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Homology
BLAST of mRNA_S-dermatodea_contig9523.17545.1 vs. uniprot
Match: D8LKY8_ECTSI (Pleckstrin homology (PH) domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKY8_ECTSI) HSP 1 Score: 199 bits (506), Expect = 3.210e-51 Identity = 211/598 (35.28%), Postives = 254/598 (42.47%), Query Frame = 1
Query: 31 WSMGSTHGPLVASAPRSVWVPGKDGQ---KSLRLVDFSLPMWAGDRTSCGCLSHTELKWGKEGLAVSGGASMAGALAAALGNEAAWSPFLTSRGSFRWGLLAYALDSAFRDGGLDEKKNASL---RVSCMVTMKPSERMGLRLRDLHPGCGGGVVVVGFESKAAGKRAGIKQGDRIVRVEDVAVGRTSD----IIWAMSQAPAESS-DGAGRSVLLTL-LRGFPKSDR---------------------------PWLPPLDPSPAPTILSPPSSAVESRSDEDFSPLAVLSAPGSKTFSGNFSSVHRP------GFGGESSGAKDNGVRGSLPDATGLGEGSPMLGGMGLLGAAPPSPAAKVSLSXXXXXXEDKAELEVPLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPAPPQANVNAGGDPAKPFSAHN----RKLSHQGRLLPG-------SLGAGVGIALEACWACHPDDRSPMSDDENSRPMVY---KPEEVSAAVADTDRPTSESIEKLRGAVVGTCIGVAAADEGGGEEEEFQDTR-----SNDSGSSDASSLFLTAVSPSRIPPPLVSIASSMPAPPVSMTSS 1632
WS+ S H P+ ASAPRSVWVPGK+G SLRLV+F LP WAG RTSCGCLSHTEL WGK+ LA G G +A + + WSP S G+ A + GG + ++ + +V+ +++M+PSE MGLRLRD+HP CGGGVVV+GFE AAGKRAG+ QGDRI V + D + + AP + G G S TL GF P +P D T ++P SP AVLSAPG KTFSG + R GFG SGA D XXXXXX L V PAP QANVNAGGDPA PF+ S +G+ SL GVG AL ACW + +DENSRP + EEV R + + T +E F D S+ SGSS SSL LTAVSPSR+PPPLVS+AS PPVS SS
Sbjct: 460 WSVAS-HSPMAASAPRSVWVPGKNGSHKTSSLRLVEFCLPPWAGVRTSCGCLSHTELTWGKDSLAAGGQDQGLGGVAGGM-SGVGWSP--NGGDSRNVGVGAAPYSDLRQSGGTPQPRSGTTSPRKVALVISMRPSEPMGLRLRDVHPECGGGVVVIGFERSAAGKRAGVLQGDRITEVNESPASGEDDEDASVPSPVLSAPGRKTFSGRGTSGNNTLGFAGFYSGXXXXXXXXXXXXXXXXXXXXXXXXXXXTTPRVP--DNITVNTPVAP-------------SPEAVLSAPGRKTFSGGGGAARRSSKSGSLGFG--FSGADDXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXHALTLAVDNPPSPDETKGDEDSGEWGDSNGSADSTGGGRPLKVPAPTQANVNAGGDPAVPFATFRGGGRATPSREGQXXXXXXXXXMPSLRLGVGSALAACWGVQETN----DNDENSRPTEFDLGNSEEVEVEERIVVRKPPPVLVAMSRGTSATXXXXXXXXXXXXXDEVFGDDARSAAGSSGSGSSRDSSLLLTAVSPSRVPPPLVSVASWGTLPPVSRASS 1027
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 201.8 |
| Seed ortholog evalue | 7.9e-49 |
| Seed eggNOG ortholog | 2880.D8LKY8 |
| EggNOG free text desc. | Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) |
| EggNOG OGs | COG5422@1,KOG4424@2759 |
| COG Functional cat. | T |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 1632 |
| Cds size | 1620 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9523.17545.1 >prot_S-dermatodea_contig9523.17545.1 ID=prot_S-dermatodea_contig9523.17545.1|Name=mRNA_S-dermatodea_contig9523.17545.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=540bp
MSRLSRWSMGSTHGPLVASAPRSVWVPGKDGQKSLRLVDFSLPMWAGDRT SCGCLSHTELKWGKEGLAVSGGASMAGALAAALGNEAAWSPFLTSRGSFR WGLLAYALDSAFRDGGLDEKKNASLRVSCMVTMKPSERMGLRLRDLHPGC GGGVVVVGFESKAAGKRAGIKQGDRIVRVEDVAVGRTSDIIWAMSQAPAE SSDGAGRSVLLTLLRGFPKSDRPWLPPLDPSPAPTILSPPSSAVESRSDE DFSPLAVLSAPGSKTFSGNFSSVHRPGFGGESSGAKDNGVRGSLPDATGL GEGSPMLGGMGLLGAAPPSPAAKVSLSVAPPSPEDKAELEVPLDVPLDVP VDLSGDLSGSGHGTGDSADSSAGRAKGPAPPQANVNAGGDPAKPFSAHNR KLSHQGRLLPGSLGAGVGIALEACWACHPDDRSPMSDDENSRPMVYKPEE VSAAVADTDRPTSESIEKLRGAVVGTCIGVAAADEGGGEEEEFQDTRSND SGSSDASSLFLTAVSPSRIPPPLVSIASSMPAPPVSMTSS back to topmRNA from alignment at S-dermatodea_contig9523:4741..8421- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig9523.17545.1 ID=mRNA_S-dermatodea_contig9523.17545.1|Name=mRNA_S-dermatodea_contig9523.17545.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3681bp|location=Sequence derived from alignment at S-dermatodea_contig9523:4741..8421- (Saccorhiza dermatodea SderLu1190fm monoicous) CCCATCTCCAGCATGAGCCGCCTGTCGAGGTGGTCGATGGGTTCCACACA
CGGGCCCCTCGTAGCGTCAGCACCGCGATCCGTTTGGGTACCAGGGAAAG
ACGGGCAGAAGTCTCTTCGGCTCGTCGACTTCTCTCTGCCGATGTGGGCA
GGCGACCGGACGTCCTGCGGGTGCTTGAGCCACACCGAGCTCAAATGGGG
GAAGGAGGGGCTGGCGGTGTCCGGGGGGGCAAGCATGGCGGGCGCTCTGG
CGGCTGCTCTTGGGAATGAGGCGGCGGTGAGCGGACGAACGGAGATTAAT
GCTCTATTAATAGGCGGTTTGGATGGATGTTGAACCATTGTATTAATAGT
GCGTGCGTGCTGTGTTTTTGGTTTGGGCGGCGGGAGGGCGTCGCATTGAA
CCGCCCTGTAGCCAACTGGATAGTCCGCAGTCGGAAGGATTGGACCAATC
ATAATCATCCAACATGTCTGTCTCTCTCTCTCTGTATCTTTGTATCTCCC
CGGTGCAATCAACGTGTCCAGCCTTATTTGCATTGTTTCCGTAGGTCGGA
GGCAGCGGAGTGGAGTCCTTTCCTCACCTCTCGAGGCAGTTTTCGCTGGG
GTTTGCTTGCTTACGCTCTCGATTCCGCTTTCCGGGACGGAGGTTTAGAC
GAGAAGAAAAATGCCTCACTTCGAGTTGGAAACCCCGACCCTCCCGTAAC
CGAGACGTTGCCGCCACTGATCCCAAACCGTCGGGACGCACTGCTTCGTA
CGCATTTTCTGGGAATGTTCGTGGAGGGGTCAACAAATTTTTGATGAAAT
GCTTGGCTTGTATTATTCGCGTTCGTCGGTATTGAGAACGGCCTCTCGGA
CTCACAGAGCGATCGGTGCGTTTCAGTTGTTGCTCTTATCCTTCTGTGCC
ATATGTGGAGTGAAATTTGAATTTTTTCTCAGCGGATGTTCGGATCCTTG
GTTTCATTCCGTGGCGGCGGAGGCCTACTTGTGCTGAGCCTTCTTGTGCT
CAAGTATTCTGCCGTGTATATAGAAGCATATACAATATGATACAATGGAT
GTGTCTGAGTTATGTTGACTCGCTTGACACTTTGCGCACCTGACCAAAAG
TCGGGTCTGAATAGTGTTTAAAACCGATCGGCCATATATACGTGTTTAAA
ATCAATCACGCAATCAAGAGCCACGTGACCACCGCTCCTTCACCGTGTTA
TAACTTTCCGCATCCTTCGCGGCATAGCGCAAACCCTTCCGCGAAATTTC
TGTGCATGGCCGCCTGACACAACACGTGACCCTCCTTGCTCCTGATCGAT
CGCCAGCGACACGAGATGGACGCTATCGAAAGCAAAATTCAGTCACGTGG
GGTACCTCAGCCTATCGGAGACCTCCCGCGGCAGGTGAGAACCTCAGCGC
GCGGCTGGTGCCCTCGCGCGCGAATTCTGAAACGCGCGCCCTCTCGTGCC
CTTCAATTTCCGGAGACATGCCCCGAGGATCCGACCCTGCGGTGGTGACC
GATGGGTTGCCGTGTTATGGGAGAACATTTATCGTGGCGCGTTTCGACAT
TTTATGCACTTTGGGCGTCCGTGTGGGGTTCGGCGTTGAGAGTTTTGGGC
ACAGAATGCGCTCAAACGGGTGTTGACAATGATAATAAGTAGTGGCTACA
ACAGACAGCAGCGGAAGCTGGAGCAGTTGTGCTGGCATGTATGTCACTGA
CCGCAATGACACCCGTGGTTGAGTACAATGGATCCAAATATCTGTCAATC
AATACCTCGGCATGGCAACAATCAAGCGGAGTAAGGACTAATCATGGCTG
TTGCTGATGAATTCGTTTTCTCTCGCCGTCCTGCCCTCGCGGAATGGCGC
ACCTAGGTATCGTGCATGGTGACCATGAAGCCGTCCGAGCGGATGGGCTT
GCGACTGCGAGATCTGCACCCGGGCTGCGGCGGAGGCGTCGTGGTTGTGG
GGTTCGAGTCGAAGGCGGCGGGGAAGCGGGCGGGCATTAAGCAGGGCGAC
CGCATCGTTCGTGTGGAGGGTGAGTCGCGAGTGTGCTGCGGGTGCCGGCC
GCTGTTCTGTCTGCGTTTTTCGCCCTCGCGATTTCGTCGAGGCTCTGGTT
CCGTGGTTCTTCAGCTCCACCGCACCCTCAAACTGTTTTATTTCGGTACC
TTTTAGTATTTGTTGTCTCATGTGTGGTCCATCTACAAATAGCGTGCGTG
TCGTCTGTGGGACCACGGCGGAAAGCATGTAAAACAATTCCGCAGTAAGG
CTGGCATGGAAAAATGCTTGCTTTTGCGCTCGCTGTTCAGGCCACATTTC
CTCTGTTGTTAACCCTATCATACATGTATTCGTTTATTAATTACTTGACG
GACAACTATTTATTATTTCTTGTACCATAGTAAGTACCAGGGACGGTACG
GTGTATCGTAGAAGTCGAGTTCTGATTTGTTATATTTCTCCTTTACTCTT
TCCGTATCTGACCACAAGTCGGGCCGGATTATCAATCAAGTTGCTCTCCA
GCAAACGCGGAGCACCAACCTGCTGAGACGACCGCCTCTCAGACCTTGTC
TCTATCGTCGCGCTCGCTCGCTCGCTCGCCCTCCCCCGATCCATTCTCGC
AGACGTTGCTGTCGGTAGGACTTCCGACATCATCTGGGCGATGTCTCAGG
CCCCGGCGGAGTCTAGCGACGGCGCCGGTAGATCTGTTCTTCTGACGCTC
CTCCGCGGCTTCCCGAAGAGTGACAGACCGTGGCTGCCGCCGTTGGACCC
TTCTCCGGCGCCAACCATCTTGTCCCCGCCTAGCAGCGCCGTGGAATCCC
GGAGCGACGAGGACTTTTCGCCTCTCGCGGTTCTGTCCGCGCCCGGAAGC
AAAACTTTCAGCGGAAACTTTTCCTCGGTTCATAGGCCAGGCTTTGGCGG
GGAGAGCAGTGGCGCCAAGGACAACGGCGTGAGAGGAAGCTTGCCCGACG
CGACGGGGTTGGGGGAAGGGTCGCCGATGCTCGGCGGCATGGGGCTCTTG
GGGGCGGCTCCTCCGAGCCCTGCTGCCAAGGTAAGCCTCTCGGTCGCGCC
CCCTAGCCCTGAGGACAAGGCAGAGTTGGAGGTTCCGTTGGACGTTCCGT
TGGACGTTCCGGTGGATCTGAGCGGCGACCTGAGTGGCTCGGGGCACGGA
ACCGGAGATTCGGCCGACAGCAGCGCCGGGCGCGCGAAGGGCCCCGCACC
ACCGCAAGCGAACGTCAACGCGGGCGGCGACCCCGCGAAGCCGTTCTCGG
CGCACAACCGCAAGCTCTCGCACCAGGGGAGGTTATTGCCGGGGAGCTTA
GGCGCAGGCGTCGGTATCGCACTGGAGGCGTGCTGGGCCTGCCACCCGGA
TGACCGTTCCCCCATGTCCGACGACGAAAACTCTAGACCGATGGTGTACA
AGCCAGAGGAGGTATCCGCGGCGGTGGCGGACACCGACAGGCCCACCAGC
GAGTCCATCGAGAAGCTCAGGGGCGCCGTGGTCGGTACCTGCATTGGCGT
AGCCGCAGCAGACGAGGGGGGGGGGGAGGAGGAAGAGTTTCAGGACACGC
GTTCGAACGATTCCGGGTCGAGCGATGCGTCGTCCCTCTTCCTGACCGCT
GTGTCTCCTTCTCGTATACCCCCGCCCCTCGTCTCCATAGCCTCCTCGAT
GCCTGCCCCGCCCGTATCTATGACGTCATCG back to topCoding sequence (CDS) from alignment at S-dermatodea_contig9523:4741..8421- >mRNA_S-dermatodea_contig9523.17545.1 ID=mRNA_S-dermatodea_contig9523.17545.1|Name=mRNA_S-dermatodea_contig9523.17545.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3240bp|location=Sequence derived from alignment at S-dermatodea_contig9523:4741..8421- (Saccorhiza dermatodea SderLu1190fm monoicous) ATGAGCCGCCTGTCGAGGTGGTCGATGGGTTCCACACACGGGCCCCTCGT AGCGTCAGCACCGCGATCCGTTTGGGTACCAGGGAAAGACGGGCAGAAGT CTCTTCGGCTCGTCGACTTCTCTCTGCCGATGTGGGCAGGCGACCGGACG TCCTGCGGGTGCTTGAGCCACACCGAGCTCAAATGGGGGAAGGAGGGGCT GGCGGTGTCCGGGGGGGCAAGCATGGCGGGCGCTCTGGCGGCTGCTCTTG GGAATGAGGCGGCGATGAGCCGCCTGTCGAGGTGGTCGATGGGTTCCACA CACGGGCCCCTCGTAGCGTCAGCACCGCGATCCGTTTGGGTACCAGGGAA AGACGGGCAGAAGTCTCTTCGGCTCGTCGACTTCTCTCTGCCGATGTGGG CAGGCGACCGGACGTCCTGCGGGTGCTTGAGCCACACCGAGCTCAAATGG GGGAAGGAGGGGCTGGCGGTGTCCGGGGGGGCAAGCATGGCGGGCGCTCT GGCGGCTGCTCTTGGGAATGAGGCGGCGTGGAGTCCTTTCCTCACCTCTC GAGGCAGTTTTCGCTGGGGTTTGCTTGCTTACGCTCTCGATTCCGCTTTC CGGGACGGAGGTTTAGACGAGAAGAAAAATGCCTCACTTCGATGGAGTCC TTTCCTCACCTCTCGAGGCAGTTTTCGCTGGGGTTTGCTTGCTTACGCTC TCGATTCCGCTTTCCGGGACGGAGGTTTAGACGAGAAGAAAAATGCCTCA CTTCGAGTATCGTGCATGGTGACCATGAAGCCGTCCGAGCGGATGGGCTT GCGACTGCGAGATCTGCACCCGGGCTGCGGCGGAGGCGTCGTGGTTGTGG GGTTCGAGTCGAAGGCGGCGGGGAAGCGGGCGGGCATTAAGCAGGGCGAC CGCATCGTTCGTGTGGAGGGTATCGTGCATGGTGACCATGAAGCCGTCCG AGCGGATGGGCTTGCGACTGCGAGATCTGCACCCGGGCTGCGGCGGAGGC GTCGTGGTTGTGGGGTTCGAGTCGAAGGCGGCGGGGAAGCGGGCGGGCAT TAAGCAGGGCGACCGCATCGTTCGTGTGGAGGACGTTGCTGTCGGTAGGA CTTCCGACATCATCTGGGCGATGTCTCAGGCCCCGGCGGAGTCTAGCGAC GGCGCCGGTAGATCTGTTCTTCTGACGCTCCTCCGCGGCTTCCCGAAGAG TGACAGACCGTGGCTGCCGCCGTTGGACCCTTCTCCGGCGCCAACCATCT TGTCCCCGCCTAGCAGCGCCGTGGAATCCCGGAGCGACGAGGACTTTTCG CCTCTCGCGGTTCTGTCCGCGCCCGGAAGCAAAACTTTCAGCGGAAACTT TTCCTCGGTTCATAGGCCAGGCTTTGGCGGGGAGAGCAGTGGCGCCAAGG ACAACGGCGTGAGAGGAAGCTTGCCCGACGCGACGGGGTTGGGGGAAGGG TCGCCGATGCTCGGCGGCATGGGGCTCTTGGGGGCGGCTCCTCCGAGCCC TGCTGCCAAGGTAAGCCTCTCGGTCGCGCCCCCTAGCCCTGAGGACAAGG CAGAGTTGGAGGTTCCGTTGGACGTTCCGTTGGACGTTCCGGTGGATCTG AGCGGCGACCTGAGTGGCTCGGGGCACGGAACCGGAGATTCGGCCGACAG CAGCGCCGGGCGCGCGAAGGGCCCCGCACCACCGCAAGCGAACGTCAACG CGGGCGGCGACCCCGCGAAGCCGTTCTCGGCGCACAACCGCAAGCTCTCG CACCAGGGGAGGTTATTGCCGGGGAGCTTAGGCGCAGGCGTCGGTATCGC ACTGGAGGCGTGCTGGGCCTGCCACCCGGATGACCGTTCCCCCATGTCCG ACGACGAAAACTCTAGACCGATGGTGTACAAGCCAGAGGAGGTATCCGCG GCGGTGGCGGACACCGACAGGCCCACCAGCGAGTCCATCGAGAAGCTCAG GGGCGCCGTGGTCGGTACCTGCATTGGCGTAGCCGCAGCAGACGAGGGGG GGGGGGAGGAGGAAGAGTTTCAGGACACGCGTTCGAACGATTCCGGGTCG AGCGATGCGTCGTCCCTCTTCCTGACCGCTGTGTCTCCTTCTCGTATACC CCCGCCCCTCGTCTCCATAGCCTCCTCGATGCCTGCCCCGCCCGTATCTA TGACGTCATCGACGTTGCTGTCGGTAGGACTTCCGACATCATCTGGGCGA TGTCTCAGGCCCCGGCGGAGTCTAGCGACGGCGCCGGTAGATCTGTTCTT CTGACGCTCCTCCGCGGCTTCCCGAAGAGTGACAGACCGTGGCTGCCGCC GTTGGACCCTTCTCCGGCGCCAACCATCTTGTCCCCGCCTAGCAGCGCCG TGGAATCCCGGAGCGACGAGGACTTTTCGCCTCTCGCGGTTCTGTCCGCG CCCGGAAGCAAAACTTTCAGCGGAAACTTTTCCTCGGTTCATAGGCCAGG CTTTGGCGGGGAGAGCAGTGGCGCCAAGGACAACGGCGTGAGAGGAAGCT TGCCCGACGCGACGGGGTTGGGGGAAGGGTCGCCGATGCTCGGCGGCATG GGGCTCTTGGGGGCGGCTCCTCCGAGCCCTGCTGCCAAGGTAAGCCTCTC GGTCGCGCCCCCTAGCCCTGAGGACAAGGCAGAGTTGGAGGTTCCGTTGG ACGTTCCGTTGGACGTTCCGGTGGATCTGAGCGGCGACCTGAGTGGCTCG GGGCACGGAACCGGAGATTCGGCCGACAGCAGCGCCGGGCGCGCGAAGGG CCCCGCACCACCGCAAGCGAACGTCAACGCGGGCGGCGACCCCGCGAAGC CGTTCTCGGCGCACAACCGCAAGCTCTCGCACCAGGGGAGGTTATTGCCG GGGAGCTTAGGCGCAGGCGTCGGTATCGCACTGGAGGCGTGCTGGGCCTG CCACCCGGATGACCGTTCCCCCATGTCCGACGACGAAAACTCTAGACCGA TGGTGTACAAGCCAGAGGAGGTATCCGCGGCGGTGGCGGACACCGACAGG CCCACCAGCGAGTCCATCGAGAAGCTCAGGGGCGCCGTGGTCGGTACCTG CATTGGCGTAGCCGCAGCAGACGAGGGGGGGGGGGAGGAGGAAGAGTTTC AGGACACGCGTTCGAACGATTCCGGGTCGAGCGATGCGTCGTCCCTCTTC CTGACCGCTGTGTCTCCTTCTCGTATACCCCCGCCCCTCGTCTCCATAGC CTCCTCGATGCCTGCCCCGCCCGTATCTATGACGTCATCG back to top
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