prot_S-dermatodea_contig9612.17628.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9612.17628.1
Unique Nameprot_S-dermatodea_contig9612.17628.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length60
Homology
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BLAST of mRNA_S-dermatodea_contig9612.17628.1 vs. uniprot
Match: D7FXZ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ5_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 3.500e-12
Identity = 32/52 (61.54%), Postives = 43/52 (82.69%), Query Frame = 0 
Query:    3 TGLAELLADPTAGPFTVFAPVDTSLKLIPGRVGIEADTDTLLTLLQFHVATG 54
            TGLAELL+DPTAGPFTVFAPVD++L+ + G + I + T++L  L++FHVA G
Sbjct:  968 TGLAELLSDPTAGPFTVFAPVDSALEQVAGLMTIASHTESLTKLVRFHVALG 1019
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BLAST of mRNA_S-dermatodea_contig9612.17628.1 vs. uniprot
Match: A0A6H5J734_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J734_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 4.270e-11
Identity = 32/57 (56.14%), Postives = 43/57 (75.44%), Query Frame = 0 
Query:    3 TGLAELLADPTAGPFTVFAPVDTSLKLIPGRVGIEADTDTLLTLLQFHVATGADAPA 59
            TGLAELL+D TAGPFTVFAPVD++L+ + G + I + T++L  L++FHVA G    A
Sbjct: 1309 TGLAELLSDRTAGPFTVFAPVDSALEQVAGLMTIASHTESLTKLVRFHVALGTATTA 1365
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BLAST of mRNA_S-dermatodea_contig9612.17628.1 vs. uniprot
Match: A0A7R9TBF8_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TBF8_9VIRI)

HSP 1 Score: 48.5 bits (114), Expect = 4.330e-5
Identity = 27/57 (47.37%), Postives = 31/57 (54.39%), Query Frame = 0 
Query:    4 GLAELLADPTAGPFTVFAPVDTSLKLIPGRVGIE-----ADTDTLLTLLQFHVATGA 55
            GL +   DPTAGPFTVFAP D +     G + I      AD  TL T+L  HV  GA
Sbjct:   75 GLVDTFDDPTAGPFTVFAPTDEAFATTLGALDIAPEALLADVPTLTTILTNHVVEGA 131
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BLAST of mRNA_S-dermatodea_contig9612.17628.1 vs. uniprot
Match: A0A8B8D476_CRAVI (periostin-like n=2 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8D476_CRAVI)

HSP 1 Score: 48.1 bits (113), Expect = 7.270e-5
Identity = 23/56 (41.07%), Postives = 33/56 (58.93%), Query Frame = 0 
Query:    1 TQTGLAELLADPTAGPFTVFAPVDTSLKLIPGRV--GIEADTDTLLTLLQFHVATG 54
            T  GLA++L DPT GPFT+ AP D +   +P     G++ D   L  +L++HV  G
Sbjct:   37 TSAGLADILRDPTQGPFTLLAPSDGAFAKVPADALQGLKTDNAKLQEVLKYHVMKG 92
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9612.17628.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FXZ5_ECTSI3.500e-1261.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J734_9PHAE4.270e-1156.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7R9TBF8_9VIRI4.330e-547.37Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
A0A8B8D476_CRAVI7.270e-541.07periostin-like n=2 Tax=Crassostrea virginica TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036378FAS1 domain superfamilyGENE3D2.30.180.10coord: 1..60
e-value: 1.9E-7
score: 33.2
IPR036378FAS1 domain superfamilySUPERFAMILY82153FAS1 domaincoord: 2..54
IPR000782FAS1 domainPFAMPF02469Fasciclincoord: 2..54
e-value: 5.3E-5
score: 23.4
IPR000782FAS1 domainPROSITEPS50213FAS1coord: 1..60
score: 12.287

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9612contigS-dermatodea_contig9612:8342..8521 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9612.17628.1mRNA_S-dermatodea_contig9612.17628.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9612 8342..8521 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9612.17628.1 ID=prot_S-dermatodea_contig9612.17628.1|Name=mRNA_S-dermatodea_contig9612.17628.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=60bp
TQTGLAELLADPTAGPFTVFAPVDTSLKLIPGRVGIEADTDTLLTLLQFH
VATGADAPAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036378FAS1_dom_sf
IPR000782FAS1_domain