prot_S-dermatodea_contig950.17528.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig950.17528.1
Unique Nameprot_S-dermatodea_contig950.17528.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length334
Homology
BLAST of mRNA_S-dermatodea_contig950.17528.1 vs. uniprot
Match: D7FRR1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR1_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 2.360e-32
Identity = 82/217 (37.79%), Postives = 114/217 (52.53%), Query Frame = 0
Query:   12 HLAAVFLLPFKLHMSRSAAGVSLKTQELYLVVFLVRLVLVINHGGFLWLFRGLETTYISLTGATKLLLTTVTIAMMRGRPSPKASYDASMDSFRHWRYVALPCFVFSILASGWDTIKNDEGYVIMPANPFNICWFFTLVLEPLAIVPQLLLFRRCTEVGRLPWVYFSLLASYRGMLLIYWIWSAQFARVHLERPSTLLRVLLEAALYVAFFVDRVAR 228
            HLAA  LLP+KLH SRSAAGVSLK QELY+VVFL R      +   L++F    + Y S+     + LT +TI M++ RPS KASYDAS+  +       LP                               W F+ VLEPLA+VPQLL+FR  T+ GRL W Y +L+ +YR + ++ W++ +     +   P      +++  +Y+ F VDR  R
Sbjct:   13 HLAATVLLPYKLHTSRSAAGVSLKMQELYMVVFLTR------YSDLLYVF---SSWYNSVMKIAHIFLTGLTIGMLKSRPSLKASYDASLHYY-------LP-------------------------GVLRFAWNFSEVLEPLAVVPQLLVFRGSTDAGRLGWTYVTLMGAYRALYILNWVYLSYNDYAYRHHPLVYAAGIVQTGMYLMFLVDRRVR 188          
BLAST of mRNA_S-dermatodea_contig950.17528.1 vs. uniprot
Match: D8LJM2_ECTSI (PGPS/D6 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJM2_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 3.490e-30
Identity = 78/218 (35.78%), Postives = 116/218 (53.21%), Query Frame = 0
Query:    6 LVANVFHLAAVFLLPFKLHMSRSAAGVSLKTQELYLVVFLVRLVLVINHGGFLWLFRGLETTYISLTGATKLLLTTVTIAMMRGRPSPKASYDASMDSFRHWRYVALPCFVFSILASGWDTIKNDEGYVIMP-ANPFNICWFFTLVLEPLAIVPQLLLFRRCTEVGRLPWVYFSLLASYRGMLLIYWIWSAQFARVHLERPSTLLRVLLEAALYVAFF 222
            L  ++ H A++ +L  KL  S+SAAG+SLKTQEL+LVVF+ R         ++ LF    + Y S+     + LT++ I M+R     KA+YD S DSF HW++   PC    +L   W         V MP ++  N  W F+ VLEP AIVPQL++ +R  EV  L   Y  LL +YR + ++ W++ A +   +       +  L++  LY  FF
Sbjct:    6 LAGDMSHTASILMLLLKLRASKSAAGISLKTQELFLVVFVTR---------YVDLFFRFISWYNSIMKVLYITLTSLIIYMIREHIPIKATYDKSQDSFLHWQFAVAPCAALGLLIHSWSWWT-----VSMPFSSLINFFWTFSEVLEPFAIVPQLMVLQRYREVENLTGHYVFLLGAYRSLYIVNWVYRAHYEAGYQHHVLVYIAGLVQTLLYADFF 209          
BLAST of mRNA_S-dermatodea_contig950.17528.1 vs. uniprot
Match: A0A6V1VUP9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VUP9_HETAK)

HSP 1 Score: 115 bits (287), Expect = 6.730e-27
Identity = 75/217 (34.56%), Postives = 115/217 (53.00%), Query Frame = 0
Query:    6 LVANVFHLAAVFLLPFKLHMSRSAAGVSLKTQELYLVVFLVRLVLVINHGGFLWLFRGLETTYISLTGATKLLLTTVTIAMMRGRPSPKASYDASMDSFRHWRYVALPCFVFSILASGWDTIKNDEGYVIMPANPFNICWFFTLVLEPLAIVPQLLLFRRCTEVGRLPWVYFSLLASYRGMLLIYWIWSAQFARVHLERPSTLLRVLLEAALYVAFF 222
            L  ++ H A++++L ++LH S+SA G+SLKTQEL+LVVF+ R         +L LF    + Y S      L  T+  I +MR +P+ +A+YDAS DSF HW++   P  V  ++ S    + +  G+  M        W F++VLE  AI+PQL++ +R  EV  L   Y   L  YR + L  W++ A     +       L  + + ALY+ FF
Sbjct:    6 LAGDLSHAASIWILLWRLHKSKSALGISLKTQELFLVVFMAR---------YLDLFTHFISLYNSFMKIMYLTSTSAIIYLMRMKPTYRATYDASQDSFLHWQFAVAPSVVLGLIIS----LISAGGFSFM-----EWMWTFSIVLEATAIIPQLIVLQRYREVENLTGNYIFALGLYRALYLCNWVYRAYHEPNYQHSYVAYLCGVAQTALYIDFF 204          
BLAST of mRNA_S-dermatodea_contig950.17528.1 vs. uniprot
Match: A0A835Z6E1_9STRA (ER lumen protein retaining receptor-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6E1_9STRA)

HSP 1 Score: 112 bits (280), Expect = 6.800e-26
Identity = 73/217 (33.64%), Postives = 115/217 (53.00%), Query Frame = 0
Query:    6 LVANVFHLAAVFLLPFKLHMSRSAAGVSLKTQELYLVVFLVRLVLVINHGGFLWLFRGLETTYISLTGATKLLLTTVTIAMMRGRPSPKASYDASMDSFRHWRYVALPCFVFSILASGWDTIKNDEGYVIMPANPFNICWFFTLVLEPLAIVPQLLLFRRCTEVGRLPWVYFSLLASYRGMLLIYWIWSAQFARVHLERPSTLLRVLLEAALYVAFF 222
            LV ++ HLA++ LL  KL  S++A+G+SLKTQEL+L VF+ R         +L LF    + Y S+     + LT + I MMR +   + +YDAS D+F H +Y   PC   + L          +G+ +      ++ W F++ LE +AIVPQL++ +R  EV  L   Y   L +YR + ++ WI+ +   R +          +++ ALYV FF
Sbjct:    6 LVGDLCHLASILLLLLKLRASKNASGISLKTQELFLAVFVCR---------YLDLFTTFYSVYNSVMKVLYIALTALIIHMMRAQSPIRGTYDASQDTFLHVKYAVAPCAALAALT------MLVQGFDVR-----DLFWNFSIYLEAIAIVPQLIVLQRYREVENLTGHYIFFLGAYRALYILNWIYRSFHERGYKHHYVVYFAGIVQTALYVDFF 202          
BLAST of mRNA_S-dermatodea_contig950.17528.1 vs. uniprot
Match: A0A7S3ZPQ8_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPQ8_9STRA)

HSP 1 Score: 112 bits (279), Expect = 4.880e-25
Identity = 70/211 (33.18%), Postives = 111/211 (52.61%), Query Frame = 0
Query:   12 HLAAVFLLPFKLHMSRSAAGVSLKTQELYLVVFLVRLVLVINHGGFLWLFRGLETTYISLTGATKLLLTTVTIAMMRGRPSPKASYDASMDSFRHWRYVALPCFVFSILASGWDTIKNDEGYVIMPANPFNICWFFTLVLEPLAIVPQLLLFRRCTEVGRLPWVYFSLLASYRGMLLIYWIWSAQFARVHLERPSTLLRVLLEAALYVAFF 222
            H+ ++ +L  +L  S+SA G+SLKTQEL+L+VF+ R         +L LF    + Y S      +  TT  I M+R +   K+ YDAS DSF H ++   PC   ++ A     +K +        +P +I W F++ LE LAIVPQL + +R  EV  L   Y   L +YRG+ ++ W++ + + + +       +   ++ ALYV FF
Sbjct:   85 HVVSILVLLLRLRSSKSAVGISLKTQELFLIVFVTR---------YLDLFTTFYSLYNSFMKVAYIASTTYIIWMIRFQEPYKSKYDASQDSFLHIKFAVAPCAGLALFAC---LVKGE-------LSPIDILWTFSIFLEALAIVPQLFVLQRYREVENLTGHYVFFLGAYRGLYILNWVYRSYYEQFYRHNWLVYVSGAVQTALYVDFF 276          
BLAST of mRNA_S-dermatodea_contig950.17528.1 vs. uniprot
Match: F0YI66_AURAN (Uncharacterized protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI66_AURAN)

