mRNA_S-dermatodea_contig9531.17555.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9531.17555.1 vs. uniprot
Match: A0A7R9YVQ9_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9YVQ9_9CHLO) HSP 1 Score: 172 bits (436), Expect = 2.690e-51 Identity = 78/141 (55.32%), Postives = 89/141 (63.12%), Query Frame = 1
Query: 1 AINTGIYVTWRSLNTGLDCARVGRVSRCFCGCSYEMHDFRKGHA-LPVCRGCECPGFDFVPSRPEEIGEWWLPRRPGFYASTWRAKCRCGHTHEDHHPARRTCGSCKCGEFSSAYGCVVCDSHQEDHQTKVENARERVEAG 420
AI G Y TWRS G DC RVG +RCFCG ++E H F A P C C C GF FVP RPEE+GEWWLPRR GF TWRAKCRCGH H+ H P + C SC C F S + C+VCD E+H+T E RER+ AG
Sbjct: 38 AIENGTYATWRS-QKGEDCTRVGPGARCFCGHAFEEHQFLSSRAPAPRCCSCACGGFSFVPQRPEEVGEWWLPRRKGFNVHTWRAKCRCGHAHDVHEPLYKRCLSCGCSTFQSNFACLVCDGKWEEHETVFETTRERIAAG 177
BLAST of mRNA_S-dermatodea_contig9531.17555.1 vs. uniprot
Match: A0A7S3QLF0_DUNTE (Hypothetical protein (Fragment) n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QLF0_DUNTE) HSP 1 Score: 168 bits (426), Expect = 1.570e-50 Identity = 75/141 (53.19%), Postives = 94/141 (66.67%), Query Frame = 1
Query: 1 AINTGIYVTWRSLNTGLDCARVGRVSRCFCGCSYEMHDF-RKGHALPVCRGCECPGFDFVPSRPEEIGEWWLPRRPGFYASTWRAKCRCGHTHEDHHPARRTCGSCKCGEFSSAYGCVVCDSHQEDHQTKVENARERVEAG 420
AI+TG+YVT+RS + +DC RVG S+CFCG Y H F K P C CEC GF F+P RPEE+G+WWL RR GF TWRAKC+CGH+HE+HHP R+ C C C +F S + C+ CD EDH+T E +R+ AG
Sbjct: 37 AISTGMYVTFRS-SPRMDCTRVGPHSKCFCGHLYSEHSFISKKSVYPRCHNCECTGFQFIPRRPEEVGDWWLVRRKGFNVHTWRAKCKCGHSHEEHHPTRKRC-QCGCPQFQSNFACLACDKKWEDHETFFETTADRMAAG 175
BLAST of mRNA_S-dermatodea_contig9531.17555.1 vs. uniprot
Match: A0A0G4EG44_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EG44_VITBC) HSP 1 Score: 168 bits (425), Expect = 3.090e-49 Identity = 78/142 (54.93%), Postives = 92/142 (64.79%), Query Frame = 1
Query: 1 AINTGIYVTWRSLNTGLDCARVGRVSRCFCGCSYEMHDFRKGHAL-PVCRGCECPGFDFVPSRPEEIGEWWLPRRPGFYASTWRAKCRCGHTHEDHHPARR-TCGSCKCGEFSSAYGCVVCDSHQEDHQTKVENARERVEAG 420
AI TG Y WRS TG DC R+ S+CFCG H+F+ AL P C CEC + FVP+RPEE+GEWWLPRRPGF TWRAKC+C HTHE+H P R C C C F+SA+ C+ CD H EDH+T E+ ER AG
Sbjct: 43 AIETGQYAVWRSC-TGNDCFRIAPHSKCFCGHPLSSHEFKNSRALWPHCTMCECKAYAFVPTRPEEVGEWWLPRRPGFDVRTWRAKCKCKHTHEEHMPNRPYRCRKCPCSTFTSAFLCIACDKHWEDHETVFESEAERRAAG 183
BLAST of mRNA_S-dermatodea_contig9531.17555.1 vs. uniprot
Match: A0A150FWK8_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150FWK8_GONPE) HSP 1 Score: 166 bits (421), Expect = 4.070e-49 Identity = 77/141 (54.61%), Postives = 91/141 (64.54%), Query Frame = 1
Query: 1 AINTGIYVTWRSLNTGLDCARVGRVSRCFCGCSYEMHDFRKGHA-LPVCRGCECPGFDFVPSRPEEIGEWWLPRRPGFYASTWRAKCRCGHTHEDHHPARRTCGSCKCGEFSSAYGCVVCDSHQEDHQTKVENARERVEAG 420
A+ TGIY WRS + G DC R+ SRCFC SY H F + PVC+GC C F F+PSRPEE+GEWWLPRR GF TWRAKCRCGH H++H P R C C C F S + C+ CD EDH+T E A+ER+ AG
Sbjct: 37 AMETGIYGVWRS-SKGTDCTRIAPTSRCFCNHSYAEHFFVSPKSPYPVCKGCSCRAFAFIPSRPEEVGEWWLPRRKGFNVHTWRAKCRCGHGHDEHDPTHRRC-RCGCPAFISNFACLACDLKWEDHETVFETAQERLIAG 175
BLAST of mRNA_S-dermatodea_contig9531.17555.1 vs. uniprot
Match: A0A835SDR5_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835SDR5_9CHLO) HSP 1 Score: 164 bits (414), Expect = 9.790e-49 Identity = 76/141 (53.90%), Postives = 91/141 (64.54%), Query Frame = 1
Query: 1 AINTGIYVTWRSLNTGLDCARVGRVSRCFCGCSYEMHDFRKGHA-LPVCRGCECPGFDFVPSRPEEIGEWWLPRRPGFYASTWRAKCRCGHTHEDHHPARRTCGSCKCGEFSSAYGCVVCDSHQEDHQTKVENARERVEAG 420
A+ TGIY WRS G DC R+G +RCFC + H F + P+C+ C C GF F+PSRPEEIGEWWLPRR GF TWRAKCRCGH H++H P R C C C F+S + C+ CD EDH+T E ARER+ AG
Sbjct: 12 AMQTGIYGVWRSAKGG-DCTRIGPKARCFCDHPFADHFFVSPKSPYPICKSCNCRGFAFIPSRPEEIGEWWLPRRKGFNVHTWRAKCRCGHGHDEHDPHTRRC-RCGCPAFTSNFACLACDLKWEDHETVFETARERLVAG 150
BLAST of mRNA_S-dermatodea_contig9531.17555.1 vs. uniprot
Match: A0A7S3VH60_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VH60_DUNTE) HSP 1 Score: 168 bits (426), Expect = 7.490e-48 Identity = 75/141 (53.19%), Postives = 94/141 (66.67%), Query Frame = 1
Query: 1 AINTGIYVTWRSLNTGLDCARVGRVSRCFCGCSYEMHDF-RKGHALPVCRGCECPGFDFVPSRPEEIGEWWLPRRPGFYASTWRAKCRCGHTHEDHHPARRTCGSCKCGEFSSAYGCVVCDSHQEDHQTKVENARERVEAG 420
AI+TG+YVT+RS + +DC RVG S+CFCG Y H F K P C CEC GF F+P RPEE+G+WWL RR GF TWRAKC+CGH+HE+HHP R+ C C C +F S + C+ CD EDH+T E +R+ AG
Sbjct: 37 AISTGMYVTFRS-SPRMDCTRVGPHSKCFCGHLYSEHSFISKKSVYPRCHNCECTGFQFIPRRPEEVGDWWLVRRKGFNVHTWRAKCKCGHSHEEHHPTRKRC-QCGCPQFQSNFACLACDKKWEDHETFFETTADRMAAG 175
BLAST of mRNA_S-dermatodea_contig9531.17555.1 vs. uniprot
Match: A0A835W432_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835W432_CHLIN) HSP 1 Score: 165 bits (418), Expect = 4.860e-46 Identity = 75/141 (53.19%), Postives = 91/141 (64.54%), Query Frame = 1
Query: 1 AINTGIYVTWRSLNTGLDCARVGRVSRCFCGCSYEMHDFRKGHA-LPVCRGCECPGFDFVPSRPEEIGEWWLPRRPGFYASTWRAKCRCGHTHEDHHPARRTCGSCKCGEFSSAYGCVVCDSHQEDHQTKVENARERVEAG 420
A+ TGIY WRS G DC R+G +RCFC + H F + P+C+GC C GF F+PSRPEE+GEWWLPRR GF TWRAKCRCGH H++H P R C C C F+S + C+ CD EDH+T E RER+ AG
Sbjct: 12 AMQTGIYGVWRSAK-GTDCTRIGPTARCFCNHPFSDHFFVSPKSPYPICKGCTCRGFAFIPSRPEEVGEWWLPRRKGFNVHTWRAKCRCGHGHDEHDPHTRRC-RCGCPVFTSNFACLACDLKWEDHETVFETLRERLAAG 150
BLAST of mRNA_S-dermatodea_contig9531.17555.1 vs. uniprot
Match: A0A7S0V496_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0V496_9CHLO) HSP 1 Score: 158 bits (400), Expect = 5.880e-46 Identity = 71/140 (50.71%), Postives = 89/140 (63.57%), Query Frame = 1
Query: 1 AINTGIYVTWRSLNTGLDCARVGRVSRCFCGCSYEMHDFR-KGHALPVCRGCECPGFDFVPSRPEEIGEWWLPRRPGFYASTWRAKCRCGHTHEDHHPARRTCGSCKCGEFSSAYGCVVCDSHQEDHQTKVENARERVEA 417
AI TGIY ++R+ + DC R+G SRCFC ++ H+F K P C C C F F+P RPEE+GEWWLPRR GF TWRAKCRCGH H+DH P R C C CG+F+S + C+ CD + E H+T E+ ER A
Sbjct: 37 AIETGIYGSFRN-DKKEDCTRIGPSSRCFCYHNFSQHNFASKKSVFPHCTLCRCKAFSFIPQRPEEVGEWWLPRRKGFDVRTWRAKCRCGHGHDDHDPVARHCSVCGCGQFNSVFACLSCDMNWEHHETVFESEMERAAA 175
BLAST of mRNA_S-dermatodea_contig9531.17555.1 vs. uniprot
Match: A0A7S0WIW7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WIW7_9CHLO) HSP 1 Score: 156 bits (395), Expect = 8.630e-46 Identity = 73/141 (51.77%), Postives = 88/141 (62.41%), Query Frame = 1
Query: 1 AINTGIYVTWRSLNTGLDCARVGRVSRCFCGCSYEMHDFRKGHAL-PVCRGCECPGFDFVPSRPEEIGEWWLPRRPGFYASTWRAKCRCGHTHEDHHPARRTCGSCKCGEFSSAYGCVVCDSHQEDHQTKVENARERVEAG 420
AI TG+YV +R+ N G DC RVG S+CFCG Y H F ++ P C C C F FVP RPEE+G+WWL RR GF TWRAKCRCGH HE+H P + C C C F S + C+ CD EDH+T E +ER+ AG
Sbjct: 38 AIETGLYVVYRN-NNGQDCTRVGPSSKCFCGHYYRDHAFATRKSVYPHCASCACRAFAFVPQRPEEVGDWWLVRRKGFNVHTWRAKCRCGHPHEEHDPNTKRC-RCGCAVFVSNFACLACDKKWEDHETVFETTQERLAAG 176
BLAST of mRNA_S-dermatodea_contig9531.17555.1 vs. uniprot
Match: A0A7S2NZ14_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2NZ14_9DINO) HSP 1 Score: 156 bits (394), Expect = 1.220e-45 Identity = 72/143 (50.35%), Postives = 87/143 (60.84%), Query Frame = 1
Query: 1 AINTGIYVTWRSLNTGLD-CARVGRVSRCFCGCSYEMHDFRKGHAL--PVCRGCECPGFDFVPSRPEEIGEWWLPRRPGFYASTWRAKCRCGHTHEDHHPARRTCGSCKCGEFSSAYGCVVCDSHQEDHQTKVENARERVEAG 420
A+ TG+Y WR+ +G D C+R+G SRCFCG Y H + KG P C C+C GF ++P RPEE+GEWWLPRR GF WRAKCRCGH H+DH P R C C C +SSA+ C C EDH+ E ER AG
Sbjct: 9 ALATGLYGVWRNSTSGHDFCSRIGPTSRCFCGHDYSEHVWDKGRRRLRPACGCCDCDGFRYMPRRPEEVGEWWLPRRRGFDVRVWRAKCRCGHGHDDHDPNRLACRLCGCTAYSSAWLCTCCGGRWEDHEALWETEGERRAAG 151 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9531.17555.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9531.17555.1 >prot_S-dermatodea_contig9531.17555.1 ID=prot_S-dermatodea_contig9531.17555.1|Name=mRNA_S-dermatodea_contig9531.17555.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=140bp AINTGIYVTWRSLNTGLDCARVGRVSRCFCGCSYEMHDFRKGHALPVCRGback to top mRNA from alignment at S-dermatodea_contig9531:5122..7470- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9531.17555.1 ID=mRNA_S-dermatodea_contig9531.17555.1|Name=mRNA_S-dermatodea_contig9531.17555.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2349bp|location=Sequence derived from alignment at S-dermatodea_contig9531:5122..7470- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9531:5122..7470- >mRNA_S-dermatodea_contig9531.17555.1 ID=mRNA_S-dermatodea_contig9531.17555.1|Name=mRNA_S-dermatodea_contig9531.17555.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=840bp|location=Sequence derived from alignment at S-dermatodea_contig9531:5122..7470- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |