mRNA_S-dermatodea_contig9505.17536.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9505.17536.1 vs. uniprot
Match: D8LKY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKY0_ECTSI) HSP 1 Score: 259 bits (661), Expect = 8.650e-77 Identity = 138/165 (83.64%), Postives = 140/165 (84.85%), Query Frame = 1
Query: 1 PKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEASRDLIQKVRRLGMLRVLLCLKQVALDKNVTNVVTNPQNDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIECSKEARSLNMIVTELYLD 495
PKN CVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQS ASR+LIQKV TNVVTNP NDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIE +KEARSLNMIVTELYLD
Sbjct: 173 PKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSAASRELIQKV---------------------TNVVTNPVNDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSLNMIVTELYLD 316
BLAST of mRNA_S-dermatodea_contig9505.17536.1 vs. uniprot
Match: A0A835ZAP1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAP1_9STRA) HSP 1 Score: 230 bits (587), Expect = 1.410e-67 Identity = 120/170 (70.59%), Postives = 135/170 (79.41%), Query Frame = 1
Query: 1 PKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEASRDLIQKVRRLGMLRVLLCLKQVALDKNVTNVVTNPQNDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIECSKEARSLNMIVTELYLD*SPPV 510
PKNYC+LGTRHCSFLHQQIIELLAYALVLSGNHVFTSGA GTNAATIRGALRAER +LLTVVLPQSL KQS+ S++L+ +V+ NV+ PQNDHLPLD ASRLCNSDLLSR +QLICFAFHDS TIIE ++EAR+L+MIVTEL+LD PV
Sbjct: 53 PKNYCILGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAGGTNAATIRGALRAERPDLLTVVLPQSLAKQSDESQELLTQVQ---------------------NVIDAPQNDHLPLDVASRLCNSDLLSRADQLICFAFHDSHTIIETAREARALDMIVTELFLDRGGPV 201
BLAST of mRNA_S-dermatodea_contig9505.17536.1 vs. uniprot
Match: A0A6V2EYW5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2EYW5_9STRA) HSP 1 Score: 207 bits (527), Expect = 6.530e-58 Identity = 107/165 (64.85%), Postives = 129/165 (78.18%), Query Frame = 1
Query: 1 PKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEASRDLIQKVRRLGMLRVLLCLKQVALDKNVTNVVTNPQNDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIECSKEARSLNMIVTELYLD 495
P+ YCVLGTRHCSFLHQQIIELLAYALVLSGNHV+TSGA GTNAA IRGA+RAER +LLTVVLPQSL KQ++ S++L+ K+VT++VT PQND + LD ASR+CNS LLS+T+QLI FAFH+S+T+IE SKEA+ L+M+VT LYLD
Sbjct: 133 PQKYCVLGTRHCSFLHQQIIELLAYALVLSGNHVYTSGASGTNAAAIRGAIRAERPDLLTVVLPQSLNKQTKESQELL---------------------KDVTDLVTMPQNDDMSLDVASRICNSYLLSQTDQLISFAFHESQTVIEASKEAQKLDMLVTTLYLD 276
BLAST of mRNA_S-dermatodea_contig9505.17536.1 vs. uniprot
Match: A0A7S2I159_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I159_9STRA) HSP 1 Score: 207 bits (527), Expect = 2.330e-57 Identity = 107/165 (64.85%), Postives = 129/165 (78.18%), Query Frame = 1
Query: 1 PKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEASRDLIQKVRRLGMLRVLLCLKQVALDKNVTNVVTNPQNDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIECSKEARSLNMIVTELYLD 495
P+ YCVLGTRHCSFLHQQIIELLAYALVLSGNHV+TSGA GTNAA IRGA+RAER +LLTVVLPQSL KQ++ S++L+ K+VT++VT PQND + LD ASR+CNS LLS+T+QLI FAFH+S+T+IE SKEA+ L+M+VT LYLD
Sbjct: 176 PQKYCVLGTRHCSFLHQQIIELLAYALVLSGNHVYTSGASGTNAAAIRGAIRAERPDLLTVVLPQSLHKQTKESQELL---------------------KDVTDLVTMPQNDDMSLDVASRICNSYLLSQTDQLISFAFHESQTVIEASKEAQKLDMLVTTLYLD 319
BLAST of mRNA_S-dermatodea_contig9505.17536.1 vs. uniprot
Match: B8C532_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C532_THAPS) HSP 1 Score: 198 bits (503), Expect = 4.750e-56 Identity = 99/165 (60.00%), Postives = 124/165 (75.15%), Query Frame = 1
Query: 1 PKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEASRDLIQKVRRLGMLRVLLCLKQVALDKNVTNVVTNPQNDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIECSKEARSLNMIVTELYLD 495
PK YC+LGTRHCSFLHQQI+E+LAYALVLSGNH++TSGA GTNAA IRGALRA + LLTVVLPQS+ KQ+ S++L++ +VTNV+T PQND +PLD ASR+CNS LLS+T+ LI FAFH+S T++E ++EA+ L M+VT LYLD
Sbjct: 18 PKKYCILGTRHCSFLHQQIVEMLAYALVLSGNHLYTSGAAGTNAAAIRGALRAFQPHLLTVVLPQSMAKQTPESQELLE---------------------DVTNVITMPQNDQMPLDVASRICNSHLLSQTDHLISFAFHESTTVLEAAEEAQKLEMLVTLLYLD 161
BLAST of mRNA_S-dermatodea_contig9505.17536.1 vs. uniprot
Match: A0A448ZCS9_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZCS9_9STRA) HSP 1 Score: 204 bits (520), Expect = 4.960e-56 Identity = 104/165 (63.03%), Postives = 127/165 (76.97%), Query Frame = 1
Query: 1 PKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEASRDLIQKVRRLGMLRVLLCLKQVALDKNVTNVVTNPQNDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIECSKEARSLNMIVTELYLD 495
P+ YC+LGTRHCS+LHQQIIELLAYALVLSGNHV+TSGA GTNAAT+RGALRAER++LLTVVLPQSL KQ+ S++L++KV +++T PQND L LD ASR+CNS LLS T+QL+ FAFH+S T+IE SKEA+ L+M+VT LYLD
Sbjct: 203 PQKYCILGTRHCSYLHQQIIELLAYALVLSGNHVYTSGAPGTNAATVRGALRAEREDLLTVVLPQSLSKQTSESQELLKKV---------------------DDLITMPQNDELSLDVASRICNSYLLSLTDQLVSFAFHESTTVIEASKEAKKLDMLVTTLYLD 346
BLAST of mRNA_S-dermatodea_contig9505.17536.1 vs. uniprot
Match: A0A1E7FA35_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FA35_9STRA) HSP 1 Score: 197 bits (500), Expect = 1.410e-55 Identity = 100/165 (60.61%), Postives = 126/165 (76.36%), Query Frame = 1
Query: 1 PKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEASRDLIQKVRRLGMLRVLLCLKQVALDKNVTNVVTNPQNDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIECSKEARSLNMIVTELYLD 495
P+ Y +LGTRHCS+LHQQIIELLAYALVLSGNHVFTSGA GT+AA +RGALRAER++LLTVVLPQS+ KQ++ S++L+ KV +V+T PQND + LD ASR+CNS +LS T+QLI FAFH+S T++E SKEA++L+M+VT LYLD
Sbjct: 21 PQKYSILGTRHCSYLHQQIIELLAYALVLSGNHVFTSGAGGTHAAAVRGALRAEREDLLTVVLPQSMSKQTKESQELLDKV---------------------DDVITMPQNDDMSLDVASRICNSYILSLTDQLISFAFHESNTVVEASKEAKALDMLVTTLYLD 164
BLAST of mRNA_S-dermatodea_contig9505.17536.1 vs. uniprot
Match: A0A7S2XNC9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNC9_9STRA) HSP 1 Score: 202 bits (513), Expect = 1.500e-55 Identity = 104/165 (63.03%), Postives = 129/165 (78.18%), Query Frame = 1
Query: 1 PKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEASRDLIQKVRRLGMLRVLLCLKQVALDKNVTNVVTNPQNDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIECSKEARSLNMIVTELYLD 495
P+ YCVLGTRHCSFLHQQIIELLAYALVLSGNHV+TSGA GT+AATIRGALRAER +LLTVV+PQSL KQ++ S++L+ K+VT+++T PQND + LD ASR+CNS LLS+++QLI FAFH+S T+IE +KEA+ L+M+VT LYLD
Sbjct: 161 PQKYCVLGTRHCSFLHQQIIELLAYALVLSGNHVYTSGAGGTHAATIRGALRAERPDLLTVVVPQSLGKQAKESQELL---------------------KDVTDLITMPQNDDMSLDVASRICNSYLLSQSDQLISFAFHESTTVIEATKEAKELDMLVTTLYLD 304
BLAST of mRNA_S-dermatodea_contig9505.17536.1 vs. uniprot
Match: A0A7R9YDI6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDI6_9STRA) HSP 1 Score: 199 bits (506), Expect = 2.260e-55 Identity = 107/165 (64.85%), Postives = 122/165 (73.94%), Query Frame = 1
Query: 1 PKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEASRDLIQKVRRLGMLRVLLCLKQVALDKNVTNVVTNPQNDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIECSKEARSLNMIVTELYLD 495
PK+YC+LGTRHCSFLHQQIIELLAYALVLSGNHV+TSGA GTNAA IRGALRA +LLTVVLPQS+ KQ S+ L+ KV+ NVV QND L LD ASRLCNSDLLSR EQLI FAFH+S+T+IE +KEA+S +M+VT LYLD
Sbjct: 98 PKSYCILGTRHCSFLHQQIIELLAYALVLSGNHVYTSGAGGTNAAAIRGALRAGAPDLLTVVLPQSISKQPAESQKLLAKVK---------------------NVVEMSQNDGLGLDMASRLCNSDLLSRAEQLIAFAFHNSRTVIEATKEAQSRDMVVTVLYLD 241
BLAST of mRNA_S-dermatodea_contig9505.17536.1 vs. uniprot
Match: A0A7R9WLF4_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WLF4_9STRA) HSP 1 Score: 200 bits (508), Expect = 1.330e-54 Identity = 102/165 (61.82%), Postives = 129/165 (78.18%), Query Frame = 1
Query: 1 PKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEASRDLIQKVRRLGMLRVLLCLKQVALDKNVTNVVTNPQNDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIECSKEARSLNMIVTELYLD 495
P+ YC+LGTRHCS+LHQQIIELLAYALVLSGNHV+TSGA GT+AATIRGALRAER++LLTVVLPQSLEKQ + S++L++KV +++ PQND + LD ASR+CNS LLS+T+QLI FAFH+S T+IE +KEA++L+M+VT L+LD
Sbjct: 180 PQKYCILGTRHCSYLHQQIIELLAYALVLSGNHVYTSGAGGTHAATIRGALRAEREDLLTVVLPQSLEKQPKESQELLEKV---------------------DDLIEMPQNDGMSLDVASRICNSYLLSQTDQLISFAFHESTTVIEATKEAKTLDMLVTTLFLD 323 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9505.17536.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9505.17536.1 >prot_S-dermatodea_contig9505.17536.1 ID=prot_S-dermatodea_contig9505.17536.1|Name=mRNA_S-dermatodea_contig9505.17536.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=127bp MGTNAATIRGALRAERKELLTVVLPQSLEKQSEASRDLIQKVRRLGMLRVback to top mRNA from alignment at S-dermatodea_contig9505:4410..7557- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9505.17536.1 ID=mRNA_S-dermatodea_contig9505.17536.1|Name=mRNA_S-dermatodea_contig9505.17536.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3148bp|location=Sequence derived from alignment at S-dermatodea_contig9505:4410..7557- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9505:4410..7557- >mRNA_S-dermatodea_contig9505.17536.1 ID=mRNA_S-dermatodea_contig9505.17536.1|Name=mRNA_S-dermatodea_contig9505.17536.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=762bp|location=Sequence derived from alignment at S-dermatodea_contig9505:4410..7557- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |