mRNA_S-dermatodea_contig9571.17594.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9571.17594.1
Unique NamemRNA_S-dermatodea_contig9571.17594.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig9571.17594.1 vs. uniprot
Match: D8LCC2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCC2_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 5.540e-107
Identity = 151/225 (67.11%), Postives = 178/225 (79.11%), Query Frame = 1
Query:    1 QILTALAWTVNMKATFAGGRLDGSSRGVPSTPRPVSFFTPASWAFTIWAPIFLGEALFVQFQILPLPSIRGSWWLSDVSPWFACAMLFQTLWCLSFRPWARDAGLLWLPALLLGGAAFALGGAHSVLREAWFARDMDLPGYLLVNLPISLHFGWLSCASLVSANGFLGSVARLSNGVKLSFSLLSVCAAVALAASITLIREDPIFAAVVAWALWAVGSPDGWGSL 675
            Q+L A AW +NM+ATF GGRLDG  +   S  RPV F +PA WAF IW PIF GEA++V FQ++PLPSIRGSWWLSD+SPWFA AMLFQ LWC SFRPWARD+GLLWLPALLLGG   ALGG H +LREAWF  DM +  YL V++P+SLH GW+SCA+LV+ NG+  ++ +LSN VKL  +L SV AAVAL  +ITL+REDPI+AAVVAWALWAVGSP GW  L
Sbjct:  311 QVLAASAWALNMRATFGGGRLDGIGQSGSSGTRPVRFLSPAGWAFAIWGPIFFGEAIYVAFQLMPLPSIRGSWWLSDISPWFAGAMLFQALWCFSFRPWARDSGLLWLPALLLGGTGVALGGVHRILREAWFTSDMTVLQYLAVHVPLSLHLGWISCATLVNLNGYFATINKLSNRVKLGLALGSVVAAVALGVAITLLREDPIYAAVVAWALWAVGSPAGWDEL 535          
BLAST of mRNA_S-dermatodea_contig9571.17594.1 vs. uniprot
Match: D7FS55_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS55_ECTSI)

HSP 1 Score: 229 bits (584), Expect = 6.860e-72
Identity = 118/228 (51.75%), Postives = 150/228 (65.79%), Query Frame = 1
Query:    1 QILTALAWTVNMKATFAGGRLDGSSRGVPSTPRP--VSFFTPASWAFTIWAPIFLGEALFVQFQILPLPSIRGS-WWLSDVSPWFACAMLFQTLWCLSFRPWARDAGLLWLPALLLGGAAFALGGAHSVLREAWFARDMDLPGYLLVNLPISLHFGWLSCASLVSANGFLGSVARLSNGVKLSFSLLSVCAAVALAASITLIREDPIFAAVVAWALWAVGSPDGWGSL 675
            Q+LT  +W +N  A  AGGRLDG     P   +   V +F PA WAF+IW PIFLGEA    +Q LPL  +  +  WLS +SPW + A L Q+ WCLSFR WARD+GLLW PA LLGG A  LGGAH V+R A  A +M    Y LV+LP+SLHFGW+SCA+LV+ N ++ S+   S+  KL+FSL S+ +AV LA ++T    DP++A VVAWAL AV S  GW  +
Sbjct:   51 QVLTLTSWAINTAAVSAGGRLDGPEPEDPKDAKLPLVRYFMPAGWAFSIWGPIFLGEAALAVYQTLPLEGVSAAAGWLSKLSPWLSSAFLVQSCWCLSFREWARDSGLLWFPAALLGGTAACLGGAHHVVRGALAAGEMSNLQYGLVHLPVSLHFGWVSCATLVNFNNYI-SLLPFSDKGKLNFSLASIASAVGLAVAVTGTTGDPVYAGVVAWALSAVASEKGWAKM 277          
BLAST of mRNA_S-dermatodea_contig9571.17594.1 vs. uniprot
Match: A0A835Z9R9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9R9_9STRA)

HSP 1 Score: 224 bits (572), Expect = 9.290e-70
Identity = 113/227 (49.78%), Postives = 151/227 (66.52%), Query Frame = 1
Query:    1 QILTALAWTVNMKATFAGGRLDGSSRGVPSTPRPVSFFTPASWAFTIWAPIFLGEALFVQFQILPLPSIRGSWWLSDVSPWFACAMLFQTLWCLSFRPWARDAGL--LWLPALLLGGAAFALGGAHSVLREAWFARDMDLPGYLLVNLPISLHFGWLSCASLVSANGFLGSVARLSNGVKLSFSLLSVCAAVALAASITLIREDPIFAAVVAWALWAVGSPDGWGSL 675
            Q+L A+ + +N  A    GRLDG      +  +   +F PA WAF IWAPIF GE LFV +Q LPL  +R SWWL+++SP+F+ AML QTLWC +FRPWAR AGL   W+PALLLG  A ALGGAH +L +A    ++    Y L  +P++LHFGWL+ A+LV+ANGF+ + A  S+ VK S ++ S+  AV + A++T  R DPI+AAV+AWAL A+     WG L
Sbjct:   39 QVLNAVTYLLNFAAVRVPGRLDGRQWSQDAATQQ-RYFAPAGWAFAIWAPIFAGELLFVIYQALPLARVRTSWWLAELSPYFSGAMLLQTLWCGAFRPWARAAGLNLQWIPALLLGLGAAALGGAHGILVQALEDSELSPLSYALAFVPLALHFGWLTAAALVNANGFVAAAAPRSHAVKASAAIASIYLAVLVGAAVTFARRDPIYAAVIAWALAAIADEAAWGKL 264          
BLAST of mRNA_S-dermatodea_contig9571.17594.1 vs. uniprot
Match: A0A7S2UXB1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXB1_9STRA)

HSP 1 Score: 209 bits (531), Expect = 1.850e-63
Identity = 108/225 (48.00%), Postives = 144/225 (64.00%), Query Frame = 1
Query:    1 QILTALAWTVNMKATFAGGRLDGSSRGVPSTPRPVSFFTPASWAFTIWAPIFLGEALFVQFQILPLPSIRGSWWLSDVSPWFACAMLFQTLWCLSFRPWARDAGLLWLPALLLGGAAFALGGAHSVLREAWFARDMDLPGYLLVNLPISLHFGWLSCASLVSANGFLGSVARLSNGVKLSFSLLSVCAAVALAASITLIREDPIFAAVVAWALWAVGSPDGWGSL 675
            QIL  LAW +NM A    GRLDGS     S    + FFTPA WAF IW PIFLGEALF  FQ+LP+ +++ S+ +  ++ W+  A+  Q+LWC +FRPWA+ +G LWLPA LL   A ALGGAH VL +A  + ++ +  Y++VN+P++LHFGW++ ASLVS NG+L SV   S  +K   S  S+ A V  AA +   R +P +  VV+WAL AV    GW  L
Sbjct:   59 QILNILAWALNMWAVSVPGRLDGSQAAALSDEGEIRFFTPAGWAFAIWGPIFLGEALFAFFQLLPIETVQTSF-IPKLTVWWIPAVACQSLWCSAFRPWAKKSGFLWLPAALLTLTAVALGGAHKVLFDALHSEEVSMLEYIIVNIPLTLHFGWITAASLVSWNGYLASVTA-SISIKSLASSASIVAGVIAAALVGWNRIEPFYPLVVSWALAAVADKKGWSQL 281          
BLAST of mRNA_S-dermatodea_contig9571.17594.1 vs. uniprot
Match: A0A4D9D883_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D883_9STRA)

HSP 1 Score: 167 bits (423), Expect = 2.400e-46
Identity = 96/219 (43.84%), Postives = 132/219 (60.27%), Query Frame = 1
Query:    1 QILTALAWTVNMKATFAGGRLDGSSRGVPSTPRPVSFFTPASWAFTIWAPIFLGEALFVQFQILP---LPSIRGSWWLSDVSPWFACAMLFQTLWCLSFRPWARDAGLLWLPALLLGGAAFALGGAHSVLREAWFARDMDLPGYLLVNLPISLHFGWLSCASLVSANGFLGSVARLSNGVKLSFSLLSVCAAVALAASITLIREDPIFAAVVAWALWAV 648
            Q+L  LAW  N  A    GR DG S    +   PV FFTP+++AF IWAPIFLGE L   +Q+      P+++   +L+ ++P  A A   Q+LWC++FRPW     + ++P+ LL   A  L   H+VLREA  A  M    YL+V+LP+SLHFGW++CA+LV+ NG+      L  G KL  +L S+  AV L + +TL   DP+ A VVAWAL+AV
Sbjct:  117 QVLILLAWLTNKIAVRIPGRSDGKS-WKDAMSSPVRFFTPSAYAFAIWAPIFLGEFLLTFYQLASSRLAPALQP--YLARLAPPLAQAFAAQSLWCVAFRPWVGR--MQFVPSALLAMTAVGLSRVHTVLREAVAAGAMRPWDYLIVHLPLSLHFGWITCATLVNLNGWFAVAPTLRTGDKLGLALASINVAVTLGSQVTLASGDPVIALVVAWALYAV 330          
BLAST of mRNA_S-dermatodea_contig9571.17594.1 vs. uniprot
Match: A0A7S0WI04_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WI04_9CHLO)

HSP 1 Score: 151 bits (381), Expect = 1.040e-40
Identity = 84/233 (36.05%), Postives = 133/233 (57.08%), Query Frame = 1
Query:    1 QILTALAWTVNMKATFAGGRLDG---SSRGVPSTPRPVSFFTPASWAFTIWAPIFLGEALFVQFQILPLPSIRGSWWLSDVSPWFACAMLFQTLWCLSFRPWARDAGLLWLPALLLGGAAFALGGAHSVLRE------AWFARDMDLPGYLLVNLPISLHFGWLSCASLVSANGFLGSV---ARLSNGVKLSFSLLSVCAAVALAASITLIREDPIFAAVVAWALWAVGSPDG 663
            Q++ A A+  N+ A  +GGR+D    ++ GVP +    S  TP+ WAF IW  I+L E++F   Q+LP  S+    WL DVSPW+  A ++Q+LWC +FR WAR +G+ W+ A LL   A AL GA +V+        +W A    +    L  +P+SLHFGW++ ASLV+ N F   +   A +S   ++  +  S+  A  + + + ++R D +++  +AWAL A+ +  G
Sbjct:   76 QVVNAAAFCPNVWAVSSGGRIDSRYANTNGVPPSDEYRSLVTPSGWAFAIWGVIYLTESIFTVVQLLP--SMTDVTWLLDVSPWWVAANIYQSLWCAAFRDWARPSGVFWISAALLTATAIALAGAEAVVTGPSVGTGSWTAVGQRV----LAQMPLSLHFGWVTAASLVNWNSFFAVLYRDAHISLRTQIWLAFASLHLAYIVGSIVAVVRMDFLYSLTLAWALTAIKTDKG 302          
BLAST of mRNA_S-dermatodea_contig9571.17594.1 vs. uniprot
Match: A0A7S2UVR2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVR2_9STRA)

HSP 1 Score: 145 bits (366), Expect = 5.370e-38
Identity = 78/222 (35.14%), Postives = 123/222 (55.41%), Query Frame = 1
Query:    1 QILTALAWTVNMKATFAGGRLDGSSRGVPSTPRPVSFFTPASWAFTIWAPIFLGEALFVQFQILPLPSIRGSWWLSDVSPWFACAMLFQTLWCLSFRPWARDAGLLWLPALLLGGAAFALGGAHSVLREAWFARDMDLPGYLLVNLPISLHFGWLSCASLVSANGFLGSVARLSNGVKLSFSLLSVCAAVALAASITLIREDPIFAAVVAWALWAVGSPDGW 666
            Q+   LA+  +       GRLD     +   P+ +  FTPA WA TIWAPI +GEA+F  +Q LPL  ++ S ++  ++  F  AML Q +WCL  RP+ + +   WL  +L+   A+ L     +   A  + +M++  Y+L+++P++LHF W++  SLV+ NG+L    R     K++F+ LS  AA+ L A   + R +P  A VV+WAL  +    GW
Sbjct:  118 QLFAILAFLGSAFCGTIPGRLDQMRHEIGWRPKKIELFTPAPWALTIWAPILIGEAIFAVYQALPLDIVQSSVFIPLLTVPFVGAMLCQMIWCLVNRPFIKKSSFGWLSPVLITLGAYCLNLCSLINYRALHSDEMNIIEYVLISIPLTLHFAWMTIKSLVAWNGWLAIFDREFPKTKVAFAGLSALAAIVLGAYFAIERTEPFVALVVSWALAGIADRRGW 339          
BLAST of mRNA_S-dermatodea_contig9571.17594.1 vs. uniprot
Match: A0A090N4T8_OSTTA (Unnamed product n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090N4T8_OSTTA)

HSP 1 Score: 142 bits (358), Expect = 1.200e-37
Identity = 85/237 (35.86%), Postives = 124/237 (52.32%), Query Frame = 1
Query:    1 QILTALAWTVNMKATFAGGRLDGS----------------SRGVPSTPRPVSFFTPASWAFTIWAPIFLGEALFVQFQILPLPSIRGSWWLSDVSPWFACAMLFQTLWCLSFRPWARDAGLLWLPALLLGGAAFALGGAHSVLREAWFARDMDLPGYLLVNLPISLHFGWLSCASLVSANGFLGSVARLSNGVKLSFSLLSVCAAVALAASITLIREDPIFAAVVAWALWAVGSPDG 663
