prot_S-dermatodea_contig9557.17579.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9557.17579.1
Unique Nameprot_S-dermatodea_contig9557.17579.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length218
Homology
BLAST of mRNA_S-dermatodea_contig9557.17579.1 vs. uniprot
Match: A0A6H5J9S6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9S6_9PHAE)

HSP 1 Score: 261 bits (668), Expect = 1.290e-84
Identity = 129/214 (60.28%), Postives = 162/214 (75.70%), Query Frame = 0
Query:    1 RRIVRWNEEGVFHNSPLVDADGSPTFLRYARTPAGRFLHILPAGLWSVMAPLQLSPYFRSNHRTAHRRMGRVFIGMSVSIAFGLVP----IAVTGAMNAEHNVSKGVIISLAAYFLVTALLAINHARNKRYAKHRVWILRHVAMGYSVHMQRLLMMLTHWVFPLLIPGYTAHTVEGAKLREVVFSSYFRGAMVICLASMEVWLRHTTPTGAILQ 210
            RRI    E+G + ++PL DA+G P+FL YARTPAGRF+HILPAGLWSV+APLQL+P FR+ HR AHRR+GR+FI MSVSI+ GLVP    +A T     +    +G ++  A YFLVT LLA++HARNKR+A HRVW+LRHVAMGYSVHMQRLL  LT W+FPLL+PGYT  T +G +LR  VF+ YF   +V+ +  MEVWLRHT P+G +L+
Sbjct:   69 RRIEAQGEQGFYRSTPLFDAEGKPSFLAYARTPAGRFMHILPAGLWSVIAPLQLNPSFRAKHRAAHRRLGRLFIFMSVSISLGLVPLVLGVAPTTTATGDSRGGRGALL-FAGYFLVTGLLAVHHARNKRFADHRVWMLRHVAMGYSVHMQRLLGHLTWWIFPLLMPGYTDLTNDGMELRARVFALYFVAGVVLTVGPMEVWLRHTLPSGKVLR 281          
BLAST of mRNA_S-dermatodea_contig9557.17579.1 vs. uniprot
Match: D7FX30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX30_ECTSI)

HSP 1 Score: 258 bits (659), Expect = 1.470e-82
Identity = 129/207 (62.32%), Postives = 158/207 (76.33%), Query Frame = 0
Query:    1 RRIVRWNEEGVF-HNSPLVDADGSPTFLRYARTPAGRFLHILPAGLWSVMAPLQLSPYFRSNHRTAHRRMGRVFIGMSVSIAFGLVPIAVTGAMNAEHNVSKGVIISLAAYFLVTALLAINHARNKRYAKHRVWILRHVAMGYSVHMQRLLMMLTHWVFPLLIPGYTAHTVEGAKLREVVFSSYFRGAMVICLASMEVWLRHTTPTG 206
            RRI    E+G F  +SPL+DA+G P+ L YARTPAGR +HILPAGLWSV+APLQLSP FR+ HRTAHRR+GR+FI MSVSI+ GLVP+ ++GA    +  +    +  A YFLVT LLA++HARNKR+A HRVW+LRHVAMGYSVHMQRLL  LT W+FPLL+PGYT  T  G +LR  VF SYF   + + +  MEVWLRHT+P+G
Sbjct:   69 RRIEALGEQGTFSRSSPLIDAEGKPSILAYARTPAGRVMHILPAGLWSVIAPLQLSPSFRAKHRTAHRRLGRLFIFMSVSISLGLVPLVLSGAPTTPNWSNGRESLVFAGYFLVTGLLAVHHARNKRFADHRVWMLRHVAMGYSVHMQRLLGHLTWWMFPLLMPGYTDFTNGGKELRANVFISYFFVGLALTVGPMEVWLRHTSPSG 275          
BLAST of mRNA_S-dermatodea_contig9557.17579.1 vs. uniprot
Match: D7FX31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX31_ECTSI)

HSP 1 Score: 253 bits (646), Expect = 1.060e-81
Identity = 124/213 (58.22%), Postives = 161/213 (75.59%), Query Frame = 0
Query:    2 RIVRWNEEGVFHNSPLVDADGSPTFLRYARTPAGRFLHILPAGLWSVMAPLQLSPYFRSNHRTAHRRMGRVFIGMSVSIAFGLVPIAVTGAMNAEHNVS-KGVIISLAAYFLVTALLAINHARNKRYAKHRVWILRHVAMGYSVHMQRLLMMLTHWVFPLLIPG-YTAHTVEGAKLREVVFSSYFRGAMVICLASMEVWLRHTTPTGAILQKE 212
            ++VR  E+G F ++PL DA+G P+FL YARTPAGRF+HILPAGLWSV+APLQL+P FR+ HRTAHRR+GR+FI MSVS+A G+VPI ++GA     +V+  G + +LAAYFL T +LA  HAR+KR+A HR+WILRHVAMGY+ H+QRLL  L+ W  PL+ P  YT  + EGA LR  VF  YF  ++V+C+  ME+WLRHTT     L++E
Sbjct:   40 QVVRQGEQGFFRSTPLYDAEGKPSFLAYARTPAGRFMHILPAGLWSVIAPLQLNPSFRAKHRTAHRRLGRLFIFMSVSMALGVVPIVLSGASLIRRSVAVDGGLFTLAAYFLATGVLAATHARSKRFADHRIWILRHVAMGYAAHVQRLLAALSWWAIPLVAPAKYTELSPEGALLRGDVFGGYFLVSIVLCVGLMEMWLRHTTTASGTLREE 252          
BLAST of mRNA_S-dermatodea_contig9557.17579.1 vs. uniprot
Match: A0A6H5JCE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCE1_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 1.310e-25
Identity = 57/107 (53.27%), Postives = 73/107 (68.22%), Query Frame = 0
Query:   38 LHILPAGLWSVMAPLQLSPYFRSNHRTAHRRMGRVFIGMSVSIAFGLVPIAVTGAMNAEHNVS----KGVIIS---------LAAYFLVTALLAINHARNKRYAKHR 131
            +HILPAGLWSV+AP QLSP FR+ HRTAHRR+GR+FI MSVSIA GLVP+ ++ A     + +      +I+           + YFLVT LLA++HARNK +A HR
Sbjct:    1 MHILPAGLWSVIAPQQLSPSFRAKHRTAHRRLGRLFILMSVSIALGLVPLVLSVAPTTPASKTTLGPSALIVDWSDGRESLVFSGYFLVTGLLAVHHARNKGFADHR 107          
BLAST of mRNA_S-dermatodea_contig9557.17579.1 vs. uniprot
Match: A0A836CPM6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPM6_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.210e-24
Identity = 73/212 (34.43%), Postives = 107/212 (50.47%), Query Frame = 0
Query:    2 RIVRWNEEGVFHNSPLVDADGSPTFLRYARTPAGRFLHILPAGLWSVMAPLQLSPYFRSNHRTAHRRMGRVFIGMSVSIAFGLVPIAVTGAM-NAEHNVSKGV-----IISLAAYFLVTALLAINHARNKRYAKHRVWILRHVAMGYSVHMQRLLMMLTHWVFPLLIPGYTAHTVEGAKLREVVFSSYFRGAMVICLASMEVWLRHTTPTGA 207
            R+VR  +EG F    L + DGSP  L+Y   P  R  H+LPA +W+V+AP+QLS   R      HR  GRVF+  S  IA GL  I +   + N     + G      + ++ A+F++T    +  AR      H VW+LRH A GY V +QR +++LT     L+  G+     + AK    V +     A  I + ++EVWL  T+ + A
Sbjct:   19 RLVRMYKEGRFLTKTLREDDGSPFGLKYKNFPVARLCHMLPAPIWAVLAPIQLSATIRQRFCRVHRVSGRVFMTCSTLIAIGLCSIGLCSIIKNRLTFYTAGFWDLVFLSAMNAWFVLTGACGVARARRSDIRGHHVWMLRHCACGYFVFLQRTMVLLTRGA--LMRGGFDLTVSKNAKAWFHVCALV---AAAISVTAIEVWLAVTSASAA 225          
BLAST of mRNA_S-dermatodea_contig9557.17579.1 vs. uniprot
Match: A0A7R9VKZ2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VKZ2_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.240e-16
Identity = 57/184 (30.98%), Postives = 87/184 (47.28%), Query Frame = 0
Query:   26 FLRYARTPAGRFLHILPAGLWSVMAPLQLSPYFRSNHRTAHRRMGRVFIGMSVSIAFGLVPI---------AVTGAMNAEHNVSKGVIISLAAYFLVTALLAINHARNKRYAKHRVWILRHVAMGYSVHMQRLLMMLTHWVFPLLIPGYTAHTVEGAKLREVVFSSYFRGAMV-ICLASMEVWL 199
            F +Y +  A +F H+LP  +WS++ PLQL    R      HR  G +F+  S+SI+ GL+ I              +      S+  I  L  YF  T +LA   A+ +++  HR W++RHVA G  V +QRLL++    ++PL  P      V     R +   S   GA+  IC     ++L
Sbjct:   23 FTKYTKHQAVQFTHMLPGAIWSLLVPLQLHSGVRKRVPKLHRICGYLFLACSLSISMGLILIMKRRLDFEAGFEEELPPPRYTSQPAIFGLGTYFATTGILASYFAKTRQFVSHRRWVIRHVAAGLFVAVQRLLLL---GIYPLFYPP----PVSRVHQRWIFGQSAHVGAIFSICAGEAAIYL 199          
BLAST of mRNA_S-dermatodea_contig9557.17579.1 vs. uniprot
Match: A0A8J4BGR0_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BGR0_9CHLO)

HSP 1 Score: 81.3 bits (199), Expect = 8.010e-15
Identity = 57/189 (30.16%), Postives = 87/189 (46.03%), Query Frame = 0
Query:   27 LRYARTPAGRFLHILPAGLWSVMAPLQLSPYFRSNHRTAHRRMGRVFIGMSVSIAFGLVPIAVTG---AMNAEHNVSKGVIIS----------LAAYFLVTALLAINHARNKRYAKHRVWILRHVAMGYSVHMQRLLMMLTHWVFPLLIPGYTA--HTVEGAKLREVVFSSYFRGAMVICLASMEVWLR 200
            ++YA+ PA +  H+LP+G+WS+   +QL P  RS+    HR  G+V    S+ I  G   +  +G    +        G  I           L+A+FL+TA +A+ HAR   Y  HR W +RH+A G  V +QR        VF + +  + A  H       R  +F      A  +CL   E+ L+
Sbjct:   68 IKYAQHPAVKLTHLLPSGVWSICGAIQLIPQIRSSVPRLHRISGQVMFLCSILIVIGYALMEASGLVTTLQPSGTTPPGPTIQMHLPHFTFRLLSAWFLLTAGVALAHARRGEYKAHRRWAVRHIASGAWVIVQR--------VFVMWLAAWAAMWHVTFSEVQRHQLFYGMSALAAAVCLIGAELHLQ 248          
BLAST of mRNA_S-dermatodea_contig9557.17579.1 vs. uniprot
Match: A0A6H5JEP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEP7_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 5.580e-13
Identity = 36/53 (67.92%), Postives = 41/53 (77.36%), Query Frame = 0
Query:  134 ILRHVAMGYSVHMQRLLMMLTHWVFPLLIPGYTAHTVEGAKLREVVFSSYFRG 186
            +LRHVAMGYSVHMQRLL  LT W+FPLL+PGYT  T +G +LR  VF S F G
Sbjct:    1 MLRHVAMGYSVHMQRLLGHLTWWIFPLLMPGYTDLTKDGKELRANVFISCFLG 53          
BLAST of mRNA_S-dermatodea_contig9557.17579.1 vs. uniprot
Match: R1DGR7_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DGR7_EMIHU)

HSP 1 Score: 74.3 bits (181), Expect = 1.510e-12
Identity = 49/149 (32.89%), Postives = 72/149 (48.32%), Query Frame = 0
Query:   28 RYARTPAGRFLHILPAGLWSVMAPLQLSPYFRSNHRTAHRRMGRVFIGMSVSIAFGLVPIAVTGAM---------NAEHNVSK--------GVIISLAAYFLVTALLAINHARNKRYAKHRVWILRHVAMGYSVHMQRLLMMLTHWVFP 159
            +Y      +  H LP  LW+ + P QL P  R   R AHR  G VF G +  +  G   I   G +         + +HN ++         V   +A +F+VT  LA+ HA ++R  +HR W+LRHVA G  V +QRL+++L     P
Sbjct:   47 KYKGHSVAQLCHTLPGALWAALIPFQLHPVARRRFRRAHRLGGYVFTGSAYLMMVGFAYIDAKGLVYLHSDFPQIHPDHNTTRFPVHVPHEPVFRMVAWWFVVTISLAVWHAVHRRVKEHRRWMLRHVASGIWVAVQRLVVILVSSATP 195          
BLAST of mRNA_S-dermatodea_contig9557.17579.1 vs. uniprot
Match: A0A7S2K0V7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K0V7_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 5.060e-11
Identity = 50/174 (28.74%), Postives = 81/174 (46.55%), Query Frame = 0
Query:    5 RWNEEGVFHNSPLVDADGSP---TFLRYARTPAGRFLHILPAGLWSVMAPLQLSPYFRSNHRTAHRRMGRVFIGMSVSIAFGLVPIA----------VTGAMNAEH------------NVSKGVIISLAAYFLVTALLAINHARNKRYAKHRVWILRHVAMGYSVHMQRLLMML 153
            +W++E  +      +  G     T L+YA   A +  HILP+ +WS   P QL P  R  ++  HR  G  F   S+ +  G+V I                N EH             + +  I +L A+F  TA+ A+   R K +A+H+ +++RHVA G  V +QR+L+++
Sbjct:   15 KWHDEMKYFIERRGNTGGGVPVNTNLKYAGHAAVKLTHILPSTIWSASIPFQLHPKVRRTYKALHRLTGYAFFCTSLLLIIGIVLIDRRKLYWHLADYPSIPNYEHISRFQFIQQSAQYLPEYSIYALTAWFTFTAIAALAFVRRKNFAQHQNYVIRHVASGIWVAVQRVLLII 188          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9557.17579.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J9S6_9PHAE1.290e-8460.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX30_ECTSI1.470e-8262.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FX31_ECTSI1.060e-8158.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCE1_9PHAE1.310e-2553.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CPM6_9STRA1.210e-2434.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9VKZ2_9STRA1.240e-1630.98Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A8J4BGR0_9CHLO8.010e-1530.16Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
A0A6H5JEP7_9PHAE5.580e-1367.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
R1DGR7_EMIHU1.510e-1232.89Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A7S2K0V7_9STRA5.060e-1128.74Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018750Protein of unknown function DUF2306, membranePFAMPF10067DUF2306coord: 37..156
e-value: 8.3E-13
score: 48.8
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 59..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..58
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 200..217
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 94..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 178..199
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 120..138
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 139..158
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..36
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..93
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..119
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 159..177
NoneNo IPR availableTMHMMTMhelixcoord: 71..93
NoneNo IPR availableTMHMMTMhelixcoord: 103..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9557contigS-dermatodea_contig9557:4402..8416 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9557.17579.1mRNA_S-dermatodea_contig9557.17579.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9557 4402..8416 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9557.17579.1 ID=prot_S-dermatodea_contig9557.17579.1|Name=mRNA_S-dermatodea_contig9557.17579.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=218bp
RRIVRWNEEGVFHNSPLVDADGSPTFLRYARTPAGRFLHILPAGLWSVMA
PLQLSPYFRSNHRTAHRRMGRVFIGMSVSIAFGLVPIAVTGAMNAEHNVS
KGVIISLAAYFLVTALLAINHARNKRYAKHRVWILRHVAMGYSVHMQRLL
MMLTHWVFPLLIPGYTAHTVEGAKLREVVFSSYFRGAMVICLASMEVWLR
HTTPTGAILQKEEKKKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018750DUF2306_membrane