mRNA_S-dermatodea_contig9577.17595.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
|
Overview
Homology
BLAST of mRNA_S-dermatodea_contig9577.17595.1 vs. uniprot
Match: D8LRI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRI4_ECTSI) HSP 1 Score: 194 bits (493), Expect = 2.180e-55 Identity = 98/104 (94.23%), Postives = 101/104 (97.12%), Query Frame = 1
Query: 1 EANPLLADKVLEGVVRVITLTGDRTGASRKADVLFKDRHWESIKRINCRGRFVPDTEVVQHQLAQQEVEGMAALSYEEYLRRLTQAVDTEVNTQLGEFTLRRHT 312
EANPLLADKVLEGVVRVITLTGDRTG SRK DVLFKDRHWESI+RINCRGRFVPDTEVV+HQLAQQE+EG AALSYEEYLRRLTQAVDTEVNTQLGEFTLRRHT
Sbjct: 1454 EANPLLADKVLEGVVRVITLTGDRTGLSRKTDVLFKDRHWESIQRINCRGRFVPDTEVVRHQLAQQELEGSAALSYEEYLRRLTQAVDTEVNTQLGEFTLRRHT 1557
BLAST of mRNA_S-dermatodea_contig9577.17595.1 vs. uniprot
Match: A0A835Z7Z7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Z7_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 1.000e-20 Identity = 52/97 (53.61%), Postives = 67/97 (69.07%), Query Frame = 1
Query: 22 DKVLEGVVRVITLTGDRTGASRKADVLFKDRHWESIKRINCRGRFVPDTEVVQHQLAQQEVEGMAA-LSYEEYLRRLTQAVDTEVNTQLGEFTLRRH 309
D V+EGV+RVITLTGDR A + D F +R W ++ R +C GRFVPD +VQ QLA ++ +SYE++LR TQ VD E+N QLGEFTL+RH
Sbjct: 2249 DDVMEGVIRVITLTGDRH-APQGDDTSFVNRQWTTMLRTDCIGRFVPDVALVQQQLADEQSGARHYHMSYEDWLRLTTQGVDVEINVQLGEFTLKRH 2344
BLAST of mRNA_S-dermatodea_contig9577.17595.1 vs. uniprot
Match: A0A7R9UG66_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UG66_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 2.540e-20 Identity = 50/102 (49.02%), Postives = 64/102 (62.75%), Query Frame = 1
Query: 7 NPLLADKVLEGVVRVITLTGDRTGASRKADVLFKDRHWESIKRINCRGRFVPDTEVVQHQLAQQEVEGMAALSYEEYLRRLT-QAVDTEVNTQLGEFTLRRH 309
NP +AD+ LE VVR++T TGDR + R W SI+R C GRF+PDTEV A V L+YEE+LR T +AVDTE+N QLGE+TL++H
Sbjct: 1044 NPSIADEALEAVVRIVTFTGDRNAPHDDHSGHLQARRWVSIQRQGCFGRFIPDTEVASLDEALDRVNSDGKLNYEEWLRATTTEAVDTEINVQLGEYTLKKH 1145
BLAST of mRNA_S-dermatodea_contig9577.17595.1 vs. uniprot
Match: W7TMJ4_9STRA (EF-Hand 1, calcium-binding site n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMJ4_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.750e-17 Identity = 49/106 (46.23%), Postives = 70/106 (66.04%), Query Frame = 1
Query: 1 EANPLLADKVLEGVVRVITLTGDRTGASRKADVLFKDRHWESIKRINCRGRFVPDTEVVQHQLAQQEVEGMAAL--SYEEYLRRLTQ-AVDTEVNTQLGEFTLRRH 309
+ANP D+V+E V+R +TLTG R K + K RHWES+ R C GRF+PDTE+ + + ++ A++ ++EE+LR T + DTEVNTQLGEFTL++H
Sbjct: 1059 QANPADCDEVMEAVIRTVTLTGKRD--IPKGEERMKSRHWESMTRQGCFGRFLPDTEL---KGVMEMIQNQASIHENFEEWLRATTTLSADTEVNTQLGEFTLKKH 1159
BLAST of mRNA_S-dermatodea_contig9577.17595.1 vs. uniprot
Match: A0A2R5FYY4_9STRA (Calmodulin n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FYY4_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 1.280e-12 Identity = 46/108 (42.59%), Postives = 68/108 (62.96%), Query Frame = 1
Query: 1 EANPLLADKVLEGVVRVITLTGDR-TGA---SRKADVLFKDRHWESIKRINCRGRFVPDTEVVQHQLAQQEVEGMAALSYEEYLRRLT-QAVDTEVNTQLGEFTLRRH 309
EANP +K +E +V+VI+LT +R TG S+ + R W+S + C GRF+PDTEV + + E + +EE++R +T Q+VDTE+N QLGEFTL++H
Sbjct: 1458 EANPADCNKTMEAIVKVISLTDERQTGMVTESKGDEDEMLIRSWQSPEIAGCLGRFMPDTEVSELRRCLSAAEEVR--DFEEWMRVVTTQSVDTEINVQLGEFTLKKH 1563
BLAST of mRNA_S-dermatodea_contig9577.17595.1 vs. uniprot
Match: A0A7S2PE02_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PE02_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 3.700e-11 Identity = 43/103 (41.75%), Postives = 63/103 (61.17%), Query Frame = 1
Query: 4 ANPLLADKVLEGVVRVITLTGDRTGASRKADVLFKDRHWESIKRINCRGRFVPDTEVVQHQLAQQEVEGMAALSYEEYLRRLT-QAVDTEVNTQLGEFTLRRH 309
+NP A++V E VVR+ T TG RT ++ +V+ R+W SIK C GRFVPDTE + + +YE+++ +T +AV TEVN Q+GEFT++ H
Sbjct: 148 SNPDDANEVFEAVVRLATGTGTRT-KTKDGEVMKGKRNWRSIKHPTCYGRFVPDTEDKNLRDGSYR-KPKPGQTYEQWMLEVTTRAVGTEVNVQIGEFTIQNH 248
BLAST of mRNA_S-dermatodea_contig9577.17595.1 vs. uniprot
Match: A0A0L0DVD2_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DVD2_THETB) HSP 1 Score: 66.6 bits (161), Expect = 1.370e-10 Identity = 40/103 (38.83%), Postives = 60/103 (58.25%), Query Frame = 1
Query: 7 NPLLADKVLEGVVRVITLTGDRTGASRKADVLFKDRHWESIKRINCRGRFVPDTEVVQHQLAQQEVEGMAALSYEEYLRRLT-QAVDTEVNTQLGEFTLRRHT 312
+P A+ +LE ++RV+T G + R+W S+ R C GRFVPDTE + + + SYE++LRR+T +V TE+N QLGEFTL+++T
Sbjct: 1205 HPPAANAILEAIIRVVTFAGSLAAVHDPSAP--PPRNWASLPRPFCSGRFVPDTE----DSLKASMAPLDGESYEDWLRRVTTDSVGTEINVQLGEFTLKKNT 1301
BLAST of mRNA_S-dermatodea_contig9577.17595.1 vs. uniprot
Match: A0A7S3JZH5_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZH5_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 4.760e-10 Identity = 48/134 (35.82%), Postives = 68/134 (50.75%), Query Frame = 1
Query: 1 EANPLLADKVLEGVVRVITLT-------------------GDRTGASRKADVLFK----------DRHWESIKRINCRGRFVPDTEVVQHQLAQQEVEGMAALSYEEYLRRLTQ-AVDTEVNTQLGEFTLRRHT 312
EA+P VLE +VR IT T R+G+ ++ V + +R W +++R +C GR+VPDTE + A A ++E +LRR+T AVDTEVN QLGEFTL++HT
Sbjct: 1544 EAHPAERSSVLEAIVRTITFTRQAEEESDDQALVSGKAVSSGRSGSGKEGAVAARRTTVSTSKLTERTWAAMERADCAGRYVPDTERIVVANANYV---NANENFETWLRRVTTTAVDTEVNAQLGEFTLKKHT 1674
BLAST of mRNA_S-dermatodea_contig9577.17595.1 vs. uniprot
Match: A0A0L0D658_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D658_THETB) HSP 1 Score: 63.2 bits (152), Expect = 2.260e-9 Identity = 42/108 (38.89%), Postives = 59/108 (54.63%), Query Frame = 1
Query: 19 ADKVLEGVVRVITLTGDRTGASRK-ADVLFKDRHWESIKRINCRGRFVPDTEVVQHQL----------AQQEVEGMAALSYEEYLRRLT-QAVDTEVNTQLGEFTLRR 306
A+ V+E ++RV+T G ++ + R W S+ R C GRFVPDTEV + L A + A SY E+LRR+T + V TE+N QLGEFTL++
Sbjct: 1352 ANLVMETIIRVMTFKGSLLEMEKQMVEANLSLRSWSSLTRTGCYGRFVPDTEVSELALNSAAPLVAEPASDPLRAPFAESYVEWLRRITTKEVVTEINVQLGEFTLKK 1459
BLAST of mRNA_S-dermatodea_contig9577.17595.1 vs. uniprot
Match: A0A7S1XZY9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZY9_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 6.010e-9 Identity = 28/60 (46.67%), Postives = 39/60 (65.00%), Query Frame = 1
Query: 7 NPLLADKVLEGVVRVITLTGDRTGASRKA----DVLFKDRHWESIKRINCRGRFVPDTEV 174
NP +D+ LE VVR++T TG+R G++ V F RHW +++R C GRF+PDTEV
Sbjct: 104 NPETSDEALEAVVRIVTFTGNRNGSTTSDPANHSVRFSARHWVTMQRQGCFGRFIPDTEV 163 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9577.17595.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9577.17595.1 >prot_S-dermatodea_contig9577.17595.1 ID=prot_S-dermatodea_contig9577.17595.1|Name=mRNA_S-dermatodea_contig9577.17595.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=104bp EANPLLADKVLEGVVRVITLTGDRTGASRKADVLFKDRHWESIKRINCRGback to top mRNA from alignment at S-dermatodea_contig9577:4599..5883- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9577.17595.1 ID=mRNA_S-dermatodea_contig9577.17595.1|Name=mRNA_S-dermatodea_contig9577.17595.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1285bp|location=Sequence derived from alignment at S-dermatodea_contig9577:4599..5883- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9577:4599..5883- >mRNA_S-dermatodea_contig9577.17595.1 ID=mRNA_S-dermatodea_contig9577.17595.1|Name=mRNA_S-dermatodea_contig9577.17595.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=624bp|location=Sequence derived from alignment at S-dermatodea_contig9577:4599..5883- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |