prot_S-dermatodea_contig95255.17548.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig95255.17548.1
Unique Nameprot_S-dermatodea_contig95255.17548.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length40
Homology
BLAST of mRNA_S-dermatodea_contig95255.17548.1 vs. uniprot
Match: D7G5L0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5L0_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 3.560e-17
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 0
Query:    1 QVACGFAYTAAVTASGDLYTWGAGENGRLGLGDVEDRHTP 40
            QVACGFAYTAAVTASG+LYTWGAGENGRLGLGDV DRHTP
Sbjct:  327 QVACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTP 366          
BLAST of mRNA_S-dermatodea_contig95255.17548.1 vs. uniprot
Match: A0A6H5JJV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV9_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 4.840e-17
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 0
Query:    1 QVACGFAYTAAVTASGDLYTWGAGENGRLGLGDVEDRHTP 40
            QVACGFAYTAAVTASG+LYTWGAGENGRLGLGDV DRHTP
Sbjct:  714 QVACGFAYTAAVTASGELYTWGAGENGRLGLGDVVDRHTP 753          
BLAST of mRNA_S-dermatodea_contig95255.17548.1 vs. uniprot
Match: A0A7S2FHZ6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHZ6_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 3.820e-15
Identity = 35/40 (87.50%), Postives = 35/40 (87.50%), Query Frame = 0
Query:    1 QVACGFAYTAAVTASGDLYTWGAGENGRLGLGDVEDRHTP 40
            QVACGFAYTA VT  G LYTWGAGENGRLGLGDVEDRH P
Sbjct:  409 QVACGFAYTAVVTTEGALYTWGAGENGRLGLGDVEDRHVP 448          
BLAST of mRNA_S-dermatodea_contig95255.17548.1 vs. uniprot
Match: A0A7S3ZR83_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZR83_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 1.820e-14
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 0
Query:    1 QVACGFAYTAAVTASGDLYTWGAGENGRLGLGDVEDRHTP 40
            QVACGFAYTAAV+  G LYTWGAGENGRLGLGDV+DRH P
Sbjct:  311 QVACGFAYTAAVSRDGALYTWGAGENGRLGLGDVDDRHEP 350          
BLAST of mRNA_S-dermatodea_contig95255.17548.1 vs. uniprot
Match: A0A7S4E565_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E565_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 1.820e-14
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 0
Query:    1 QVACGFAYTAAVTASGDLYTWGAGENGRLGLGDVEDRHTP 40
            QVACGFAYTAAV+  G LYTWGAGENGRLGLGDV+DRH P
Sbjct:  311 QVACGFAYTAAVSRDGALYTWGAGENGRLGLGDVDDRHEP 350          
BLAST of mRNA_S-dermatodea_contig95255.17548.1 vs. uniprot
Match: A0A7S3Y9A0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y9A0_HETAK)

HSP 1 Score: 70.5 bits (171), Expect = 4.680e-14
Identity = 33/40 (82.50%), Postives = 36/40 (90.00%), Query Frame = 0
Query:    1 QVACGFAYTAAVTASGDLYTWGAGENGRLGLGDVEDRHTP 40
            QVACGFAYT AV+A+G LYTWGAGENGRLGLGD EDR +P
Sbjct:   68 QVACGFAYTCAVSAAGALYTWGAGENGRLGLGDPEDRLSP 107          
BLAST of mRNA_S-dermatodea_contig95255.17548.1 vs. uniprot
Match: A0A7S1XMC2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMC2_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.620e-13
Identity = 32/40 (80.00%), Postives = 36/40 (90.00%), Query Frame = 0
Query:    1 QVACGFAYTAAVTASGDLYTWGAGENGRLGLGDVEDRHTP 40
            QVACGFAYTAA+TA G LYTWGAGENGRLG+GD +DR+ P
Sbjct:  146 QVACGFAYTAAITAGGALYTWGAGENGRLGVGDDQDRYAP 185          
BLAST of mRNA_S-dermatodea_contig95255.17548.1 vs. uniprot
Match: A0A7S2HV15_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HV15_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.050e-12
Identity = 33/40 (82.50%), Postives = 33/40 (82.50%), Query Frame = 0
Query:    1 QVACGFAYTAAVTASGDLYTWGAGENGRLGLGDVEDRHTP 40
            QVACGFAYTA VT  G LYTWGAGENGRLGLGD EDR  P
Sbjct:  338 QVACGFAYTAVVTTEGALYTWGAGENGRLGLGDSEDRCIP 377          
BLAST of mRNA_S-dermatodea_contig95255.17548.1 vs. uniprot
Match: K8YRX9_NANGC (Putative e3 ubiquitin-protein ligase herc3 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YRX9_NANGC)

HSP 1 Score: 66.6 bits (161), Expect = 7.240e-12
Identity = 31/40 (77.50%), Postives = 33/40 (82.50%), Query Frame = 0
Query:    1 QVACGFAYTAAVTASGDLYTWGAGENGRLGLGDVEDRHTP 40
            QVACGFAYTAAVT  G +YTWGAGENGRLGLGD  D+  P
Sbjct:   31 QVACGFAYTAAVTTEGQVYTWGAGENGRLGLGDELDKMRP 70          
BLAST of mRNA_S-dermatodea_contig95255.17548.1 vs. uniprot
Match: A0A4D9CRE3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRE3_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 9.350e-12
Identity = 31/40 (77.50%), Postives = 33/40 (82.50%), Query Frame = 0
Query:    1 QVACGFAYTAAVTASGDLYTWGAGENGRLGLGDVEDRHTP 40
            QVACGFAYTAAVT  G +YTWGAGENGRLGLGD  D+  P
Sbjct:  488 QVACGFAYTAAVTTEGQVYTWGAGENGRLGLGDELDKMRP 527          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig95255.17548.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5L0_ECTSI3.560e-1795.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJV9_9PHAE4.840e-1795.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2FHZ6_9STRA3.820e-1587.50Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3ZR83_9STRA1.820e-1485.00Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S4E565_9STRA1.820e-1485.00Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3Y9A0_HETAK4.680e-1482.50Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S1XMC2_9STRA1.620e-1380.00Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2HV15_9STRA1.050e-1282.50Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
K8YRX9_NANGC7.240e-1277.50Putative e3 ubiquitin-protein ligase herc3 (Fragme... [more]
A0A4D9CRE3_9STRA9.350e-1277.50Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 1..40
e-value: 1.2E-14
score: 55.9
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 2..39
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 15..40
e-value: 7.7E-8
score: 32.8
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 16..40
score: 11.569
NoneNo IPR availablePANTHERPTHR22870:SF330E3 UBIQUITIN-PROTEIN LIGASE HERC2coord: 1..40
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 1..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig95255contigS-dermatodea_contig95255:287..406 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig95255.17548.1mRNA_S-dermatodea_contig95255.17548.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig95255 287..406 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig95255.17548.1 ID=prot_S-dermatodea_contig95255.17548.1|Name=mRNA_S-dermatodea_contig95255.17548.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=40bp
QVACGFAYTAAVTASGDLYTWGAGENGRLGLGDVEDRHTP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009091RCC1/BLIP-II
IPR000408Reg_chr_condens