mRNA_S-dermatodea_contig963.17644.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig963.17644.1
Unique NamemRNA_S-dermatodea_contig963.17644.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig963.17644.1 vs. uniprot
Match: D8LSQ9_ECTSI (Similar to kinesin-C n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSQ9_ECTSI)

HSP 1 Score: 676 bits (1744), Expect = 5.010e-222
Identity = 353/449 (78.62%), Postives = 397/449 (88.42%), Query Frame = 1
Query:  160 QKLATELDAASKGWESCKAELAQARKEREALRQQMSAMGTMGEELQELRARAEEAKEVQTQLEVANGENVRLEGLYHAEQVLRKKYWNAMEDMKGKIRVFARCRPFAQYELSQDCKRAVRQLDEATLEVDGHHGVKQFVFDSVFSEDNTQEDIFEDTKNLVQSALDGFNVCVFAYGQTGSGKTWTMTGGTGELRGLTPRVIEEIFASIDKTKGSTEVKVSCYFIELYLDQLRDLLFAMDRPNDAPPKLEVHLDANKMVVVKNVVIKARLKRDSNDLTSVFTQGNRHRKVGGTKMNAESSRSHSVFSILLEVYNRTTKKTTTGKLSLVDLAGSERADKTGATSDRLKEAQSINKSLSALGDVISALSKNEKFIPYRNNKLTQVMQDSLGGNAKTLMFVNISPADYNQEETATALTYATRVKLITNTAEKKRDGEEVSRLKEIIRRLQAGE 1506
            +KL  EL+AA+KGWESCK +LAQ +KER+ LRQQ+S+MGTMGEE+Q LR RAE A  ++++L  A     RLE L+  EQ LRKKYWN MEDMKGKIRVFARCRP AQYEL+QDCKRAVR +D++T+EVDGHHG KQFVFDSVFSE++ Q  IFEDT+NLVQSALDGFNVCVFAYGQTGSGKTWTMTGG G+ RGLTPR IEE+F +I+K KG+ EVKVSCYFIELYLD LRDLLFAMD P   PP+LE+H+D+NKMVVVKNVV+K    RD++DL  +F  GN  RKVGGTKMNAESSRSHSVFS+LLEVYN+ +KKTTTGKLSLVDLAGSERADKTGAT+DRLKEAQSINKSLSALGDVISALS+NEKFIPYRNNKLTQVMQDSLGGNAKTLMFVNISPADYNQ+ET TALTYATRVKLITNTAEK++DGEEVSRLKE IRRL+AGE
Sbjct: 1582 EKLGAELEAAAKGWESCKNDLAQLKKERDDLRQQVSSMGTMGEEMQVLRTRAEAATRLESELXEATANTSRLEDLFQVEQSLRKKYWNMMEDMKGKIRVFARCRPLAQYELNQDCKRAVRFVDDSTVEVDGHHGAKQFVFDSVFSEEHGQAAIFEDTRNLVQSALDGFNVCVFAYGQTGSGKTWTMTGGKGDQRGLTPRAIEEVFGNIEKAKGALEVKVSCYFIELYLDNLRDLLFAMDHPTGTPPRLEIHMDSNKMVVVKNVVVKEA--RDASDLMHLFAAGNHQRKVGGTKMNAESSRSHSVFSVLLEVYNKASKKTTTGKLSLVDLAGSERADKTGATADRLKEAQSINKSLSALGDVISALSRNEKFIPYRNNKLTQVMQDSLGGNAKTLMFVNISPADYNQDETVTALTYATRVKLITNTAEKQQDGEEVSRLKETIRRLRAGE 2028          
BLAST of mRNA_S-dermatodea_contig963.17644.1 vs. uniprot
Match: A0A6V1MSS8_HETAK (Kinesin-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1MSS8_HETAK)

HSP 1 Score: 521 bits (1341), Expect = 1.170e-178
Identity = 284/461 (61.61%), Postives = 365/461 (79.18%), Query Frame = 1
Query:  127 KKMGDDSDRKQQKLATELDAASKGWESCKAELAQARKEREALRQQMSAMGTMGEELQELRARAEEAKEVQTQLEVANGENVRLEGLYHAEQVLRKKYWNAMEDMKGKIRVFARCRPFAQYELSQDCKRAVRQLDEATLEVDGHHGVKQFVFDSVFSEDNTQEDIFEDTKNLVQSALDGFNVCVFAYGQTGSGKTWTMTGGTGELRGLTPRVIEEIFASIDKTKGSTEVKVSCYFIELYLDQLRDLLFAMDRP--NDAPPKLEVHLDANKMVVVKNVVIKARLKRDSNDLTSVFTQGNRHRKVGGTKMNAESSRSHSVFSILLEVYNRTTKKTTTGKLSLVDLAGSERADKTGATSDRLKEAQSINKSLSALGDVISALSKNEKFIPYRNNKLTQVMQDSLGGNAKTLMFVNISPADYNQEETATALTYATRVKLITNTAEKKRDGEEVSRLKEIIRRLQAG 1503
            KK+G+++D+  +K AT+L+      E    EL +A++  + +++++++MGTMGEEL++LR R+ EA E++ QL+V   E   LE  Y  EQ LRKKYWN MEDMKGKIRV+ARCRP A+YEL + C++AVR +DE T+E++  HG KQFV+D+VFS  NTQED+FEDTKNL+QS LDG+NVC+FAYGQTGSGKT+TMTG +  + G+TPR I +++  I++   + +V VS YF+ELY D L DL +++D     + PPKL++ LDA KMV +KNV ++     D  +L S+F QGN +R VG T MNAESSRSHS+F+IL+E YN+TTKKT TGKLSLVDLAGSERADKTGAT+DRL+EAQ+INKSLSALGDVISALS N+KFIPYRNNKLTQ+MQDSLGGNAKTLMFVN+SPADYNQEE+ T+L YA RVKLITNTA+K  D EE+++LK IIR L+AG
Sbjct:   53 KKLGNEADKATRK-ATKLETEKGELEG---ELKEAKETIKDMKKKVASMGTMGEELEKLRERSAEADEMERQLKVNAAEVAELEQKYKDEQALRKKYWNMMEDMKGKIRVYARCRPMAKYELERGCQQAVRFVDETTIEINSAHGPKQFVYDAVFSPANTQEDVFEDTKNLMQSCLDGYNVCLFAYGQTGSGKTFTMTG-SDAMPGVTPRGIRQLYGLIEQNSANLDVTVSTYFVELYNDGLVDLYWSLDHDARREQPPKLDIKLDAKKMVFIKNVTLRTAASAD--ELLSLFDQGNANRHVGATAMNAESSRSHSIFAILIESYNKTTKKTATGKLSLVDLAGSERADKTGATADRLREAQNINKSLSALGDVISALSTNQKFIPYRNNKLTQLMQDSLGGNAKTLMFVNLSPADYNQEESLTSLMYAARVKLITNTADKNTDNEEIAKLKAIIRNLKAG 506          
BLAST of mRNA_S-dermatodea_contig963.17644.1 vs. uniprot
Match: A0A836C7Z6_9STRA (Kinesin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Z6_9STRA)

HSP 1 Score: 462 bits (1188), Expect = 1.780e-157
Identity = 249/358 (69.55%), Postives = 288/358 (80.45%), Query Frame = 1
Query:  436 MKGKIRVFARCRPFAQYELSQDCKRAVRQLDEATLEVDGHHGVKQFVFDSVFSEDNTQEDIFEDTKNLVQSALDGFNVCVFAYGQTGSGKTWTMTGGTGELRGLTPRVIEEIFASIDKTKGSTEVKVSCYFIELYLDQLRDLLFAMDRPNDA-PPKLEVHLDANKMVVVKNVVIKARLKRDSNDLTSVFTQGNRHRKVGGTKMNAESSRSHSVFSILLEVYNRTTKKTTTGKLSLVDLAGSERADKTGATSDRLKEAQSINKSLSALGDVISALSKNEKFIPYRNNKLTQVMQDSLGGNAKTLMFVNISPADYNQEETATALTYATRVKLITNTAEKKRDGEEVSRLKEIIRRLQAGE 1506
            MKGKIRVFARCRPFA YE  + C++ V  LDE TLEV G  G KQF+FD+ F     QE++FED KNLV+SA+DGFNVCVFAYGQTGSGKT+TM+G T E+ GLTPR I EIF   +   G  +V +SCYF+ELYLD LRDL +A+D P D  PPKL++ +D  KMV VK VV K     +  +L+++F  GNR RKVGGTKMNAESSRSHS+FS+LLEV NRTT+KT+ GKLSLVDLAGSERADKTGA ++RLKEAQSINKSLSALGDVISALS  EKFIPYRNNKLTQ+MQDSLGGNAKTLMFVNISPADYN +ET T+L YA RVKLITN A K +D  EV+RLK II+R+QAGE
Sbjct:    1 MKGKIRVFARCRPFAGYERERGCQQCVAFLDETTLEVRGSRGPKQFIFDAAFPASVGQEEVFEDMKNLVRSAMDGFNVCVFAYGQTGSGKTFTMSG-TPEMPGLTPRTIAEIFLLKEGLAGVADVTISCYFVELYLDNLRDLFYAVDNPRDTKPPKLDIKVDEKKMVYVKGVVTKPAASAE--ELSALFDAGNRMRKVGGTKMNAESSRSHSIFSVLLEVANRTTQKTSLGKLSLVDLAGSERADKTGAAAERLKEAQSINKSLSALGDVISALSTEEKFIPYRNNKLTQLMQDSLGGNAKTLMFVNISPADYNADETLTSLAYAARVKLITNNASKTQDSAEVARLKAIIKRMQAGE 355          
BLAST of mRNA_S-dermatodea_contig963.17644.1 vs. uniprot
Match: A0A7S1U107_9STRA (Kinesin-like protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U107_9STRA)

HSP 1 Score: 446 bits (1146), Expect = 9.670e-151
Identity = 237/403 (58.81%), Postives = 303/403 (75.19%), Query Frame = 1
Query:  301 LRARAEEAKEVQTQLEVANGENVRLEGLYHAEQVLRKKYWNAMEDMKGKIRVFARCRPFAQYELSQDCKRAVRQLDEATLEVDGHHGVKQFVFDSVFSEDNTQEDIFEDTKNLVQSALDGFNVCVFAYGQTGSGKTWTMTGGTG-ELRGLTPRVIEEIFASIDKTKGSTEVKVSCYFIELYLDQLRDLLFAMDRPN-DAPPKLEVHLDANKMVVVKNVVIKARLKRDSNDLTSVFTQGNRHRKVGGTKMNAESSRSHSVFSILLEVYNRTTKKTTTGKLSLVDLAGSERADKTGATSDRLKEAQSINKSLSALGDVISALSKNEKFIPYRNNKLTQVMQDSLGGNAKTLMFVNISPADYNQEETATALTYATRVKLITNTAEKKRDGEEVSRLKEIIRRLQAG 1503
            LR +AEEA  +  +L  +      L+  Y  E+ LR+KYWN MEDMKGKIRV+ARCRPFAQYE  +   + V  +DE+TL VD   G ++F +D+VF+  +TQ+++F++  +L+QSALDG+NVC FAYGQTGSGKT+TMTG  G E  GLTPR+++E F  I + +G  +VKVSCYF+ELY D  RDL + +D    + PPKL++ L+    V ++N ++K        +L  +F +GN +R V  T MNA SSRSHS+F+I LE Y+R TKKT+ GK+++VDLAGSERADKTGAT DR++EAQ+INKSLSALGDVISALS  + FIPYRNNKLTQVMQDSLGGNAKTLMFVNISPADYNQEET T+L YA+RVKLITN A+K+ D  EV+RL+  IRRL+AG
Sbjct:    2 LREKAEEAARLGRELRESRAAEEALQKQYQEEKTLRRKYWNMMEDMKGKIRVYARCRPFAQYEKERGASQVVTFVDESTLAVDTSRGPREFTYDNVFAPGSTQQEVFDECSSLMQSALDGYNVCCFAYGQTGSGKTYTMTGVPGTEHAGLTPRLVDECFNLIAENEGKIDVKVSCYFVELYNDGFRDLFWPLDHGRRETPPKLDIKLNQRHTVYIRNAIVKE--VTHGEELLDLFERGNANRVVASTNMNATSSRSHSIFAIQLECYDRMTKKTSVGKITIVDLAGSERADKTGATGDRIREAQAINKSLSALGDVISALSNGDSFIPYRNNKLTQVMQDSLGGNAKTLMFVNISPADYNQEETLTSLLYASRVKLITNDAKKQEDSAEVARLRAYIRRLEAG 402          
BLAST of mRNA_S-dermatodea_contig963.17644.1 vs. uniprot
Match: A0A067BRV6_SAPPC (Kinesin-like protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BRV6_SAPPC)

HSP 1 Score: 436 bits (1122), Expect = 7.350e-148
Identity = 234/356 (65.73%), Postives = 282/356 (79.21%), Query Frame = 1
Query:  436 MKGKIRVFARCRPFAQYELSQDCKRAVRQLDEATLEVDGHHGVKQFVFDSVFSEDNTQEDIFEDTKNLVQSALDGFNVCVFAYGQTGSGKTWTMTGGTGELRGLTPRVIEEIFASIDKTKGSTEVKVSCYFIELYLDQLRDLLFAMDRPNDAPPKLEVHLDANKMVVVKNVVIKARLKRDSNDLTSVFTQGNRHRKVGGTKMNAESSRSHSVFSILLEVYNRTTKKTTTGKLSLVDLAGSERADKTGATSDRLKEAQSINKSLSALGDVISALSKNEKFIPYRNNKLTQVMQDSLGGNAKTLMFVNISPADYNQEETATALTYATRVKLITNTAEKKRDGEEVSRLKEIIRRLQAG 1503
            MKGKIRV+ RCRP +  EL + C  AV+ LDE TLE++   G K F +D VF+  NTQ+ +FEDTKNL+QSALDG+NVC+FAYGQTGSGKT+TMTG T +  G+TPR+I+ +F S D  KG+  +K   Y +ELY D L DL F +D   D  PKLE+  +   MVVV+N+V+K     D++    +F Q N+ R+VG TKMNAESSRSHSVF+IL+E YN+TTKKT+ GKLSLVDLAGSERA KTGAT+DRLKEAQ+INKSLSALGDVISALS NEKFIPYRNNKLTQ+MQDSLGGNAKTLMFVNISPADYNQEET T+L+YA+RVKLITN A K  D EEV++LK II++L+AG
Sbjct:    1 MKGKIRVYCRCRPMSGSELDRGCHSAVKFLDEYTLELETPRGPKSFAYDQVFNPSNTQDQVFEDTKNLLQSALDGYNVCIFAYGQTGSGKTFTMTG-TADHPGITPRLIDLMFKSGDALKGNNTIKYEAYMLELYNDALIDLFFQLDNHPDKAPKLEIKKNDKGMVVVQNIVVKPCT--DTHQTLKLFDQANKKRQVGATKMNAESSRSHSVFTILIENYNKTTKKTSVGKLSLVDLAGSERAGKTGATADRLKEAQAINKSLSALGDVISALSTNEKFIPYRNNKLTQLMQDSLGGNAKTLMFVNISPADYNQEETQTSLSYASRVKLITNNANKNSDSEEVAKLKAIIKQLKAG 353          
BLAST of mRNA_S-dermatodea_contig963.17644.1 vs. uniprot
Match: A0A1V9ZIU4_9STRA (Kinesin-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZIU4_9STRA)

HSP 1 Score: 446 bits (1146), Expect = 5.830e-147
Identity = 248/418 (59.33%), Postives = 306/418 (73.21%), Query Frame = 1
Query:  289 ELQELRARAEEAKEVQTQLEVANGENVRLEGLYHAEQVLRKKYWNAMEDMKGKIRVFARCRPFAQYELSQDCKRAVRQLDEATLEVDGHHGVKQFVFDSVFSEDNTQEDIFEDTKNLVQSALDGFNVCVFAYGQTGSGKTWTMTGGTGELRGLTPRVIEEIFASIDKTKGSTEVKVSCYFIELYLDQLRDLLFAMDRPNDA-------------PPKLEVHLDANKMVVVKNVVIKARLKRDSNDLTSVFTQGNRHRKVGGTKMNAESSRSHSVFSILLEVYNRTTKKTTTGKLSLVDLAGSERADKTGATSDRLKEAQSINKSLSALGDVISALSKNEKFIPYRNNKLTQVMQDSLGGNAKTLMFVNISPADYNQEETATALTYATRVKLITNTAEKKRDGEEVSRLKEIIRRLQAG 1503
            E+++LR+ A  A +   +L        +LE     EQ LRKKY+N +EDMKGKIRV+ RCRP +  EL + C+ AVR LDE TLE+D   G K F +D VF+  NTQE +FEDTKNL+QSALDG+NVC+FAYGQTGSGKT+TMTG      G+TPR+I+ +F S +  KG+  +    Y +ELY D L DL + ++   D               PKLE+  +   MVVV+N+V+K     D++    +F   N+ R+VG TKMNAESSRSHSVF+IL+E YN+TTKKT+ GKLSLVDLAGSERA KTGAT+DRLKEAQ+INKSLSALGDVI+ALS NEKFIPYRNNKLTQ+MQDSLGGNAKTLMFVNISPADYNQEET T+L+YA+RVKLITN A K  D EEV++LK II++L+AG
Sbjct:  260 EVEKLRSDAAVAAQTAQELSTLKESYSKLEXXXKEEQTLRKKYYNTIEDMKGKIRVYCRCRPMSGSELERGCQSAVRFLDECTLELDTPRGPKSFAYDQVFNPANTQEQVFEDTKNLLQSALDGYNVCIFAYGQTGSGKTFTMTGSESHP-GITPRLIDLLFKSSEALKGNNTITYEAYMLELYNDALIDLFYLLESHPDKVISESDMKITPFKAPKLEIKKNDKGMVVVQNIVVKPCT--DTHQTLKLFEHANKKRQVGATKMNAESSRSHSVFTILIENYNKTTKKTSIGKLSLVDLAGSERAGKTGATADRLKEAQAINKSLSALGDVIAALSTNEKFIPYRNNKLTQLMQDSLGGNAKTLMFVNISPADYNQEETQTSLSYASRVKLITNNANKNSDSEEVAKLKAIIKQLKAG 674          
BLAST of mRNA_S-dermatodea_contig963.17644.1 vs. uniprot
Match: T0QAH1_SAPDV (Kinesin motor domain-containing protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QAH1_SAPDV)

HSP 1 Score: 453 bits (1166), Expect = 6.290e-143
Identity = 242/370 (65.41%), Postives = 292/370 (78.92%), Query Frame = 1
Query:  394 EQVLRKKYWNAMEDMKGKIRVFARCRPFAQYELSQDCKRAVRQLDEATLEVDGHHGVKQFVFDSVFSEDNTQEDIFEDTKNLVQSALDGFNVCVFAYGQTGSGKTWTMTGGTGELRGLTPRVIEEIFASIDKTKGSTEVKVSCYFIELYLDQLRDLLFAMDRPNDAPPKLEVHLDANKMVVVKNVVIKARLKRDSNDLTSVFTQGNRHRKVGGTKMNAESSRSHSVFSILLEVYNRTTKKTTTGKLSLVDLAGSERADKTGATSDRLKEAQSINKSLSALGDVISALSKNEKFIPYRNNKLTQVMQDSLGGNAKTLMFVNISPADYNQEETATALTYATRVKLITNTAEKKRDGEEVSRLKEIIRRLQAG 1503
            EQ LRKKY+N +EDMKGKIRV+ RCRP +  EL + C  AV+ LDE TLE++   G K F +D VF+  NTQ+ +FEDTKNL+QSALDG+NVC+FAYGQTGSGKT+TMTG T +  G+TPR+I+ +F S D  KG+  +    Y +ELY D L DL F +D   D  PKLE+  +   MVVV+N+V+K     D++    +F   N+ R+VG TKMNAESSRSHSVF+IL+E YN+TTKKT+ GKLSLVDLAGSERA KTGAT+DRLKEAQ+INKSLSALGDVISALS NEKFIPYRNNKLTQ+MQDSLGGNAKTLMFVNISPADYNQEET T+L+YA+RVKLITN A K  D EEV++LK II++L+AG
Sbjct:  996 EQALRKKYYNTIEDMKGKIRVYCRCRPMSGSELERGCHSAVKFLDEYTLELETPRGPKSFAYDQVFNPSNTQDQVFEDTKNLLQSALDGYNVCIFAYGQTGSGKTFTMTG-TADHPGITPRLIDLMFKSGDALKGNNTITYEAYMLELYNDALIDLFFQLDNHPDKAPKLEIKKNDKGMVVVQNIVVKPCT--DTHQTLKLFDHANKKRQVGATKMNAESSRSHSVFTILIENYNKTTKKTSVGKLSLVDLAGSERAGKTGATADRLKEAQAINKSLSALGDVISALSTNEKFIPYRNNKLTQLMQDSLGGNAKTLMFVNISPADYNQEETQTSLSYASRVKLITNNANKNSDSEEVAKLKAIIKQLKAG 1362          
BLAST of mRNA_S-dermatodea_contig963.17644.1 vs. uniprot
Match: A0A1V9YU11_9STRA (Kinesin n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YU11_9STRA)

HSP 1 Score: 448 bits (1152), Expect = 9.610e-141
Identity = 247/408 (60.54%), Postives = 304/408 (74.51%), Query Frame = 1
Query:  289 ELQELRARAEEAKEVQTQLEVANGENVRLEGLYHAEQVLRKKYWNAMEDMKGKIRVFARCRPFAQYELSQDCKRAVRQLDEATLEVDGHHGVKQFVFDSVFSEDNTQEDIFEDTKNLVQSALDGFNVCVFAYGQTGSGKTWTMTGGTGELRGLTPRVIEEIFASIDKTKGSTEVKVSCYFIELYLDQLRDLLFAMDRPNDAPPKLEVHLDANKMVVVKNVVIKARLKRDSNDLTSVFTQGNRHRKVGGTKMNAESSRSHSVFSILLEVYNRTTKK---TTTGKLSLVDLAGSERADKTGATSDRLKEAQSINKSLSALGDVISALSKNEKFIPYRNNKLTQVMQDSLGGNAKTLMFVNISPADYNQEETATALTYATRVKLITNTAEKKRDGEEVSRLKEIIRRLQAG 1503
            E+++LR  A  A +   +L V      +LE  Y  EQ LRKKY+N +EDMKGKIRV+ RCRP +  EL + C+ AVR LDE TLE++   G K F +D VF+  NTQ+ +FEDTKNL+QSALDG+NVC+FAYGQTGSGKT+TMTG      G+TPR+I+ +F S +  K +  +    Y +ELY D L DL + +D  +D  PKLE+  +   MVVV+N+V+K     +      +F   N+ R+ G TKMNAESSRSHSVF+IL+E YN+TTKK   T+ GKLSLVDLAGSERA KTGAT+DRLKEAQ+INKSLSALGDVISALS NEKFIPYRNNKLTQ+MQDSLGGNAKTLMFVNISPADYNQEET T+L+YA+RVKLITN A K  D EEV++LK II++L+AG
Sbjct:  978 EVEKLRTEAATAAQTTQELTVLKESFAKLEDNYKEEQALRKKYYNTIEDMKGKIRVYCRCRPMSGSELERGCQSAVRFLDEYTLELETSRGPKSFAYDQVFNPSNTQDQVFEDTKNLLQSALDGYNVCIFAYGQTGSGKTFTMTGSESNP-GITPRLIQLMFKSSEALKNNNTITYEGYMLELYNDALIDLFYQLDNNSDKAPKLEIKKNDKGMVVVQNIVVKPCTSAEQT--LKLFDSANKKRQSGATKMNAESSRSHSVFTILIENYNKTTKKAYNTSVGKLSLVDLAGSERAGKTGATADRLKEAQAINKSLSALGDVISALSTNEKFIPYRNNKLTQLMQDSLGGNAKTLMFVNISPADYNQEETQTSLSYASRVKLITNNANKNSDSEEVAKLKAIIKQLKAG 1382          
BLAST of mRNA_S-dermatodea_contig963.17644.1 vs. uniprot
Match: A0A7S1CA28_9STRA (Kinesin-like protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CA28_9STRA)

HSP 1 Score: 423 bits (1088), Expect = 9.570e-140
Identity = 226/376 (60.11%), Postives = 279/376 (74.20%), Query Frame = 1
Query:  382 LYHAEQVLRKKYWNAMEDMKGKIRVFARCRPFAQYELSQDCKRAVRQLDEATLEVDGHHGVKQFVFDSVFSEDNTQEDIFEDTKNLVQSALDGFNVCVFAYGQTGSGKTWTMTGGTGELRGLTPRVIEEIFASIDKTKGSTEVKVSCYFIELYLDQLRDLLFAMDRP--NDAPPKLEVHLDANKMVVVKNVVIKARLKRDSNDLTSVFTQGNRHRKVGGTKMNAESSRSHSVFSILLEVYNRTTKKTTTGKLSLVDLAGSERADKTGATSDRLKEAQSINKSLSALGDVISALSKNEKFIPYRNNKLTQVMQDSLGGNAKTLMFVNISPADYNQEETATALTYATRVKLITNTAEKKRDGEEVSRLKEIIRRLQAG 1503
            LY  EQVLRKKYWN MEDMKGKIRV+AR RP +  E+ +     V+  D+ +++++   G++QFVFD+ F    +QE +F DTKNL+QSA DG+NVC+FAYGQTGSGKT+TMTG  G   G+TPR + EIF   +    S   +++CY +ELY D L DL + MD+     AP KL++  D   MV + N +IK     D+ ++ ++F  GN  R VG TKMNAESSRSH +FS+L+EVYN+ TKK TTGKLSLVDLAGSER  KTGA++DRLKEAQ+INKSLSALGDVISALS  EKFIPYRNNKLTQ+M DSLGGNAKTLMFVN+SPADYN +ET T+L YA+RVKLITN A K  D EEV++LK  I  L+AG
Sbjct:  182 LYRKEQVLRKKYWNMMEDMKGKIRVYARARPMSGSEIERGNYSVVKFPDDVSIDLETPKGLRQFVFDATFGPGTSQEAVFNDTKNLIQSAFDGYNVCIFAYGQTGSGKTYTMTGAAGSP-GVTPRAMAEIFDLAEGNAKSMRTRITCYMVELYNDSLVDLFWTMDKKLSKGAPAKLDIKKDKKGMVYITNAIIKEAA--DAGEILTLFDAGNGARHVGATKMNAESSRSHLIFSVLIEVYNKQTKKMTTGKLSLVDLAGSERVGKTGASADRLKEAQAINKSLSALGDVISALSTGEKFIPYRNNKLTQLMSDSLGGNAKTLMFVNVSPADYNVDETQTSLVYASRVKLITNNANKNSDSEEVAKLKRTIAELRAG 554          
BLAST of mRNA_S-dermatodea_contig963.17644.1 vs. uniprot
Match: D0NBG3_PHYIT (Kinesin-like protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NBG3_PHYIT)

HSP 1 Score: 426 bits (1095), Expect = 6.100e-139
Identity = 255/470 (54.26%), Postives = 325/470 (69.15%), Query Frame = 1
Query:  112 LETKLKKMGDDSDRKQQK----LATELDAASKGWESCKAELAQARKEREALRQQMSAMGTMGEELQELRARAEEAKEVQTQLEVANGENVRLEGLYHAEQVLRKKYWNAMEDMKGKIRVFARCRPFAQYELSQDCKRAVRQLDEATLEVDG-HHGVKQFVFDSVFSEDNTQEDIFEDTKNLVQSALDGFNVCVFAYGQTGSGKTWTMTGGTGELRGLTPRVIEEIFASIDKTKGSTEVKVSCYFIELYLDQLRDLLFAMDRPNDAPPKLEVHLDANKMVVVKNVVIKARLKRDSNDLT-SVFTQGNRHRKVGGTKMNAESSRSHSVFSILLEVYNRTTKKTTTGKLSLVDLAGSERADKTGATSDRLKEAQSINKSLSALGDVISALSKNEKFIPYRNNKLTQVMQDSLGGNAKTLMFVNISPADYNQEETATALTYATRVKLITNTAEKKRDGEEVSRLKEIIRRLQAG 1503
            +E K KK+ +DS++  +K    L  +L AA K  +  + + A  +KE      +   +G +  E+ +LR +A     +   L  A  +   LE  Y  EQ LRKKY+N +EDMKGKIRV+ARCRP +  E  + C   V+ +DE ++EV G +   K F +D VFS  +TQ+ +FEDTKNL+QSA+DG+NVC+FAYGQTGSGKT+TMTG   +  GL+PR I  +F   ++ K +  V      +ELY D L DL   +D       KL++  +   MVVV+N  +K   K  S D T  +F   N+ R+VG TKMNAESSRSHS+FS+L+E YN+TTK TT GKLSLVDLAGSERA KTGAT++RLKEAQ+INKSLSALGDVISALS NEKFIPYRNNKLTQ+MQDSLGGNAKTLMFVNISPADYNQEET T+LTYA+RVKLITN A K  + E+V+RLK II++L+AG
Sbjct:  241 MEKKHKKVLEDSEKNTKKEIAALTQQLQAAHKVSQELQDQAAALQKELGVAGGKAKQLGQLEGEVLQLREQAALVAPLHNDLRDAKAQYATLETSYREEQALRKKYYNQIEDMKGKIRVYARCRPMSGSENERGCITCVKFIDEFSVEVSGGNRAAKTFAYDQVFSPASTQQQVFEDTKNLLQSAVDGYNVCIFAYGQTGSGKTFTMTGSESDP-GLSPRAIHHLFQLAEEGKANFTVSFQATMLELYNDSLIDLFHLVDGGGAHDNKLDIKKNEKGMVVVQNATLK---KCTSPDQTLRLFEAANKKRQVGATKMNAESSRSHSIFSLLVESYNKTTKATTIGKLSLVDLAGSERAGKTGATAERLKEAQAINKSLSALGDVISALSTNEKFIPYRNNKLTQLMQDSLGGNAKTLMFVNISPADYNQEETVTSLTYASRVKLITNNANKNSESEQVNRLKAIIKQLRAG 706          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig963.17644.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSQ9_ECTSI5.010e-22278.62Similar to kinesin-C n=1 Tax=Ectocarpus siliculosu... [more]
A0A6V1MSS8_HETAK1.170e-17861.61Kinesin-like protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836C7Z6_9STRA1.780e-15769.55Kinesin-like protein n=1 Tax=Tribonema minus TaxID... [more]
A0A7S1U107_9STRA9.670e-15158.81Kinesin-like protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A067BRV6_SAPPC7.350e-14865.73Kinesin-like protein n=1 Tax=Saprolegnia parasitic... [more]
A0A1V9ZIU4_9STRA5.830e-14759.33Kinesin-like protein n=1 Tax=Achlya hypogyna TaxID... [more]
T0QAH1_SAPDV6.290e-14365.41Kinesin motor domain-containing protein n=2 Tax=Sa... [more]
A0A1V9YU11_9STRA9.610e-14160.54Kinesin n=1 Tax=Thraustotheca clavata TaxID=74557 ... [more]
A0A7S1CA28_9STRA9.570e-14060.11Kinesin-like protein n=1 Tax=Bicosoecida sp. CB-20... [more]
D0NBG3_PHYIT6.100e-13954.26Kinesin-like protein n=1 Tax=Phytophthora infestan... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig963contigS-dermatodea_contig963:11668..22190 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score688.0
Seed ortholog evalue3.4e-195
Seed eggNOG ortholog2880.D8LSQ9
KEGG koko:K10406
EggNOG free text desc.microtubule motor activity
EggNOG OGsCOG5059@1,KOG0239@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Hectar predicted targeting categoryother localisation
Exons11
Model size1507
Cds size1506
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925421.6378179-CDS-S-dermatodea_contig963:11667..118291622925421.6378179-CDS-S-dermatodea_contig963:11667..11829Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig963 11668..11829 +
1694079922.1092277-CDS-S-dermatodea_contig963:11667..118291694079922.1092277-CDS-S-dermatodea_contig963:11667..11829Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig963 11668..11829 +
1622925421.6478863-CDS-S-dermatodea_contig963:12442..125411622925421.6478863-CDS-S-dermatodea_contig963:12442..12541Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig963 12443..12541 +
1694079922.123714-CDS-S-dermatodea_contig963:12442..125411694079922.123714-CDS-S-dermatodea_contig963:12442..12541Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig963 12443..12541 +
1622925421.65778-CDS-S-dermatodea_contig963:13236..133741622925421.65778-CDS-S-dermatodea_contig963:13236..13374Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig963 13237..13374 +
1694079922.1346061-CDS-S-dermatodea_contig963:13236..133741694079922.1346061-CDS-S-dermatodea_contig963:13236..13374Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig963 13237..13374 +
1622925421.6709266-CDS-S-dermatodea_contig963:14873..149561622925421.6709266-CDS-S-dermatodea_contig963:14873..14956Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig963 14874..14956 +
1694079922.1440887-CDS-S-dermatodea_contig963:14873..149561694079922.1440887-CDS-S-dermatodea_contig963:14873..14956Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig963 14874..14956 +
1622925421.6828349-CDS-S-dermatodea_contig963:16017..161941622925421.6828349-CDS-S-dermatodea_contig963:16017..16194Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig963 16018..16194 +
1694079922.1554976-CDS-S-dermatodea_contig963:16017..161941694079922.1554976-CDS-S-dermatodea_contig963:16017..16194Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig963 16018..16194 +
1622925421.7014518-CDS-S-dermatodea_contig963:17439..175871622925421.7014518-CDS-S-dermatodea_contig963:17439..17587Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig963 17440..17587 +
1694079922.17106-CDS-S-dermatodea_contig963:17439..175871694079922.17106-CDS-S-dermatodea_contig963:17439..17587Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig963 17440..17587 +
1622925421.7132103-CDS-S-dermatodea_contig963:18061..182301622925421.7132103-CDS-S-dermatodea_contig963:18061..18230Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig963 18062..18230 +
1694079922.1802733-CDS-S-dermatodea_contig963:18061..182301694079922.1802733-CDS-S-dermatodea_contig963:18061..18230Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig963 18062..18230 +
1622925421.723879-CDS-S-dermatodea_contig963:19545..196581622925421.723879-CDS-S-dermatodea_contig963:19545..19658Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig963 19546..19658 +
1694079922.189621-CDS-S-dermatodea_contig963:19545..196581694079922.189621-CDS-S-dermatodea_contig963:19545..19658Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig963 19546..19658 +
1622925421.7344773-CDS-S-dermatodea_contig963:20166..203791622925421.7344773-CDS-S-dermatodea_contig963:20166..20379Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig963 20167..20379 +
1694079922.2000155-CDS-S-dermatodea_contig963:20166..203791694079922.2000155-CDS-S-dermatodea_contig963:20166..20379Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig963 20167..20379 +
1622925421.7461815-CDS-S-dermatodea_contig963:21194..213411622925421.7461815-CDS-S-dermatodea_contig963:21194..21341Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig963 21195..21341 +
1694079922.2096567-CDS-S-dermatodea_contig963:21194..213411694079922.2096567-CDS-S-dermatodea_contig963:21194..21341Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig963 21195..21341 +
1622925421.7590616-CDS-S-dermatodea_contig963:22133..221901622925421.7590616-CDS-S-dermatodea_contig963:22133..22190Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig963 22134..22190 +
1694079922.22299-CDS-S-dermatodea_contig963:22133..221901694079922.22299-CDS-S-dermatodea_contig963:22133..22190Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig963 22134..22190 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig963.17644.1prot_S-dermatodea_contig963.17644.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig963 11668..22190 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig963.17644.1

>prot_S-dermatodea_contig963.17644.1 ID=prot_S-dermatodea_contig963.17644.1|Name=mRNA_S-dermatodea_contig963.17644.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=502bp
KLEAQVAKLEAQLAAAVTAKVSAGDSGGAKAKADVKALETKLKKMGDDSD
RKQQKLATELDAASKGWESCKAELAQARKEREALRQQMSAMGTMGEELQE
LRARAEEAKEVQTQLEVANGENVRLEGLYHAEQVLRKKYWNAMEDMKGKI
RVFARCRPFAQYELSQDCKRAVRQLDEATLEVDGHHGVKQFVFDSVFSED
NTQEDIFEDTKNLVQSALDGFNVCVFAYGQTGSGKTWTMTGGTGELRGLT
PRVIEEIFASIDKTKGSTEVKVSCYFIELYLDQLRDLLFAMDRPNDAPPK
LEVHLDANKMVVVKNVVIKARLKRDSNDLTSVFTQGNRHRKVGGTKMNAE
SSRSHSVFSILLEVYNRTTKKTTTGKLSLVDLAGSERADKTGATSDRLKE
AQSINKSLSALGDVISALSKNEKFIPYRNNKLTQVMQDSLGGNAKTLMFV
NISPADYNQEETATALTYATRVKLITNTAEKKRDGEEVSRLKEIIRRLQA
GE
back to top

mRNA from alignment at S-dermatodea_contig963:11668..22190+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig963.17644.1 ID=mRNA_S-dermatodea_contig963.17644.1|Name=mRNA_S-dermatodea_contig963.17644.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=10523bp|location=Sequence derived from alignment at S-dermatodea_contig963:11668..22190+ (Saccorhiza dermatodea SderLu1190fm monoicous)
AAGCTCGAGGCCCAGGTGGCGAAGCTTGAGGCGCAGCTTGCTGCCGCGGT CACCGCCAAGGTCTCGGCTGGGGATTCTGGCGGAGCAAAGGCCAAGGCAG ACGTGAAGGCGTTGGAGACAAAATTGAAGAAGATGGGAGACGATTCCGAC AGGAAGCAGCAGGTAAACGGAAAATTGATTAAAGCTTTTTGCGCTTTACA ATCTAATCTTTGGTGCATTTGGCCTCGAGACGGTGGAGAACTAGTCTTGC ACCACACTTTTTTCGCTTTCGATTGTCGCATCGCATCTTTTCGAGGGCTG CCGAACGAAGGCAATCGCCAAGGTGGAGGGCGACACGCTGCAGAGTGCGC GCGAACGACACGGCCCGTTGGTGACACTCTTTCAGTCCTGCCAACTCCTT ATCCCTCGCGCGATGGTGTCCCGATGCGTGCTGTGCGTTACATCCGTTTT TCCTCGTGCACCATGCTGAACACGTGTGGCACGTCAAAGGGGCGGGCCTC ACATGCAAATGCACAGCTGCTTACCCAAAGTTACACAATGGTAGTCGGGA TACCGTGTTCTCTCGACAGCGCTTGACGCGGGACAAGCTACGGTGCCAGT TATGCACGGGTGACCACGGGAAGCCCAAACGCAAAACGTGCTCGCACTCA AACGATCCGCCAGACAGTCTCGTGTAGTCACTCGCTCCGAAACATGAGGT AGTGTCGAGTACCTCATGCCTCCAGCTTGATTACCTCGTGTCTGGAACGT TGCGTTTCCTGTGGCAACGGTGCAGAAACTCGCGACTGAGTTAGATGCGG CATCGAAGGGCTGGGAGAGCTGCAAGGCCGAACTTGCTCAGGCGCGAAAA GAGCGGGAGGCTCTGCGGCAGCAAGTGAGATCGAGCGTTGAGATACGAGT TCTGTTTTTGTCTGCGATAATGGTGATATACTATTAATGGCAAAACATTT CAAACGAAAGATGAAGATCCCAGGATAGTATGAAGACCAAACTGCGCGTA CCTTTGCGTTTTCTCTTCAGACGAAACTTGGTAGTCCCTTCTATGCAAGT ACGTGCTTTCGGCCAGGTTTCTCCTGAGGCAAGAGAGAGCTCAACATTTT GGGACCTCTTTGGCTTTTGGTTTCAACGAACCTCGCCAAATTTGCATAAC CGATTTGCTTCGCAGCGCTCATGACATAAGTCGAAGCTGCTGTTGGAACC CCGTTATATATCAGCGGTTGGTAGGCTAAGCGACCGAAGATGCAAGAAAA ATCGAGAGTGCGTAGATTCATGGCTTTTTCGTTGCATCTTCCGTAGCGAT TGTACATTGACGATGGTCTCAACACCGAACACCAGTCCGTAGGAACCGTT CGGGAGGCATGAATCGAACACGGATCGAACACAACGTCGTCCTCGCTTGG GTTTCGCCAAAATCCCTGAATATCACCAATATATCTCTACAAATTATTAG CGCCAAATCTCACTGAGGCTGGTGCTCAACACCTTGCGCTTGTGCCCGCC CTATGCACGGGTAACTCGTGCGTGTTCTCTCGCACGTGTTGCATGCTGTC CGTTTTTTCCCTCGCGAAGATGTCGGCGATGGGCACGATGGGCGAGGAAC TGCAGGAACTTCGGGCTCGCGCCGAGGAGGCAAAGGAAGTGCAGACGCAG CTGGAGGTCGCCAATGGAGAGAATGTCCGACTCGAGGGTCTCTACCACGC CGAGCAGGTGAGGGATTTCGGCATATCCTGTGGTACCGTATTGTTTGCGT GCCAAAAGCACGAGGCAAGCCGTTGCGACAACACAAGCCTGGGCAAGACA AGAAACAACATCGCTGTTTGGTTTGCTTGCCTTTGCTCGTGTCGTCGCAA CATTTTGCGTGCTACCCCCACCGGCCTCATGCTACCTATACATTGAAGTC GTTCATCCTACATCGCACTTAATATGTAAGCTGTGAACGAGAGGGGTTTC TCCAGGTACTAAGATTTCTTCGTTTGAGGCCATGGCTCTCGGTTTATTGT AATTTTTATCTCGTTGTGTGTGTGGATGCCCATTTCTTGGCGGGATCTTC CGTGTCTATACCTGCTGTACCTATTTCGCGACTGCGAGCGGGCTCGGAGC GGAGAGGCCGATAGGCTTCACACTTGTGTGATATAAATACCTAACAATAA ATAGCTAAATAACTGGGGGACAAAATCATGTTTGGCTGCTTCGTTTACAT GAACTGACGCACTTTCGGGATTTGGCTGTAAATAGCCATATTTCTCTTGG ACGTGACAACATGTATGAAATCGCGTTTTCTTTTTTTTTTTTTCTTTTTT TTTCTCTGCCATGTGTATGTCCGTTTCTGCAAGGTGCACGCATGCACGAC AACCCGGAAGTATTTATTGACCTTGGGTTTTCTACCCGTGTTTTGAGGCG ACCTTCGTGCAACCACTATCTTAAACCCCGAAAAGCAAAGATGCCCGGCT GCTGCTACGGTCGAGCATTGTTAACATACCCAGATCTTTTGTAAATGAAT ACCGCTCTGCCCATTTTTTAATAGCGATTTAGAGGTGACCTTCGATGCCG AATTTCCTATGATCATACAATTTGTCATGCCATATGTCATAGGGATTTTA GAGGGATGCCTTACAGAGTAGCAGTAATTTGTGACAACGCACACCCCACG GGCGTAGCCGTGGCGTCTCTCTAGTACTGAGTTCAAACACAAAAAACGCC TGGCCCCGAGCATCTTCGGGATCGTTTGTTTTTGTTTTTAAAGAAAACAC GAGTTTTGGCCAGACATAAATCCTGTAGCTCGTGCTTGTATCTTAGCACA TTATTATGATAGTTTTCCTGTAAATCAGGGAGTCGGGCGCTCCGGGCGGC TTGCGGGTTAAATCTCTGTCATATCTGGACATCAGTTTTCGTTCGGTGTA GGGGTGCTGGAACTCATTTTCTGTTGTGCCTTCATGTGACCATGAGCGGG ATCAGCATCCACTTGTTTTGCAATTGCAAAAATGGCGGGCCGATCGGAAA TATGTGTGATAATCAATCAAAATTTAAACTCAAATTTGGCCGGAAGACGG TAGATGCTGTGAACCTCTAAGGCCAGACAGACTTCGTCAGAGTTTGGTGT ATTTTTCAGGAGGGCGTTTCGGAGATTTGGTTCTATGTAACCGTGTTCCT CCCTAACAGTTATAATTTCTGCCTTATCGGGTAACCATTTCTGCGCACGG GGACAGGTGCTCCGAAAGAAGTACTGGAACGCGATGGAGGACATGAAGGG AAAGATCAGAGTGTTCGCGCGGTGCAGGCCATTCGCCCAGTGAGTTACAT ATAGGCTTCCGCAAAAAGTGCCTGCGCCATTCGTTCTTTACTCCTGCTCG CCCTCAAGAGGCCGTGCTCAGCGTATAGGGTTCTGCGATTTTGTTGTAGG CCCTTGATACGGCGTTATCGCCACGGGATAGAGACTTGTCGGCGAGCCTG CTGTGAACATCGTGAACCCAACCGCGGAGGTTGGGTATCGAGGTGGGAGG TCTCAGCAAGTACGGGTAGAGCTCGATGTGCGGTATCCGCCACTGGCATG AGGGCGGCTGTCTTCCAAAAGCTGTCTTCCAAAGTGTGCTGATTCTCTGT CAACAGGTCACTTTCGAGGGAGGAATCGCGAAAAACACGCTGCCCGGTCG CAAAACGGAAGAAAAAACACCATTGGACGCAATAATCGCTCGTTGTGTCA TATACGGAACAAAGGTTTCCGTTTTTTTTTTTCCAGTCCATGAAGCGATT CGCTGTATCAATGCAAGCATGCGATGAGTATCACTACTGTTAACGAAGGC GCTTGTTTTGTCCCCATTCTTCGTCTGCGATCTACATCGATCCCACAGTG TAATATCTCCGGGATCACTCACTTGCCCGCTCACGTTTTCCGACACCTGT GCGTAGTCGTAAGTCAACGACCTGTCGAATTGCAGTCCCGGCTATCGTCC GAGTCTCTGAATGATGTCTGTACTGATGTGCACGGCCTCGAGATTCCACC GCCAGATAAAGCTCTCGGACACATCGGGCGACGGCATTGGTACAACTTGG CATTGATATATGTATGTATGCGCAACGCTGGTGCGCATGGAACACGACGA ATTATCGCATGATCGGGGGGCCAGACGAACGCGAAGACCCCTACTGCTGC ATCTGAATCTCGCCCTAACAGGGATAAGCAATACGCTGTGCTGATGTTTC CAGGAGAGACCTCGTGCGCCAAGTTAGAAACAACCCCGCGAGTGTCGAAC CGTAACATTTCGCCAGCATTTCGGTCCCTCAGCACAAGCCTGGAACCTAA CCCGCCGAGGCCACATTAACCTGCGGTACCGGCGAACACGAAAACCGAAG GTACGAGCTCAGTCAAGACTGCAAGAGGGCTGTCCGCCAATTGGACGAGG CCACGCTCGAGGTGGACGGGCACCACGGGGTAAAGCAGTTCGTCTTCGAC AGCGTGTTCTCGGAAGACAACACCCAGGAGGACATTTTCGAGGATACCAA GAACCTGGTACAGTCCGCTCTTGACGGGTGAGAATCACGGTCTGGCCGGA ACGTCAGCGTCCTATTGTGCGGTTCGCGATCCATTCTTCCTTGTGCGATT CCTGGTCTTTGTCGCACGGCAAATTGCGTATCCAAAGAGTGCTTGCCACG GGTATGGCCCCATTGTCTCCAGGCCGGACACCGTCCGTGAACGCGCAATC TAGGCTGTTGGCTGGACGTACGCGCGCGATGGTTGACCACACACGACTAG TCGATTTTCTAAGAGCAGTTGTTTGGCGAGTCGAGGCCCTCTTCGTGGAT CGCTATGAAACGCCTCCATCAATCGGTTGACAAAGAAGGTCGTTTCCGGC CTGCTTATGGTAGTCGGGGGGGTTCAAATTTGGCGACAGCCGACTTGTCC GCATTGGCGCCAGAGCGCCGTTTCCTATCTACATACAGCAGTGGGTCAGT ATATGGAAGTGTGTATTTACCTGCCACGGAGTCGAACAAGAAGACAACAA GTGGCGTCGTTGCTCCAGAACTTCTGGTAATTCGAAGCGCATACCCTCGA CTCCTTGGGTGATCACGGCAACCGGAACTGTCTCGGCCTGCTTGCTAAGC GAGACGCTAACTTGTGCCGCAAAGAGCGCAGGGGCGGACCCCGCACATGC CCCAGAAACGAAGGCGGAGTTCCTTGTTGTGCTTTAAATCTTTAAATGAT ACTGGCGGTTACATTCGAGGCGACTAAGACTGCGATAGATCGCTTTCGCG TCCCTCGACTGTATGTGTGGTGGCCTCACAGCGAGAAACCGAATGAATAC AACACTTCAACTCCAACCCCCCCTGTGCACCCTGTAAATTGTTTTTGGAA GTGCTCTCTTCGCCCATCTCTGCAACCCGAAAAACGAATGTGCCAATATA TGCTTGTTGGTGTGTGCAATTATGAGAATTTCCGGTGCGCTATCGTCCTG TGGCGATGCCTCGGTCCTTGGTAATGGCTCTGTCGCCGAGGCGACACGTA CTGTAGTCACACAGTGCACTTCGCGGTCGTGGGTGGGAGCCGAACTCACA CTTGGGTGCGTGCCCTAGTTGTGGAGGGTAGCGTGGCAAAAAAACAGCTC AGGACAGAGACACGGAATGGCGGAAACATGTTAAAGCCTTCTTCTGAAGC CCCTCCTTACCCCGCGTTACGCGTATGGGTTTTGGTTCCAAACGTGTAAC TGGTGTTATCATAGTATTCCAATCCCTCGCACCCACCTCTGGTCGTCCTG CGTGTGGTCGTATTTGGCCCAGGTTCAATGTCTGCGTGTTTGCGTACGGG CAGACCGGGTCGGGCAAGACGTGGACTATGACAGGCGGCACGGGGGAACT GCGCGGTCTTACGCCGAGAGTGATCGAGGAGATCTTCGCCAGCATTGACA AGACCAAGGGATCCACAGAGGTAATGCAGGAGGTCGTTTGCCTTTTGCCA TTTTATTCCTTCATCGTTGCATTCAAGCAAACTGATATTTGTGTAGGACG GAGCATGGGTAATTTCGAATTCAACAATGCCGCCTGTGCTACCTCGATTT ATTTTTCACTCTCATACTGAACAACAGAGCTTTCATGCCCCGAGATACGT TTCGCTCGAAAGGTGGACGGACACCCGGCGTTGGGAAAAATAAAATGTAT GCTGACATCGCCACGGGAGCACCTTTTCTGCGCACCTCCCGCGAGGCAGA ATACAGTTTTTCTCAAAACCGATGTGCAGACGACCTGGAATAACGCGACA GTCAACTACGATCCCGGCACATCATGCGAATTGAACCATCAAAGACTGCA ACAACAGGTGAAAAGCTGAAACATCGTTTTGTTTTTATTGTCTGGTGTAA AGTCAATCGGAAGGGACTGCCGTCGATACCTCTCATGAAACCAGGTGAAG GTGTCGTGCTACTTCATCGAGCTGTACCTCGACCAACTCCGGGACCTGCT CTTCGCGATGGATCGCCCCAACGATGCTCCACCAAAACTCGAGGTTCACC TCGACGCCAATAAGATGGTCGTCGTAAAGAACGTCGTTATCAAGGCAAGG CTAAAAAGGGATTGTATAGGAGTAGAGGCGGGGGGGAGGGGGGGGGCACG TTGCAACAACATATACACACACTCCGTCGGGATCCAATTTGTTTTCGTTG AAATCTGTTTATCATGAGGCTGCTTGCTCTCTTCCCTCTGAAAGCAACGT TGTCGCTAGAGAGATTTTTTCGGCGGCGGAGCAAAAGGCGACGGGGGAAA TCTTTAATTTGTTTTGGGGGGCGGGCACGCGGCAGTTTGGCGTTATGGCC TCATTTCTCTCTTGTATGCTTATGAAGGGTTTGGTGCGTCAAACAGTTTG TCTTGCGGGCACGGCACATGACTGATGGATATCCACACTGTGTACTTTAG GACTTCGGAGAACGCCGCACTCCGCATCTCGAGCTGAGACAACGAACCAT GCTGGGAACTTGAATATTCTTATCGGGTGCAAGTTACAGAACCGAGTATC AGCTCATGTACAAGCCCTTTTCGTCTCCGGTAGCCTTAGCGCCTCTGCGT CAAGAGCACTTAGTGATAGGGCATGTATCCTCCGGATTTTGCTCCCGCGT CCACGCCGGTACATGACCACGCCGAGAAATACGCATAAATCCGAGGTTAT GAACGAGCTTTTCTCGTTCGCGAGACATCATGTGAAACAATGGGAGTTGC GTTCAAGATTTGTATCTATTAATTGTGGCAGGTTCGGAGAGGAGTATGAT AGTATGTCCGATTTTCGTGCACGCATAGGACACTTTTGCAGTTGCAGGAA CGTTTTTTAAGAGGTACGGAATGGCGGGGAGCAAGTTCCGTGGGTCTCAC AGCGTCATGTATAGTGGCTCATGTAGGAGTGCGCCGTAGACGTACCACTG GGTGCGCGTCGCAAAATGCGTTTTGCTCGTGCTCACCTGCGTTGATATTC ACACATGAGTGCCGTTGTAACTTCGTGAGGTGGTCAACCCATTTCGGAAG CTGCCTTCTCCGATTTCCCCCTACTGTAATGCACGTTAACCCCCGGCTAT TGCCCTGAAAAGCGCGTGCACGTAAGCAGCGACGGCGGTAAACCCAGCTG GTTGCGCCCCTCCGCAATATCGAAAACCCTGTGCCGACTGTGCCGGAAAG AGCGCAACTTTCCCACAAGTATCGATCTCTGAACCAAATCCACTTTGCGC GATCGAGTCTTGAGCGCTTACCTCTAAAACATTTTCGAGAACGATGCGCG GAAAATCGAAAATTTGGCAGGGGATATAGGAAAGCCAACCCCCCCCCCCC CCTCCCTCCGCCAATCCTGCACTCGGCGTTGGGTGCCGGGAATTGTCCCA AACGTGAATCGATAGAGGGTGGCGCAAGCGAACGACCTCACCAGTGTTTT TACGCAAGGAAACCGTCATCGTAAGGTCGGCGGCACGAAGATGAATGCCG AGTCCAGCCGTTCTCACTCCGTCTTCAGCATCCTGCTAGAGGTAACGTAC TACTCACACGTACTGGGGAACACTGAAAATATCGAAACAGGTGGGATGGG TACGAGTGCACTCTCAAGGACCATCACCGCGCGGCACGTGGAAACCGGAG GGGCGTTTCCAGGGGAATATATTGAGTTGGGTAGTTTATGGGGTATCCAT CGCACGAAGGTGCAGGCAACTCGAGCGGCTGAACTGGGCAACATCAGAAG AATGACCCGTCAACCGCTGCTGTCTAAAGCGGATCGACCTCCTGCAACGT TCAATGTTAGGATAGAGCGGTTTGCGCGAGCGAAAATCCTCGCCTCGTCC TCTCGCAGTTACCGTGATAACCCTACACGAGCAGCCCTAGCAAGCCAGGA ACTTCACCGGACGGGTACTAAAATCAGCCACTGGGCTTCATGAATACATC GGCAGGTGTTAACTCGAACGTGTATCGTCCTTGCTTCTACGGTCGTCTGT GCGATTCCCCCTTGGTCCGTGCCATCGGGGCGAAACAAAAAAAAAACAGG TCTACAACCGCACAACAAAGAAGACCACGACGGGCAAGCTCTCGCTGGTT GATCTGGCGGGCTCGGAGAGGGCTGATAAGACGGGCGCGACCTCGGACCG CCTGAAGGAGGCTCAGAGCATCAACAAGTCGCTGTCGGCGCTCGGGGACG TGATCTCGGCGCTCTCGAAGAACGAGAAGTTTATCCCTTACAGGAATAAC AAGCTCACTCAGGTCATAAGATTACCATGCGTAGTGTATGATATTTACGG GGGTGTTATGGTGGTTTCGCTCCGCCGTGAGGGTTGTATCCTTGTTATGT CTGGACATGAGTTTTTTGTTCGGTGTAGATGTGCTGGATTTCACTTGCTC TTGAGCCATCATGTGTCCACGAGCGGGATCAGCATCCACTATTTCGATTG CAAAAATGGCGGGCCGGTCGGTTGCATGTGTGAGAATATATTTATCAAGC AATCAATCAATCAATCAATCAAGAGTAAATCACGACTAACAAAGTTTTCT GCTCAATTGCGTGTTCAAGGTTTTTTTTTTAACGTCCGCTCGAACGCTTT AATTGGCAATGTGTTTTTTGTAGGTTTTATCGACATTTCAGCCTGGAAGA TTAGCACATGATGTTATGAGGCCATACCAGCTTGAGTTATTATAGAGCTT GTTATGTTTGGCATCATACGTTTTGGGACCCTTACATTTTGTTCCTGATT ACTATTTTTCCACAATTTACTGTGTGCCTACGTAACGGTTCGCGGGTGCG TAGGTAAAGACCACGCTGTGCTACTTGTACATATATTTTTTGTAACCGCT CGTATTTTCGGTCTTCCGGACTGCAGTATCATACTGGGGATTGGTCTGTG ATGCGTTGATGAACACAACGCTAAATCACAAAAACGCGTGAGTGAAAAAC TTTGTTTTTCGTGAAACATGCTTACTAACAGGTTTCAAGCCTTTTCGTTA TACCCTAAAAAAAGGCCACCCCCCGGGCCCATAGCACCGCGTAATATCGT GTATCCAAACGGACGGTGTGTACACAGGTGATGCAAGATTCTCTTGGAGG AAATGCCAAGACCCTTATGTTCGTCAACATCTCGCCGGCGGACTACAACC AGGAGGAGACGGCAACGGCTCTCACGTACGCCACCCGCGTGAAACTGATC ACTAACACTGCCGAGAAGAAACGGGTGAGAGATCTGGTAACCCCCGACCA GGTCCCACCTAAACACGTGCACGGCCGAAAAATGGCGAGGACGGGCTTAG TGGCGCTTGCGCCATCAGCCAGACAACGTCCCTACCCTCTAGACAACGTG CCCTCTTTTTGTTTCGAGTATGGTGGCCTTCAAAAAGCTGAGCAATCGGG TAAGTCGCTAACCGATAGCCCTCCTAAGGGTGTCCCTTCTTCATATCACA CCCCCACCGCCACCATCACAATTGAGGTAGAAAGAAAAGGAAAAACGCCC TGAGTCACCTTTGGCAAAGTACATACAGGAAGGAAAGGTCGCCCGTCGGT GATCGATTCTGTGGGAACAGTGCTCCGTCCTCCCGAGGGCGCGCCGTCAA TGGCTAAGCAGCTACGGCACGCAAAACTTGAGTACGCCCCCCTCCCCCCC GCCCCCCTGAAGCTACGCTGCCAGCGCGCGGCGTACTTGGCGCCATTCGG AGGGGTCGGTTTTCACGTTTATTTCTGGGAAACAGAGGAGTTGTGGAGCA GGATTCAGACGTGACACAATAAAAGTCGCTCGCGAAGAGAATTCAACCCT AAAACCTGCCGAACGGCGTCAACTGTTGTGATGACCACCGAGCCTCTAGG GTGCTGGGCTAGAGGTCAACGTGATAGCCCTCGTAGGACTGACTATCCGT TCCATAGAGCGCGATGACAACCTAATAGTGTGTATTGCGCTCGTCTCGAA TTTATTGCATATTTTTTATCACACTGAAGATGTCCGAATGCGATTTTTCT GCATCGCACATCGCAGGACGGGGAGGAGGTGTCCCGACTCAAGGAAATCA TCCGCAGGCTGCAGGCGGGGGAG
back to top

Coding sequence (CDS) from alignment at S-dermatodea_contig963:11668..22190+

>mRNA_S-dermatodea_contig963.17644.1 ID=mRNA_S-dermatodea_contig963.17644.1|Name=mRNA_S-dermatodea_contig963.17644.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3012bp|location=Sequence derived from alignment at S-dermatodea_contig963:11668..22190+ (Saccorhiza dermatodea SderLu1190fm monoicous)
AAGCTCGAGGCCCAGGTGGCGAAGCTTGAGGCGCAGCTTGCTGCCGCGGT
CACCGCCAAGGTCTCGGCTGGGGATTCTGGCGGAGCAAAGGCCAAGGCAG
ACGTGAAGGCGTTGGAGACAAAATTGAAGAAGATGGGAGACGATTCCGAC
AGGAAGCAGCAGAAGCTCGAGGCCCAGGTGGCGAAGCTTGAGGCGCAGCT
TGCTGCCGCGGTCACCGCCAAGGTCTCGGCTGGGGATTCTGGCGGAGCAA
AGGCCAAGGCAGACGTGAAGGCGTTGGAGACAAAATTGAAGAAGATGGGA
GACGATTCCGACAGGAAGCAGCAGAAACTCGCGACTGAGTTAGATGCGGC
ATCGAAGGGCTGGGAGAGCTGCAAGGCCGAACTTGCTCAGGCGCGAAAAG
AGCGGGAGGCTCTGCGGCAGCAAAAACTCGCGACTGAGTTAGATGCGGCA
TCGAAGGGCTGGGAGAGCTGCAAGGCCGAACTTGCTCAGGCGCGAAAAGA
GCGGGAGGCTCTGCGGCAGCAAATGTCGGCGATGGGCACGATGGGCGAGG
AACTGCAGGAACTTCGGGCTCGCGCCGAGGAGGCAAAGGAAGTGCAGACG
CAGCTGGAGGTCGCCAATGGAGAGAATGTCCGACTCGAGGGTCTCTACCA
CGCCGAGCAGATGTCGGCGATGGGCACGATGGGCGAGGAACTGCAGGAAC
TTCGGGCTCGCGCCGAGGAGGCAAAGGAAGTGCAGACGCAGCTGGAGGTC
GCCAATGGAGAGAATGTCCGACTCGAGGGTCTCTACCACGCCGAGCAGGT
GCTCCGAAAGAAGTACTGGAACGCGATGGAGGACATGAAGGGAAAGATCA
GAGTGTTCGCGCGGTGCAGGCCATTCGCCCAGTGCTCCGAAAGAAGTACT
GGAACGCGATGGAGGACATGAAGGGAAAGATCAGAGTGTTCGCGCGGTGC
AGGCCATTCGCCCAGTACGAGCTCAGTCAAGACTGCAAGAGGGCTGTCCG
CCAATTGGACGAGGCCACGCTCGAGGTGGACGGGCACCACGGGGTAAAGC
AGTTCGTCTTCGACAGCGTGTTCTCGGAAGACAACACCCAGGAGGACATT
TTCGAGGATACCAAGAACCTGGTACAGTCCGCTCTTGACGGGTACGAGCT
CAGTCAAGACTGCAAGAGGGCTGTCCGCCAATTGGACGAGGCCACGCTCG
AGGTGGACGGGCACCACGGGGTAAAGCAGTTCGTCTTCGACAGCGTGTTC
TCGGAAGACAACACCCAGGAGGACATTTTCGAGGATACCAAGAACCTGGT
ACAGTCCGCTCTTGACGGGTTCAATGTCTGCGTGTTTGCGTACGGGCAGA
CCGGGTCGGGCAAGACGTGGACTATGACAGGCGGCACGGGGGAACTGCGC
GGTCTTACGCCGAGAGTGATCGAGGAGATCTTCGCCAGCATTGACAAGAC
CAAGGGATCCACAGAGGTTCAATGTCTGCGTGTTTGCGTACGGGCAGACC
GGGTCGGGCAAGACGTGGACTATGACAGGCGGCACGGGGGAACTGCGCGG
TCTTACGCCGAGAGTGATCGAGGAGATCTTCGCCAGCATTGACAAGACCA
AGGGATCCACAGAGGTGAAGGTGTCGTGCTACTTCATCGAGCTGTACCTC
GACCAACTCCGGGACCTGCTCTTCGCGATGGATCGCCCCAACGATGCTCC
ACCAAAACTCGAGGTTCACCTCGACGCCAATAAGATGGTCGTCGTAAAGA
ACGTCGTTATCAAGGCAAGGCTAAAAAGGGATTGTGAAGGTGTCGTGCTA
CTTCATCGAGCTGTACCTCGACCAACTCCGGGACCTGCTCTTCGCGATGG
ATCGCCCCAACGATGCTCCACCAAAACTCGAGGTTCACCTCGACGCCAAT
AAGATGGTCGTCGTAAAGAACGTCGTTATCAAGGCAAGGCTAAAAAGGGA
TTCGAACGACCTCACCAGTGTTTTTACGCAAGGAAACCGTCATCGTAAGG
TCGGCGGCACGAAGATGAATGCCGAGTCCAGCCGTTCTCACTCCGTCTTC
AGCATCCTGCTAGAGCGAACGACCTCACCAGTGTTTTTACGCAAGGAAAC
CGTCATCGTAAGGTCGGCGGCACGAAGATGAATGCCGAGTCCAGCCGTTC
TCACTCCGTCTTCAGCATCCTGCTAGAGGTCTACAACCGCACAACAAAGA
AGACCACGACGGGCAAGCTCTCGCTGGTTGATCTGGCGGGCTCGGAGAGG
GCTGATAAGACGGGCGCGACCTCGGACCGCCTGAAGGAGGCTCAGAGCAT
CAACAAGTCGCTGTCGGCGCTCGGGGACGTGATCTCGGCGCTCTCGAAGA
ACGAGAAGTTTATCCCTTACAGGAATAACAAGCTCACTCAGGTCTACAAC
CGCACAACAAAGAAGACCACGACGGGCAAGCTCTCGCTGGTTGATCTGGC
GGGCTCGGAGAGGGCTGATAAGACGGGCGCGACCTCGGACCGCCTGAAGG
AGGCTCAGAGCATCAACAAGTCGCTGTCGGCGCTCGGGGACGTGATCTCG
GCGCTCTCGAAGAACGAGAAGTTTATCCCTTACAGGAATAACAAGCTCAC
TCAGGTGATGCAAGATTCTCTTGGAGGAAATGCCAAGACCCTTATGTTCG
TCAACATCTCGCCGGCGGACTACAACCAGGAGGAGACGGCAACGGCTCTC
ACGTACGCCACCCGCGTGAAACTGATCACTAACACTGCCGAGAAGAAACG
GGTGATGCAAGATTCTCTTGGAGGAAATGCCAAGACCCTTATGTTCGTCA
ACATCTCGCCGGCGGACTACAACCAGGAGGAGACGGCAACGGCTCTCACG
TACGCCACCCGCGTGAAACTGATCACTAACACTGCCGAGAAGAAACGGGA
CGGGGAGGAGGTGTCCCGACTCAAGGAAATCATCCGCAGGCTGCAGGCGG
GGGAGGACGGGGAGGAGGTGTCCCGACTCAAGGAAATCATCCGCAGGCTG
CAGGCGGGGGAG
back to top