            +++ ALA+ VN+ +  A GR+DG                 + GVP      S FTPA WAF IW  I+ GE       +L      G   ++  +P++A A   Q+LWC++FRPWA+     W+ + LL   AFALGGA   LR A      +   +    +P+SLHFGW+SCA+LV+ N  +     +    +++F+ LS   A AL A +++   D ++ AVVAWAL AV S  G
Sbjct:   46 KVVVALAYGVNVASVSAPGRIDGEMQKRAAEAKRAKPEEKAHGVPLDSEFRSLFTPAGWAFAIWGVIYAGEMAMTAHALL-----GGDERVAAAAPYWAVACGLQSLWCVAFRPWAKKPRHFWVSSALLITEAFALGGATRALRGAGSISPSEAL-FWTTRVPLSLHFGWISCAALVNVNSHVAKTCAIDT--QIAFAFLSAFGASALGAGVSVFSGDAVYGAVVAWALAAVASDGG 274          
BLAST of mRNA_S-dermatodea_contig9571.17594.1 vs. uniprot
Match: A0A6V1K7Z9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1K7Z9_HETAK)

HSP 1 Score: 142 bits (358), Expect = 5.040e-37
Identity = 83/229 (36.24%), Postives = 120/229 (52.40%), Query Frame = 1
Query:    1 QILTALAWTVNMKATFAGGRLDGSS-RGVPSTPRPVS-FFTPASWAFTIWAPIFLGEALFVQFQILPLPSIRGSWWLSDVSPWFACAMLFQTLWCLSFRPWARDAGLLWLPALLLGGAAFALGGAHSVLREA--WFARDMDLPGYLLVNLPISLHFGWLSCASLVSANGFLGSVARLSNGVKLSFSLLSVCAAVALAASITLIREDPIFAAVVAWALWAVGSPDGWGSL 675
            Q+L    +  N  A    GR+D    R   S  + V+ FFTPA WAF IW PIF+GE +FV +Q LP+  I+   +L+ +SP++  A+ FQ++W    RPWA + G  W+ A LL     AL G H V+         D+++  +++  +P+SLHFGW+  A LVS NG L     L+   K  FS  SV  A  +   +   R DP+ A  ++WAL  +     W  L
Sbjct:   99 QVLNTFIFLFNRWAGKRPGRMDMKQPRAEASQKKEVARFFTPAGWAFRIWIPIFIGETIFVFYQALPINYIKNKDFLAMLSPFWIAAIGFQSIWTFCARPWAVENGYGWIQAALLVLTGVALSGVHKVMTSQPHTLVGDLNILDFIVAQIPLSLHFGWMMAAGLVSVNGVLART-PLTIRAKHLFSDASVVVATVIGVVVAAKRTDPVVAFALSWALAGLADDKAWEKL 326          
BLAST of mRNA_S-dermatodea_contig9571.17594.1 vs. uniprot
Match: A0A1Y5IB82_OSTTA (Uncharacterized protein n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IB82_OSTTA)

HSP 1 Score: 142 bits (358), Expect = 3.030e-35
Identity = 85/237 (35.86%), Postives = 124/237 (52.32%), Query Frame = 1
Query:    1 QILTALAWTVNMKATFAGGRLDGS----------------SRGVPSTPRPVSFFTPASWAFTIWAPIFLGEALFVQFQILPLPSIRGSWWLSDVSPWFACAMLFQTLWCLSFRPWARDAGLLWLPALLLGGAAFALGGAHSVLREAWFARDMDLPGYLLVNLPISLHFGWLSCASLVSANGFLGSVARLSNGVKLSFSLLSVCAAVALAASITLIREDPIFAAVVAWALWAVGSPDG 663
            +++ ALA+ VN+ +  A GR+DG                 + GVP      S FTPA WAF IW  I+ GE       +L      G   ++  +P++A A   Q+LWC++FRPWA+     W+ + LL   AFALGGA   LR A      +   +    +P+SLHFGW+SCA+LV+ N  +     +    +++F+ LS   A AL A +++   D ++ AVVAWAL AV S  G
Sbjct:  343 KVVVALAYGVNVASVSAPGRIDGEMQKRAAEAKRAKPEEKAHGVPLDSEFRSLFTPAGWAFAIWGVIYAGEMAMTAHALL-----GGDERVAAAAPYWAVACGLQSLWCVAFRPWAKKPRHFWVSSALLITEAFALGGATRALRGAGSISPSEAL-FWTTRVPLSLHFGWISCAALVNVNSHVAKTCAIDT--QIAFAFLSAFGASALGAGVSVFSGDAVYGAVVAWALAAVASDGG 571          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9571.17594.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCC2_ECTSI5.540e-10767.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FS55_ECTSI6.860e-7251.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z9R9_9STRA9.290e-7049.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UXB1_9STRA1.850e-6348.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9D883_9STRA2.400e-4643.84Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S0WI04_9CHLO1.040e-4036.05Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A7S2UVR2_9STRA5.370e-3835.14Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A090N4T8_OSTTA1.200e-3735.86Unnamed product n=1 Tax=Ostreococcus tauri TaxID=7... [more]
A0A6V1K7Z9_HETAK5.040e-3736.24Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1Y5IB82_OSTTA3.030e-3535.86Uncharacterized protein n=1 Tax=Ostreococcus tauri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9571contigS-dermatodea_contig9571:6224..8213 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score329.3
Seed ortholog evalue1.4e-87
Seed eggNOG ortholog2880.D8LCC2
EggNOG OGs2CRKW@1,2S47J@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-14_005300.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorymitochondrion
Exons4
Model size675
Cds size675
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9571.17594.1prot_S-dermatodea_contig9571.17594.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9571 6224..8213 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925417.5830567-CDS-S-dermatodea_contig9571:6223..64521622925417.5830567-CDS-S-dermatodea_contig9571:6223..6452Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9571 6224..6452 -
1694079919.8604112-CDS-S-dermatodea_contig9571:6223..64521694079919.8604112-CDS-S-dermatodea_contig9571:6223..6452Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9571 6224..6452 -
1622925417.5931294-CDS-S-dermatodea_contig9571:6714..68931622925417.5931294-CDS-S-dermatodea_contig9571:6714..6893Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9571 6715..6893 -
1694079919.8783484-CDS-S-dermatodea_contig9571:6714..68931694079919.8783484-CDS-S-dermatodea_contig9571:6714..6893Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9571 6715..6893 -
1622925417.606741-CDS-S-dermatodea_contig9571:7493..76001622925417.606741-CDS-S-dermatodea_contig9571:7493..7600Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9571 7494..7600 -
1694079919.8908443-CDS-S-dermatodea_contig9571:7493..76001694079919.8908443-CDS-S-dermatodea_contig9571:7493..7600Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9571 7494..7600 -
1622925417.6185484-CDS-S-dermatodea_contig9571:8053..82131622925417.6185484-CDS-S-dermatodea_contig9571:8053..8213Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9571 8054..8213 -
1694079919.9086497-CDS-S-dermatodea_contig9571:8053..82131694079919.9086497-CDS-S-dermatodea_contig9571:8053..8213Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9571 8054..8213 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9571.17594.1

>prot_S-dermatodea_contig9571.17594.1 ID=prot_S-dermatodea_contig9571.17594.1|Name=mRNA_S-dermatodea_contig9571.17594.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=225bp
QILTALAWTVNMKATFAGGRLDGSSRGVPSTPRPVSFFTPASWAFTIWAP
IFLGEALFVQFQILPLPSIRGSWWLSDVSPWFACAMLFQTLWCLSFRPWA
RDAGLLWLPALLLGGAAFALGGAHSVLREAWFARDMDLPGYLLVNLPISL
HFGWLSCASLVSANGFLGSVARLSNGVKLSFSLLSVCAAVALAASITLIR
EDPIFAAVVAWALWAVGSPDGWGSL
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mRNA from alignment at S-dermatodea_contig9571:6224..8213-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9571.17594.1 ID=mRNA_S-dermatodea_contig9571.17594.1|Name=mRNA_S-dermatodea_contig9571.17594.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1990bp|location=Sequence derived from alignment at S-dermatodea_contig9571:6224..8213- (Saccorhiza dermatodea SderLu1190fm monoicous)
CAGATCCTAACGGCTCTGGCGTGGACAGTGAATATGAAGGCGACATTCGC CGGCGGTCGCCTCGATGGCAGCAGCCGGGGCGTGCCCTCGACCCCTCGGC CCGTTAGCTTCTTCACACCCGCCAGCTGGGCCTTCACGATTTGGGCGCCC ATATTCTTGGGTAAGCAGCGCCGCGGAAGGGGGATCTGCGGTTTGGATGC TTTCGCTTCGAGCCGCGCGGGGAGGCGGGGAGGGTTGGTGGAATTTTCCT CTTTCGAGGCTAGGAGCTGCATCGGGGGGGGGGGTGGTGCGTTCGGTACA TGTGCCGCGGTGTGCGCGATCTTCGAATTCGGGGCACATCATTTTTTAAA GCGCGCACTCCTAGCAGTCGATTGCAACAACGAGGCACGTTACCTACGTG AGAACAACTTGGGAGCAAGATGTGAAATCTTGATGGTCGCGGAAAGCTCT TCGCCGCTGTACAACGTAGGAAATAGAGTTCTCCCGTAGTTTCTGAGATA CAATAAACCGTATGATGCTACACTAGCGCGGCTAAGAAACTTACCCACGT AAACGAAACGCCTCTTTTGTATCGGCCCTTCTCGTTGTCCCCCCACCCTC TTCCTCTCTCCAGGCGAGGCGCTGTTCGTGCAGTTCCAGATACTGCCCCT GCCTTCCATCCGCGGATCTTGGTGGCTATCCGACGTCAGCCCGTGGTTCG CTTGCGCCATGCTTTTTCAGGTGAGCGCTGTCGTCATCGCTTCGCAAGCA AAACGTATGGTAGAACTGCTCTTTAAACACACCGGCTCGCCACCGCACTG CAAGCGATTATGTCTGTCGGGGTTATTTTTTGCGGCTTGAACCGCGTGGA GCGATCCTTTGTCGCCCCTCTTGGAATCGCCAGAGTGATATTGCTGTGCT GCACGTGTCTTTCTTCGTGCCTTGCGCTCGGGCCGGGAGTCGTGCTCGGA GATGACGCTGTCGACACCCGGCGCGAATCGTTGCAAACACTGGTGGGTGC GGTTGCGTTATTGTGCCGCTCTCTCCCACGCGTTACCTGGCACACGTTTC CCCTACGGTGGAACGACACATGATGGCGTTATCCACGACGGTACCGGCAC GTCAAACACGGTAGATCATTCTTGACCACCCATTCAAATACCCATTGTTT CTTGACGCTCCCCCGCTTTTTTCCTTGTTTTTTCCCCATGCCCCCCCCCC CCCCCTTAACCCATCCCCTCCATGAAAGCGTACAAGCCACGATTCTTAAA ACGTAAATGTGGCCCCCCTTACCCCCCTTCGTTGCTGCTATCGTATGCTG