mRNA_S-dermatodea_contig9492.17521.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9492.17521.1 vs. uniprot
Match: D7FVG0_ECTSI (Centaurin, beta 5, isoform CRA_a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVG0_ECTSI) HSP 1 Score: 128 bits (322), Expect = 6.400e-33 Identity = 60/78 (76.92%), Postives = 67/78 (85.90%), Query Frame = 1
Query: 1 LSKPQFNKLIQANPVCVDCDAKDPDWASINLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTGPLLDLLEKAGNARAN 234
L+K Q L +ANP CVDC A++PDW+SINLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWT PL++LL KAGN AN
Sbjct: 432 LNKAQLTSLWEANPECVDCGAREPDWSSINLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTTPLVELLLKAGNHNAN 509
BLAST of mRNA_S-dermatodea_contig9492.17521.1 vs. uniprot
Match: A0A6H5L2J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2J8_9PHAE) HSP 1 Score: 122 bits (307), Expect = 8.660e-31 Identity = 59/81 (72.84%), Postives = 67/81 (82.72%), Query Frame = 1
Query: 1 LSKPQFNKLIQA---NPVCVDCDAKDPDWASINLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTGPLLDLLEKAGNARAN 234
L+K Q L +A NP CVDC A++PDW+SINLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWT PL++LL +AGN AN
Sbjct: 689 LNKAQLTSLWEASAANPECVDCGAREPDWSSINLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTTPLVELLREAGNHNAN 769
BLAST of mRNA_S-dermatodea_contig9492.17521.1 vs. uniprot
Match: A0A835ZCL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCL2_9STRA) HSP 1 Score: 107 bits (266), Expect = 3.000e-25 Identity = 51/74 (68.92%), Postives = 57/74 (77.03%), Query Frame = 1
Query: 16 FNKLIQANPVCVDCDAKDPDWASINLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTGPLL-DLLEKAGNARAN 234
+L +ANP CVDC A PDWASI+LGV+MCIECSGIHRSMGVH+SKVRSL LDRWT LL L+E GN N
Sbjct: 927 LTRLSKANPQCVDCGAATPDWASISLGVLMCIECSGIHRSMGVHISKVRSLMLDRWTPSLLLQLMESVGNTTFN 1000
BLAST of mRNA_S-dermatodea_contig9492.17521.1 vs. uniprot
Match: A0A452GME1_9SAUR (Arf-GAP domain-containing protein n=2 Tax=Archelosauria TaxID=1329799 RepID=A0A452GME1_9SAUR) HSP 1 Score: 97.4 bits (241), Expect = 1.190e-24 Identity = 43/74 (58.11%), Postives = 55/74 (74.32%), Query Frame = 1
Query: 13 QFNKLIQANPVCVDCDAKDPDWASINLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTGPLLDLLEKAGNARAN 234
Q + + N CVDCDA +PDWAS+NLG +MCIECSGIHR++G H+S+VRSL LD W G L+ ++ GNA AN
Sbjct: 15 QTVRTARGNSFCVDCDAPNPDWASLNLGSLMCIECSGIHRNLGTHLSRVRSLDLDDWPGELILVMTAIGNALAN 88
BLAST of mRNA_S-dermatodea_contig9492.17521.1 vs. uniprot
Match: A0A2P4T4I8_BAMTH (Uncharacterized protein n=2 Tax=Neognathae TaxID=8825 RepID=A0A2P4T4I8_BAMTH) HSP 1 Score: 101 bits (251), Expect = 2.000e-24 Identity = 45/74 (60.81%), Postives = 55/74 (74.32%), Query Frame = 1
Query: 13 QFNKLIQANPVCVDCDAKDPDWASINLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTGPLLDLLEKAGNARAN 234
Q + + N CVDCDA +PDWAS+NLG +MCIECSGIHR++G H+S+VRSL LD W G LL L+ GNA AN
Sbjct: 180 QAVRTARGNSFCVDCDAPNPDWASLNLGALMCIECSGIHRNLGTHLSRVRSLDLDDWPGELLTLMAAIGNALAN 253
BLAST of mRNA_S-dermatodea_contig9492.17521.1 vs. uniprot
Match: A0A2D4GPP7_MICCO (Arf-GAP domain-containing protein (Fragment) n=1 Tax=Micrurus corallinus TaxID=54390 RepID=A0A2D4GPP7_MICCO) HSP 1 Score: 96.3 bits (238), Expect = 2.800e-24 Identity = 42/74 (56.76%), Postives = 54/74 (72.97%), Query Frame = 1
Query: 13 QFNKLIQANPVCVDCDAKDPDWASINLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTGPLLDLLEKAGNARAN 234
Q + ++ N CVDCDA +PDWAS+NLG +MCIECSGIHR +G H+S+VRSL LD W L+ ++ GNA AN
Sbjct: 4 QSIRTVRGNGFCVDCDATNPDWASLNLGALMCIECSGIHRHLGTHLSRVRSLDLDDWPPELVTVMTAIGNALAN 77
BLAST of mRNA_S-dermatodea_contig9492.17521.1 vs. uniprot
Match: W7T4W5_9STRA (Ankyrin repeat-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4W5_9STRA) HSP 1 Score: 102 bits (253), Expect = 3.280e-24 Identity = 44/71 (61.97%), Postives = 55/71 (77.46%), Query Frame = 1
Query: 22 KLIQANPVCVDCDAKDPDWASINLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTGPLLDLLEKAGNARAN 234
++ +ANPVC DC +PDWAS++ G +MCIECSGIHRS+GVHVSKVRSL LD W L +++E GN RAN
Sbjct: 82 RVREANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAMGNLRAN 152
BLAST of mRNA_S-dermatodea_contig9492.17521.1 vs. uniprot
Match: A0A7S1Z229_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z229_TRICV) HSP 1 Score: 103 bits (257), Expect = 3.410e-24 Identity = 45/75 (60.00%), Postives = 57/75 (76.00%), Query Frame = 1
Query: 10 PQFNKLIQANPVCVDCDAKDPDWASINLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTGPLLDLLEKAGNARAN 234
P K++QANP C DC A DPDW S+NLGV++CI+CSG+HRS+GVHVSKVRS+ LD + P +LL GN +AN
Sbjct: 415 PAIRKILQANPTCADCGASDPDWVSLNLGVVICIDCSGVHRSLGVHVSKVRSVRLDDLSDPEANLLLALGNKKAN 489
BLAST of mRNA_S-dermatodea_contig9492.17521.1 vs. uniprot
Match: A7RZU7_NEMVE (Predicted protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7RZU7_NEMVE) HSP 1 Score: 103 bits (257), Expect = 4.860e-24 Identity = 43/71 (60.56%), Postives = 54/71 (76.06%), Query Frame = 1
Query: 22 KLIQANPVCVDCDAKDPDWASINLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTGPLLDLLEKAGNARAN 234
+ ++ N C DC A PDWASINLG+ +CIECSG+HRSMGVHVSKVRSLTLD+W G ++ +E GN + N
Sbjct: 516 RKVEGNKYCADCSAPRPDWASINLGITVCIECSGVHRSMGVHVSKVRSLTLDKWDGDTVEFMEAMGNTKVN 586
BLAST of mRNA_S-dermatodea_contig9492.17521.1 vs. uniprot
Match: A0A7S0VWC6_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VWC6_9CRYP) HSP 1 Score: 99.8 bits (247), Expect = 4.900e-24 Identity = 40/71 (56.34%), Postives = 56/71 (78.87%), Query Frame = 1
Query: 22 KLIQANPVCVDCDAKDPDWASINLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTGPLLDLLEKAGNARAN 234
+ ++ N C DC A+DP+WAS+NLGV++C+ECSGIHR++GVHVS+VRSL LD W L D++ + GNA+ N
Sbjct: 119 RAVEGNSECADCRARDPEWASVNLGVLICLECSGIHRALGVHVSRVRSLLLDSWEPSLSDVMRRLGNAKVN 189 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9492.17521.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9492.17521.1 >prot_S-dermatodea_contig9492.17521.1 ID=prot_S-dermatodea_contig9492.17521.1|Name=mRNA_S-dermatodea_contig9492.17521.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=78bp LSKPQFNKLIQANPVCVDCDAKDPDWASINLGVMMCIECSGIHRSMGVHVback to top mRNA from alignment at S-dermatodea_contig9492:1118..1907- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9492.17521.1 ID=mRNA_S-dermatodea_contig9492.17521.1|Name=mRNA_S-dermatodea_contig9492.17521.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=790bp|location=Sequence derived from alignment at S-dermatodea_contig9492:1118..1907- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9492:1118..1907- >mRNA_S-dermatodea_contig9492.17521.1 ID=mRNA_S-dermatodea_contig9492.17521.1|Name=mRNA_S-dermatodea_contig9492.17521.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=468bp|location=Sequence derived from alignment at S-dermatodea_contig9492:1118..1907- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |