 domain superfamilyGENE3D3.30.1440.10coord: 7..173
e-value: 3.8E-64
score: 217.5
IPR022803Ribosomal protein L5 domain superfamilySUPERFAMILY55282RL5-likecoord: 12..172
IPR031310Ribosomal protein L5, N-terminalPFAMPF00281Ribosomal_L5coord: 32..88
e-value: 2.6E-21
score: 75.7
IPR002132Ribosomal protein L5PIRSFPIRSF002161RPL5p_RPL5a_RPL11e_RPL5ocoord: 5..173
e-value: 2.6E-53
score: 178.2
IPR002132Ribosomal protein L5PANTHERPTHR1199460S RIBOSOMAL PROTEIN L11-RELATEDcoord: 15..171
NoneNo IPR availablePANTHERPTHR11994:SF454S RIBOSOMAL PROTEIN L7, MITOCHONDRIALcoord: 15..171
IPR020929Ribosomal protein L5, conserved sitePROSITEPS00358RIBOSOMAL_L5coord: 65..81
IPR020930Ribosomal protein L5, bacterial-typeHAMAPMF_01333_BRibosomal_L5_Bcoord: 9..173
score: 33.888

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig96445contigS-dermatodea_contig96445:1..519 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig96445.17655.1mRNA_S-dermatodea_contig96445.17655.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig96445 1..519 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig96445.17655.1 ID=prot_S-dermatodea_contig96445.17655.1|Name=mRNA_S-dermatodea_contig96445.17655.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=173bp
MKNSNEIKSKSLKLIYKESIFPSLIEQFGYTNIHQVPKLIKIQINQGLGI
NGQNNKYLQNSIDDIRLITGQQPILTKAKKSIAGFKVREEMTLGVTVTLR
NTKMYAFLEKLVHLVLPRIRDFRGLSSKGFDSKGNYNFGIREQLIFPEIS
YEKVDQIRGFNISIETKKKTKTE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031309Ribosomal_L5_C
IPR022803Ribosomal_L5_dom_sf
IPR031310Ribosomal_L5_N
IPR002132Ribosomal_L5
IPR020929Ribosomal_L5_CS
IPR020930Ribosomal_L5_bac-type