CTCTCTCGCTCGCTCTCTAGACCCTCTGGTGTCTATCGTTCCGGCCGTGG GCGAGAGACGCCGGGCTACTCTGGCTTCCGGCGCTATTGCTGGGCGGCGC AGCGTTCGCTCTCGGCGGGGCTCACTCCGTCCTCCGAGAGGCGTGGTTCG CGAGAGACATGGATCTCCCCGGGTACCTTCTGGTGAACCTTCCCATCAGG TTCGTACTTACCGAAACGGAGGGTGCAAGCCGCGGCGTGTAGTGTTTCCG ATTAACCAATGCGCTTCTTCTCGGGCATACTCCAAGGTGGGCGCTGCCCG ACGTGTGTCTCACCTAGACCGAAATCACACGGGACCAAAATTTTCCAACC GAGACGCGGTTCGATACCTCGATGCGAGTCGCTCACACATATACACCTCA CGTGTCCTCTCACCTCAGAACCTCGGCACCCCCACCCCTCTTCACCCTCA CGCCGTCCCAGTCTCCACTTCGGCTGGCTTTCGTGCGCGTCCCTGGTGAG CGCTAACGGTTTCCTTGGGTCGGTGGCGAGGCTCTCCAACGGCGTCAAGC TATCCTTTTCCTTGCTCTCGGTGTGTGCTGCGGTGGCGCTCGCGGCGAGC ATCACACTCATCCGCGAAGACCCCATTTTTGCGGCTGTGGTGGCGTGGGC GCTCTGGGCGGTCGGGAGTCCGGACGGCTGGGGCAGCCTC
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Coding sequence (CDS) from alignment at S-dermatodea_contig9571:6224..8213-

>mRNA_S-dermatodea_contig9571.17594.1 ID=mRNA_S-dermatodea_contig9571.17594.1|Name=mRNA_S-dermatodea_contig9571.17594.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1350bp|location=Sequence derived from alignment at S-dermatodea_contig9571:6224..8213- (Saccorhiza dermatodea SderLu1190fm monoicous)
CAGATCCTAACGGCTCTGGCGTGGACAGTGAATATGAAGGCGACATTCGC
CGGCGGTCGCCTCGATGGCAGCAGCCGGGGCGTGCCCTCGACCCCTCGGC
CCGTTAGCTTCTTCACACCCGCCAGCTGGGCCTTCACGATTTGGGCGCCC
ATATTCTTGGCAGATCCTAACGGCTCTGGCGTGGACAGTGAATATGAAGG
CGACATTCGCCGGCGGTCGCCTCGATGGCAGCAGCCGGGGCGTGCCCTCG
ACCCCTCGGCCCGTTAGCTTCTTCACACCCGCCAGCTGGGCCTTCACGAT
TTGGGCGCCCATATTCTTGGGCGAGGCGCTGTTCGTGCAGTTCCAGATAC
TGCCCCTGCCTTCCATCCGCGGATCTTGGTGGCTATCCGACGTCAGCCCG
TGGTTCGCTTGCGCCATGCTTTTTCAGGCGAGGCGCTGTTCGTGCAGTTC
CAGATACTGCCCCTGCCTTCCATCCGCGGATCTTGGTGGCTATCCGACGT
CAGCCCGTGGTTCGCTTGCGCCATGCTTTTTCAGACCCTCTGGTGTCTAT
CGTTCCGGCCGTGGGCGAGAGACGCCGGGCTACTCTGGCTTCCGGCGCTA
TTGCTGGGCGGCGCAGCGTTCGCTCTCGGCGGGGCTCACTCCGTCCTCCG
AGAGGCGTGGTTCGCGAGAGACATGGATCTCCCCGGGTACCTTCTGGTGA
ACCTTCCCATCAGACCCTCTGGTGTCTATCGTTCCGGCCGTGGGCGAGAG
ACGCCGGGCTACTCTGGCTTCCGGCGCTATTGCTGGGCGGCGCAGCGTTC
GCTCTCGGCGGGGCTCACTCCGTCCTCCGAGAGGCGTGGTTCGCGAGAGA
CATGGATCTCCCCGGGTACCTTCTGGTGAACCTTCCCATCAGTCTCCACT
TCGGCTGGCTTTCGTGCGCGTCCCTGGTGAGCGCTAACGGTTTCCTTGGG
TCGGTGGCGAGGCTCTCCAACGGCGTCAAGCTATCCTTTTCCTTGCTCTC
GGTGTGTGCTGCGGTGGCGCTCGCGGCGAGCATCACACTCATCCGCGAAG
ACCCCATTTTTGCGGCTGTGGTGGCGTGGGCGCTCTGGGCGGTCGGGAGT
CCGGACGGCTGGGGCAGCCTCTCTCCACTTCGGCTGGCTTTCGTGCGCGT
CCCTGGTGAGCGCTAACGGTTTCCTTGGGTCGGTGGCGAGGCTCTCCAAC
GGCGTCAAGCTATCCTTTTCCTTGCTCTCGGTGTGTGCTGCGGTGGCGCT
CGCGGCGAGCATCACACTCATCCGCGAAGACCCCATTTTTGCGGCTGTGG
TGGCGTGGGCGCTCTGGGCGGTCGGGAGTCCGGACGGCTGGGGCAGCCTC
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