HSP 1 Score: 109 bits (273), Expect = 7.170e-25
Identity = 67/211 (31.75%), Postives = 110/211 (52.13%), Query Frame = 0
Query:   12 HLAAVFLLPFKLHMSRSAAGVSLKTQELYLVVFLVRLVLVINHGGFLWLFRGLETTYISLTGATKLLLTTVTIAMMRGRPSPKASYDASMDSFRHWRYVALPCFVFSILASGWDTIKNDEGYVIMPANPFNICWFFTLVLEPLAIVPQLLLFRRCTEVGRLPWVYFSLLASYRGMLLIYWIWSAQFARVHLERPSTLLRVLLEAALYVAFF 222
            H+ ++ +L  +L +S+SA G+SLKTQEL+L+VF+ R         +L LF    + Y S      +  T   I M+R +   K+ YD S DSF H+++   PC + ++ +     IK +        NP ++ W F++ LE LAIVPQL + +R  EV  L   Y   L +YR + ++ W++ + +   +       +   ++ ALYV FF
Sbjct:   12 HVVSIIVLILRLRVSKSAVGISLKTQELFLIVFMTR---------YLDLFTTFYSMYNSFMKVAYITATASIIYMIRFKEPYKSKYDKSQDSFLHFKFAVAPCAMLALFSC---LIKRE-------LNPVDVLWTFSIFLEALAIVPQLFVLQRYREVENLTGHYVFFLGAYRFLYILNWVYRSYYEPFYRHNWLVYISGAIQTALYVDFF 203          
BLAST of mRNA_S-dermatodea_contig950.17528.1 vs. uniprot
Match: ERD2A_ARATH (ER lumen protein-retaining receptor A n=29 Tax=Brassicaceae TaxID=3700 RepID=ERD2A_ARATH)

HSP 1 Score: 108 bits (270), Expect = 1.720e-24
Identity = 72/211 (34.12%), Postives = 109/211 (51.66%), Query Frame = 0
Query:   12 HLAAVFLLPFKLHMSRSAAGVSLKTQELYLVVFLVRLVLVINHGGFLWLFRGLETTYISLTGATKLLLTTVTIAMMRGRPSPKASYDASMDSFRHWRYVALPCFVFSILASGWDTIKNDEGYVIMPANPFNICWFFTLVLEPLAIVPQLLLFRRCTEVGRLPWVYFSLLASYRGMLLIYWIWSAQFARVHLERPSTLLRVLLEAALYVAFF 222
            HL +V +L  K++ ++S AG+SLKTQELY +VFL R         +L LF    + Y S+     +  +   +  MR  P  + SYD  +D+FRH +YV L CFV  ++ +   T++              + W F++ LE +AI+PQL+L +R   V  L   Y   L +YRG+ +I WI+   F   H  R    +  L++ ALY  FF
Sbjct:   12 HLISVLILLLKIYATKSCAGISLKTQELYALVFLTR---------YLDLFTDYVSLYNSIMKIVFIASSLAIVWCMRRHPLVRRSYDKDLDTFRH-QYVVLACFVLGLILNEKFTVQE-------------VFWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVVFLGAYRGLYIINWIYR-YFTEDHFTRWIACVSGLVQTALYADFF 198          
BLAST of mRNA_S-dermatodea_contig950.17528.1 vs. uniprot
Match: A0A6J0KGP7_RAPSA (ER lumen protein-retaining receptor n=5 Tax=Brassicales TaxID=3699 RepID=A0A6J0KGP7_RAPSA)

HSP 1 Score: 107 bits (267), Expect = 4.670e-24
Identity = 73/215 (33.95%), Postives = 112/215 (52.09%), Query Frame = 0
Query:   12 HLAAVFLLPFKLHMSRSAAGVSLKTQELYLVVFLVRLVLVINHGGFLWLFRGLETTYISLTGAT-KLLLTTVTIAM---MRGRPSPKASYDASMDSFRHWRYVALPCFVFSILASGWDTIKNDEGYVIMPANPFNICWFFTLVLEPLAIVPQLLLFRRCTEVGRLPWVYFSLLASYRGMLLIYWIWSAQFARVHLERPSTLLRVLLEAALYVAFF 222
            HL ++ +L  K++ ++S AG+SLKTQELY +VFL R             +  L T Y+SL     K++    ++A+   MR  P  + SYD  +D+FRH +YV L CFV +++ +   T +              + W F++ LE +AI+PQL+L +R   V  L   Y   L +YRG+ +I WI+   F   H  R    +  L++ ALY  FF
Sbjct:   12 HLISILILLLKIYATKSCAGISLKTQELYALVFLTR-------------YMDLVTDYVSLYNTVMKIVFIVSSLAIVWCMRRHPLVRRSYDKDLDTFRH-QYVVLACFVLALVLNEKFTFQE-------------VFWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVLFLGAYRGLYIINWIYR-YFTEDHFTRWIACVSGLVQTALYADFF 198          
BLAST of mRNA_S-dermatodea_contig950.17528.1 vs. uniprot
Match: A0A067CH71_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CH71_SAPPC)

HSP 1 Score: 107 bits (267), Expect = 4.900e-24
Identity = 75/221 (33.94%), Postives = 117/221 (52.94%), Query Frame = 0
Query:    6 LVANVFHLAAVFLLPFKLHMSRSAAGVSLKTQELYLVVFLVRLVLVINHGGFLWLFRGLETTYISLTGAT-KLLLTTVT---IAMMRGRPSPKASYDASMDSFRHWRYVALPCFVFSILASGWDTIKNDEGYVIMPANPFNICWFFTLVLEPLAIVPQLLLFRRCTEVGRLPWVYFSLLASYRGMLLIYWIWSAQFARVHLERPSTLLRVLLEAALYVAFF 222
            ++ ++ H+A+  ++  +L   RSA+G+SLK+QEL+ +V + R             +  L T Y+SL   T KLL  T+T   + ++R +   K+SYD S+DSF HW++  LPC + +I       I N+   V+       I W F++ LE +AIVPQL+L +R  EV  L   Y  LL  YRG  L+ WI+ A     +       +  +++  LYV FF
Sbjct:    6 MLGDITHVASFVVMLLRLQAGRSASGISLKSQELFFLVCVTR-------------YLDLFTHYVSLYNTTMKLLYLTLTGAIVYLIRYKEPFKSSYDKSLDSFLHWKFAVLPCAILAI-------IFNERFEVL------EILWTFSIYLEAVAIVPQLILLQRHGEVENLTSNYVVLLGMYRGFYLLNWIYRAATESQYHTIWLMFIAGIVQTGLYVDFF 200          
BLAST of mRNA_S-dermatodea_contig950.17528.1 vs. uniprot
Match: W4G348_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G348_9STRA)

HSP 1 Score: 106 bits (265), Expect = 9.520e-24
Identity = 72/217 (33.18%), Postives = 113/217 (52.07%), Query Frame = 0
Query:    6 LVANVFHLAAVFLLPFKLHMSRSAAGVSLKTQELYLVVFLVRLVLVINHGGFLWLFRGLETTYISLTGATKLLLTTVTIAMMRGRPSPKASYDASMDSFRHWRYVALPCFVFSILASGWDTIKNDEGYVIMPANPFNICWFFTLVLEPLAIVPQLLLFRRCTEVGRLPWVYFSLLASYRGMLLIYWIWSAQFARVHLERPSTLLRVLLEAALYVAFF 222
            L+ ++ HL +  ++  +L  SRSA G+SLK+QEL+ +VF+ R + +  H   L+    ++  Y+ L+GA         +  +R +   K+SYD S+DSF HW++  LPC + +++          E   +M      I W F+L LE +AI+PQL+L +R  EV  L   Y  LL  YR   LI WI+ A     +       +  L++  LYV FF
Sbjct:    6 LIGDMTHLLSFLVMILRLQASRSATGISLKSQELFFLVFITRYLDLFTHYVSLYN-TSMKLLYLGLSGAI--------VYFIRFKEPFKSSYDKSIDSFLHWKFAVLPCAILALIF--------HERLEVM-----EILWTFSLYLEAVAIIPQLILLQRHGEVENLTSNYVVLLGIYRAFYLINWIYRAATETQYHTIWPMFIAGLVQTGLYVDFF 200          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig950.17528.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRR1_ECTSI2.360e-3237.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LJM2_ECTSI3.490e-3035.78PGPS/D6 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJM2... [more]
A0A6V1VUP9_HETAK6.730e-2734.56Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835Z6E1_9STRA6.800e-2633.64ER lumen protein retaining receptor-domain-contain... [more]
A0A7S3ZPQ8_9STRA4.880e-2533.18Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
F0YI66_AURAN7.170e-2531.75Uncharacterized protein n=2 Tax=Aureococcus anopha... [more]
ERD2A_ARATH1.720e-2434.12ER lumen protein-retaining receptor A n=29 Tax=Bra... [more]
A0A6J0KGP7_RAPSA4.670e-2433.95ER lumen protein-retaining receptor n=5 Tax=Brassi... [more]
A0A067CH71_SAPPC4.900e-2433.94Uncharacterized protein n=4 Tax=Saprolegniaceae Ta... [more]
W4G348_9STRA9.520e-2433.18Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000133ER lumen protein retaining receptorPFAMPF00810ER_lumen_receptcoord: 28..193
e-value: 4.6E-25
score: 89.2
IPR000133ER lumen protein retaining receptorPANTHERPTHR10585ER LUMEN PROTEIN RETAINING RECEPTORcoord: 5..224
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 205..223
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 107..124
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 174..193
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 62..66
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 163..173
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 125..143
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 24..38
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 224..333
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..61
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 194..204
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 144..162
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 87..106
NoneNo IPR availableTMHMMTMhelixcoord: 68..87
NoneNo IPR availableTMHMMTMhelixcoord: 173..195
NoneNo IPR availableTMHMMTMhelixcoord: 141..163
NoneNo IPR availableTMHMMTMhelixcoord: 107..124
NoneNo IPR availableTMHMMTMhelixcoord: 39..61
NoneNo IPR availableTMHMMTMhelixcoord: 2..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig950contigS-dermatodea_contig950:1663..21069 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig950.17528.1mRNA_S-dermatodea_contig950.17528.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig950 1451..22455 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig950.17528.1 ID=prot_S-dermatodea_contig950.17528.1|Name=mRNA_S-dermatodea_contig950.17528.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=334bp
MFILPLVANVFHLAAVFLLPFKLHMSRSAAGVSLKTQELYLVVFLVRLVL
VINHGGFLWLFRGLETTYISLTGATKLLLTTVTIAMMRGRPSPKASYDAS
MDSFRHWRYVALPCFVFSILASGWDTIKNDEGYVIMPANPFNICWFFTLV
LEPLAIVPQLLLFRRCTEVGRLPWVYFSLLASYRGMLLIYWIWSAQFARV
HLERPSTLLRVLLEAALYVAFFVDRVARNHSQHLPPDEIHIMVPNSSYNS
SARESLLNKEEPCPSDSALSDGSSAVQTREDGMRRLGRLGKDGVPSSAGR
GVGAAVAASAADHDVDVVGCARDSAEGGGGQPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000133ER_ret_rcpt