mRNA_S-dermatodea_contig9571.17594.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9571.17594.1 vs. uniprot
Match: D8LCC2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCC2_ECTSI) HSP 1 Score: 328 bits (842), Expect = 5.540e-107 Identity = 151/225 (67.11%), Postives = 178/225 (79.11%), Query Frame = 1
Query: 1 QILTALAWTVNMKATFAGGRLDGSSRGVPSTPRPVSFFTPASWAFTIWAPIFLGEALFVQFQILPLPSIRGSWWLSDVSPWFACAMLFQTLWCLSFRPWARDAGLLWLPALLLGGAAFALGGAHSVLREAWFARDMDLPGYLLVNLPISLHFGWLSCASLVSANGFLGSVARLSNGVKLSFSLLSVCAAVALAASITLIREDPIFAAVVAWALWAVGSPDGWGSL 675
Q+L A AW +NM+ATF GGRLDG + S RPV F +PA WAF IW PIF GEA++V FQ++PLPSIRGSWWLSD+SPWFA AMLFQ LWC SFRPWARD+GLLWLPALLLGG ALGG H +LREAWF DM + YL V++P+SLH GW+SCA+LV+ NG+ ++ +LSN VKL +L SV AAVAL +ITL+REDPI+AAVVAWALWAVGSP GW L
Sbjct: 311 QVLAASAWALNMRATFGGGRLDGIGQSGSSGTRPVRFLSPAGWAFAIWGPIFFGEAIYVAFQLMPLPSIRGSWWLSDISPWFAGAMLFQALWCFSFRPWARDSGLLWLPALLLGGTGVALGGVHRILREAWFTSDMTVLQYLAVHVPLSLHLGWISCATLVNLNGYFATINKLSNRVKLGLALGSVVAAVALGVAITLLREDPIYAAVVAWALWAVGSPAGWDEL 535
BLAST of mRNA_S-dermatodea_contig9571.17594.1 vs. uniprot
Match: D7FS55_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS55_ECTSI) HSP 1 Score: 229 bits (584), Expect = 6.860e-72 Identity = 118/228 (51.75%), Postives = 150/228 (65.79%), Query Frame = 1
Query: 1 QILTALAWTVNMKATFAGGRLDGSSRGVPSTPRP--VSFFTPASWAFTIWAPIFLGEALFVQFQILPLPSIRGS-WWLSDVSPWFACAMLFQTLWCLSFRPWARDAGLLWLPALLLGGAAFALGGAHSVLREAWFARDMDLPGYLLVNLPISLHFGWLSCASLVSANGFLGSVARLSNGVKLSFSLLSVCAAVALAASITLIREDPIFAAVVAWALWAVGSPDGWGSL 675
Q+LT +W +N A AGGRLDG P + V +F PA WAF+IW PIFLGEA +Q LPL + + WLS +SPW + A L Q+ WCLSFR WARD+GLLW PA LLGG A LGGAH V+R A A +M Y LV+LP+SLHFGW+SCA+LV+ N ++ S+ S+ KL+FSL S+ +AV LA ++T DP++A VVAWAL AV S GW +
Sbjct: 51 QVLTLTSWAINTAAVSAGGRLDGPEPEDPKDAKLPLVRYFMPAGWAFSIWGPIFLGEAALAVYQTLPLEGVSAAAGWLSKLSPWLSSAFLVQSCWCLSFREWARDSGLLWFPAALLGGTAACLGGAHHVVRGALAAGEMSNLQYGLVHLPVSLHFGWVSCATLVNFNNYI-SLLPFSDKGKLNFSLASIASAVGLAVAVTGTTGDPVYAGVVAWALSAVASEKGWAKM 277
BLAST of mRNA_S-dermatodea_contig9571.17594.1 vs. uniprot
Match: A0A835Z9R9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9R9_9STRA) HSP 1 Score: 224 bits (572), Expect = 9.290e-70 Identity = 113/227 (49.78%), Postives = 151/227 (66.52%), Query Frame = 1
Query: 1 QILTALAWTVNMKATFAGGRLDGSSRGVPSTPRPVSFFTPASWAFTIWAPIFLGEALFVQFQILPLPSIRGSWWLSDVSPWFACAMLFQTLWCLSFRPWARDAGL--LWLPALLLGGAAFALGGAHSVLREAWFARDMDLPGYLLVNLPISLHFGWLSCASLVSANGFLGSVARLSNGVKLSFSLLSVCAAVALAASITLIREDPIFAAVVAWALWAVGSPDGWGSL 675
Q+L A+ + +N A GRLDG + + +F PA WAF IWAPIF GE LFV +Q LPL +R SWWL+++SP+F+ AML QTLWC +FRPWAR AGL W+PALLLG A ALGGAH +L +A ++ Y L +P++LHFGWL+ A+LV+ANGF+ + A S+ VK S ++ S+ AV + A++T R DPI+AAV+AWAL A+ WG L
Sbjct: 39 QVLNAVTYLLNFAAVRVPGRLDGRQWSQDAATQQ-RYFAPAGWAFAIWAPIFAGELLFVIYQALPLARVRTSWWLAELSPYFSGAMLLQTLWCGAFRPWARAAGLNLQWIPALLLGLGAAALGGAHGILVQALEDSELSPLSYALAFVPLALHFGWLTAAALVNANGFVAAAAPRSHAVKASAAIASIYLAVLVGAAVTFARRDPIYAAVIAWALAAIADEAAWGKL 264
BLAST of mRNA_S-dermatodea_contig9571.17594.1 vs. uniprot
Match: A0A7S2UXB1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXB1_9STRA) HSP 1 Score: 209 bits (531), Expect = 1.850e-63 Identity = 108/225 (48.00%), Postives = 144/225 (64.00%), Query Frame = 1
Query: 1 QILTALAWTVNMKATFAGGRLDGSSRGVPSTPRPVSFFTPASWAFTIWAPIFLGEALFVQFQILPLPSIRGSWWLSDVSPWFACAMLFQTLWCLSFRPWARDAGLLWLPALLLGGAAFALGGAHSVLREAWFARDMDLPGYLLVNLPISLHFGWLSCASLVSANGFLGSVARLSNGVKLSFSLLSVCAAVALAASITLIREDPIFAAVVAWALWAVGSPDGWGSL 675
QIL LAW +NM A GRLDGS S + FFTPA WAF IW PIFLGEALF FQ+LP+ +++ S+ + ++ W+ A+ Q+LWC +FRPWA+ +G LWLPA LL A ALGGAH VL +A + ++ + Y++VN+P++LHFGW++ ASLVS NG+L SV S +K S S+ A V AA + R +P + VV+WAL AV GW L
Sbjct: 59 QILNILAWALNMWAVSVPGRLDGSQAAALSDEGEIRFFTPAGWAFAIWGPIFLGEALFAFFQLLPIETVQTSF-IPKLTVWWIPAVACQSLWCSAFRPWAKKSGFLWLPAALLTLTAVALGGAHKVLFDALHSEEVSMLEYIIVNIPLTLHFGWITAASLVSWNGYLASVTA-SISIKSLASSASIVAGVIAAALVGWNRIEPFYPLVVSWALAAVADKKGWSQL 281
BLAST of mRNA_S-dermatodea_contig9571.17594.1 vs. uniprot
Match: A0A4D9D883_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D883_9STRA) HSP 1 Score: 167 bits (423), Expect = 2.400e-46 Identity = 96/219 (43.84%), Postives = 132/219 (60.27%), Query Frame = 1
Query: 1 QILTALAWTVNMKATFAGGRLDGSSRGVPSTPRPVSFFTPASWAFTIWAPIFLGEALFVQFQILP---LPSIRGSWWLSDVSPWFACAMLFQTLWCLSFRPWARDAGLLWLPALLLGGAAFALGGAHSVLREAWFARDMDLPGYLLVNLPISLHFGWLSCASLVSANGFLGSVARLSNGVKLSFSLLSVCAAVALAASITLIREDPIFAAVVAWALWAV 648
Q+L LAW N A GR DG S + PV FFTP+++AF IWAPIFLGE L +Q+ P+++ +L+ ++P A A Q+LWC++FRPW + ++P+ LL A L H+VLREA A M YL+V+LP+SLHFGW++CA+LV+ NG+ L G KL +L S+ AV L + +TL DP+ A VVAWAL+AV
Sbjct: 117 QVLILLAWLTNKIAVRIPGRSDGKS-WKDAMSSPVRFFTPSAYAFAIWAPIFLGEFLLTFYQLASSRLAPALQP--YLARLAPPLAQAFAAQSLWCVAFRPWVGR--MQFVPSALLAMTAVGLSRVHTVLREAVAAGAMRPWDYLIVHLPLSLHFGWITCATLVNLNGWFAVAPTLRTGDKLGLALASINVAVTLGSQVTLASGDPVIALVVAWALYAV 330
BLAST of mRNA_S-dermatodea_contig9571.17594.1 vs. uniprot
Match: A0A7S0WI04_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WI04_9CHLO) HSP 1 Score: 151 bits (381), Expect = 1.040e-40 Identity = 84/233 (36.05%), Postives = 133/233 (57.08%), Query Frame = 1
Query: 1 QILTALAWTVNMKATFAGGRLDG---SSRGVPSTPRPVSFFTPASWAFTIWAPIFLGEALFVQFQILPLPSIRGSWWLSDVSPWFACAMLFQTLWCLSFRPWARDAGLLWLPALLLGGAAFALGGAHSVLRE------AWFARDMDLPGYLLVNLPISLHFGWLSCASLVSANGFLGSV---ARLSNGVKLSFSLLSVCAAVALAASITLIREDPIFAAVVAWALWAVGSPDG 663
Q++ A A+ N+ A +GGR+D ++ GVP + S TP+ WAF IW I+L E++F Q+LP S+ WL DVSPW+ A ++Q+LWC +FR WAR +G+ W+ A LL A AL GA +V+ +W A + L +P+SLHFGW++ ASLV+ N F + A +S ++ + S+ A + + + ++R D +++ +AWAL A+ + G
Sbjct: 76 QVVNAAAFCPNVWAVSSGGRIDSRYANTNGVPPSDEYRSLVTPSGWAFAIWGVIYLTESIFTVVQLLP--SMTDVTWLLDVSPWWVAANIYQSLWCAAFRDWARPSGVFWISAALLTATAIALAGAEAVVTGPSVGTGSWTAVGQRV----LAQMPLSLHFGWVTAASLVNWNSFFAVLYRDAHISLRTQIWLAFASLHLAYIVGSIVAVVRMDFLYSLTLAWALTAIKTDKG 302
BLAST of mRNA_S-dermatodea_contig9571.17594.1 vs. uniprot
Match: A0A7S2UVR2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVR2_9STRA) HSP 1 Score: 145 bits (366), Expect = 5.370e-38 Identity = 78/222 (35.14%), Postives = 123/222 (55.41%), Query Frame = 1
Query: 1 QILTALAWTVNMKATFAGGRLDGSSRGVPSTPRPVSFFTPASWAFTIWAPIFLGEALFVQFQILPLPSIRGSWWLSDVSPWFACAMLFQTLWCLSFRPWARDAGLLWLPALLLGGAAFALGGAHSVLREAWFARDMDLPGYLLVNLPISLHFGWLSCASLVSANGFLGSVARLSNGVKLSFSLLSVCAAVALAASITLIREDPIFAAVVAWALWAVGSPDGW 666
Q+ LA+ + GRLD + P+ + FTPA WA TIWAPI +GEA+F +Q LPL ++ S ++ ++ F AML Q +WCL RP+ + + WL +L+ A+ L + A + +M++ Y+L+++P++LHF W++ SLV+ NG+L R K++F+ LS AA+ L A + R +P A VV+WAL + GW
Sbjct: 118 QLFAILAFLGSAFCGTIPGRLDQMRHEIGWRPKKIELFTPAPWALTIWAPILIGEAIFAVYQALPLDIVQSSVFIPLLTVPFVGAMLCQMIWCLVNRPFIKKSSFGWLSPVLITLGAYCLNLCSLINYRALHSDEMNIIEYVLISIPLTLHFAWMTIKSLVAWNGWLAIFDREFPKTKVAFAGLSALAAIVLGAYFAIERTEPFVALVVSWALAGIADRRGW 339
BLAST of mRNA_S-dermatodea_contig9571.17594.1 vs. uniprot
Match: A0A090N4T8_OSTTA (Unnamed product n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090N4T8_OSTTA) HSP 1 Score: 142 bits (358), Expect = 1.200e-37 Identity = 85/237 (35.86%), Postives = 124/237 (52.32%), Query Frame = 1
Query: 1 QILTALAWTVNMKATFAGGRLDGS----------------SRGVPSTPRPVSFFTPASWAFTIWAPIFLGEALFVQFQILPLPSIRGSWWLSDVSPWFACAMLFQTLWCLSFRPWARDAGLLWLPALLLGGAAFALGGAHSVLREAWFARDMDLPGYLLVNLPISLHFGWLSCASLVSANGFLGSVARLSNGVKLSFSLLSVCAAVALAASITLIREDPIFAAVVAWALWAVGSPDG 663
+++ ALA+ VN+ + A GR+DG + GVP S FTPA WAF IW I+ GE +L G ++ +P++A A Q+LWC++FRPWA+ W+ + LL AFALGGA LR A + + +P+SLHFGW+SCA+LV+ N + + +++F+ LS A AL A +++ D ++ AVVAWAL AV S G
Sbjct: 46 KVVVALAYGVNVASVSAPGRIDGEMQKRAAEAKRAKPEEKAHGVPLDSEFRSLFTPAGWAFAIWGVIYAGEMAMTAHALL-----GGDERVAAAAPYWAVACGLQSLWCVAFRPWAKKPRHFWVSSALLITEAFALGGATRALRGAGSISPSEAL-FWTTRVPLSLHFGWISCAALVNVNSHVAKTCAIDT--QIAFAFLSAFGASALGAGVSVFSGDAVYGAVVAWALAAVASDGG 274
BLAST of mRNA_S-dermatodea_contig9571.17594.1 vs. uniprot
Match: A0A6V1K7Z9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1K7Z9_HETAK) HSP 1 Score: 142 bits (358), Expect = 5.040e-37 Identity = 83/229 (36.24%), Postives = 120/229 (52.40%), Query Frame = 1
Query: 1 QILTALAWTVNMKATFAGGRLDGSS-RGVPSTPRPVS-FFTPASWAFTIWAPIFLGEALFVQFQILPLPSIRGSWWLSDVSPWFACAMLFQTLWCLSFRPWARDAGLLWLPALLLGGAAFALGGAHSVLREA--WFARDMDLPGYLLVNLPISLHFGWLSCASLVSANGFLGSVARLSNGVKLSFSLLSVCAAVALAASITLIREDPIFAAVVAWALWAVGSPDGWGSL 675
Q+L + N A GR+D R S + V+ FFTPA WAF IW PIF+GE +FV +Q LP+ I+ +L+ +SP++ A+ FQ++W RPWA + G W+ A LL AL G H V+ D+++ +++ +P+SLHFGW+ A LVS NG L L+ K FS SV A + + R DP+ A ++WAL + W L
Sbjct: 99 QVLNTFIFLFNRWAGKRPGRMDMKQPRAEASQKKEVARFFTPAGWAFRIWIPIFIGETIFVFYQALPINYIKNKDFLAMLSPFWIAAIGFQSIWTFCARPWAVENGYGWIQAALLVLTGVALSGVHKVMTSQPHTLVGDLNILDFIVAQIPLSLHFGWMMAAGLVSVNGVLART-PLTIRAKHLFSDASVVVATVIGVVVAAKRTDPVVAFALSWALAGLADDKAWEKL 326
BLAST of mRNA_S-dermatodea_contig9571.17594.1 vs. uniprot
Match: A0A1Y5IB82_OSTTA (Uncharacterized protein n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IB82_OSTTA) HSP 1 Score: 142 bits (358), Expect = 3.030e-35 Identity = 85/237 (35.86%), Postives = 124/237 (52.32%), Query Frame = 1
Query: 1 QILTALAWTVNMKATFAGGRLDGS----------------SRGVPSTPRPVSFFTPASWAFTIWAPIFLGEALFVQFQILPLPSIRGSWWLSDVSPWFACAMLFQTLWCLSFRPWARDAGLLWLPALLLGGAAFALGGAHSVLREAWFARDMDLPGYLLVNLPISLHFGWLSCASLVSANGFLGSVARLSNGVKLSFSLLSVCAAVALAASITLIREDPIFAAVVAWALWAVGSPDG 663
+++ ALA+ VN+ + A GR+DG + GVP S FTPA WAF IW I+ GE +L G ++ +P++A A Q+LWC++FRPWA+ W+ + LL AFALGGA LR A + + +P+SLHFGW+SCA+LV+ N + + +++F+ LS A AL A +++ D ++ AVVAWAL AV S G
Sbjct: 343 KVVVALAYGVNVASVSAPGRIDGEMQKRAAEAKRAKPEEKAHGVPLDSEFRSLFTPAGWAFAIWGVIYAGEMAMTAHALL-----GGDERVAAAAPYWAVACGLQSLWCVAFRPWAKKPRHFWVSSALLITEAFALGGATRALRGAGSISPSEAL-FWTTRVPLSLHFGWISCAALVNVNSHVAKTCAIDT--QIAFAFLSAFGASALGAGVSVFSGDAVYGAVVAWALAAVASDGG 571 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9571.17594.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9571.17594.1 >prot_S-dermatodea_contig9571.17594.1 ID=prot_S-dermatodea_contig9571.17594.1|Name=mRNA_S-dermatodea_contig9571.17594.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=225bp QILTALAWTVNMKATFAGGRLDGSSRGVPSTPRPVSFFTPASWAFTIWAPback to top mRNA from alignment at S-dermatodea_contig9571:6224..8213- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9571.17594.1 ID=mRNA_S-dermatodea_contig9571.17594.1|Name=mRNA_S-dermatodea_contig9571.17594.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1990bp|location=Sequence derived from alignment at S-dermatodea_contig9571:6224..8213- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9571:6224..8213- >mRNA_S-dermatodea_contig9571.17594.1 ID=mRNA_S-dermatodea_contig9571.17594.1|Name=mRNA_S-dermatodea_contig9571.17594.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1350bp|location=Sequence derived from alignment at S-dermatodea_contig9571:6224..8213- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |