mRNA_S-dermatodea_contig947.17502.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
|
Overview
Homology
BLAST of mRNA_S-dermatodea_contig947.17502.1 vs. uniprot
Match: D8LRS8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS8_ECTSI) HSP 1 Score: 633 bits (1632), Expect = 8.210e-220 Identity = 355/468 (75.85%), Postives = 386/468 (82.48%), Query Frame = 3
Query: 51 MGHRRVALLGLAVAVLLAVDGAAAASKGASRASSGRRSPPKAG-ASRPSRSQRDKEEDHDFRDHGATEDRARKGTRRXXXXXXXXXXXXXXXXXXXXXXXXXXXS-----RYEEDGDRTRRSRGRGMELVPSKRSPPKSSVLAGLAATVKGKATSLQEDAKGKVTEWRNIAKTTVWFSSKMEKFMIQMTWPDDGVLDDVWVKDTMNFLESAGNEPPRSPNNPNKRILRKLWLRMTEEDYRTKLKALQILHHTTMDLSPEAHVRVRNQFMKMRDETNHKNRNEVYFEPARVMDVSSSGIPFLPLLRSYSSFTFRRMTEVQGGPKQQLASTLRSKKTSHAEAVALLRRLDKLICVGMGCKVDRKTLNTITGQVIQLTARDMMALWRLYVKGLTRLIKGGYKDGSTAAPEAVAQLLSQYSKTLGNLDTYLTHFKRVVRDRRVFDNNQVDPAALEVCLASVAPAEDASAGVE 1436
MGHRR+ALLGLAV VL AVDGAAAASKGA RA S +R KA +SRPSR ++ D D R+ + +KGTR XXXXXXXX S RY+E G T R R RGMELVPS+RSPPKSS+L+GLAAT+KGKA S+QEDAKGKVTEWRNIAKTTVWFSSKMEKFMIQMTWPDDG LDD WVKDTMNFLESAGNEPPRSPNNPNKRILRKLWLRMTE DYRTKLKALQILHHTTMDLS EA+ RVRNQFMKMRDETNHKNRNEVYFEPAR+MDV+SSG+PFLPLLRSYSSFT RRMTEVQGGPKQ +ASTLRSKKTS EAVALLRRLDKLIC GMGCKVDRKTLNTITGQV+QLTARD+M LWRLYVKGLTRLIKGGYK+G T APEAV QLL+QY KT L+ YLTHFK++VRDRR+F++NQVDPAAL+VCLASV A+ A E
Sbjct: 1 MGHRRLALLGLAVVVLFAVDGAAAASKGAPRAGSQQRRSTKASRSSRPSR----RDIDEDEREFQGWDGETKKGTRXXXXXXXXXAARDDGSVGRRVRPSSTPGSSRSSSRYQESG--TSRRRSRGMELVPSRRSPPKSSMLSGLAATMKGKAASMQEDAKGKVTEWRNIAKTTVWFSSKMEKFMIQMTWPDDGALDDAWVKDTMNFLESAGNEPPRSPNNPNKRILRKLWLRMTEGDYRTKLKALQILHHTTMDLSSEANGRVRNQFMKMRDETNHKNRNEVYFEPARIMDVTSSGMPFLPLLRSYSSFTLRRMTEVQGGPKQ-IASTLRSKKTSQPEAVALLRRLDKLICTGMGCKVDRKTLNTITGQVMQLTARDLMTLWRLYVKGLTRLIKGGYKEGRTPAPEAVVQLLTQYGKTQQALERYLTHFKKIVRDRRLFEDNQVDPAALQVCLASVTQADGQGAEAE 461
BLAST of mRNA_S-dermatodea_contig947.17502.1 vs. uniprot
Match: A0A835YKQ2_9STRA (ANTH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKQ2_9STRA) HSP 1 Score: 239 bits (611), Expect = 2.610e-66 Identity = 154/399 (38.60%), Postives = 223/399 (55.89%), Query Frame = 3
Query: 402 GRGMELVPSKRS-----PPKSSVLAGLAATVKGKATSLQEDAKGKVTEWRNIAKTTVWFSSKMEKFMIQMTWPDDGVLDDVWVKDTMNFLESAGNEPPR-SPNNPNKRILRKLWLRMTEEDYRTKL----------------KALQILHHTTMDLSPEAHVRVRNQFMKMRDETNHKNRNEVYFEPARVMDVSSSGIPFLPLLRSYSSFTFRRMTEVQGGPKQQLASTLRSKKTSHAEAVALLRRLDKLICVGMGCK--------------------------------VDRKTLNT-ITGQVIQLTARDMMALWRLYVKGLTRLIKGGYKD-GSTAAPEAVAQLLSQYSKTLGNLDTYLTHFKRV--VRDRRVFDNNQVDPAALEVCLASVAPAEDAS 1424
G+G LVP++R P KSS+L+GLA++V KA+S+QE +KGK EWR I K V SS+ E+FM+Q+TWPDD +D V+ D M++L++A + P +P NP +R LRKLW RM+E+D K+L ++HH +DL P+A +R R ++MR E N K NE+YF+ R+MDV++ G PF+P +++Y+S+ F+R T GG K ++ TL++KKT AV LL+ +D ++ G+ VDRK L T +T +Q TA DM+ LWR+Y G+ RL +GG+ G A + +LLS Y+ T + YL K++ VRD F++NQV AALE CLA P AS
Sbjct: 92 GKGA-LVPARRGKGRGPPAKSSLLSGLASSVLEKASSMQEASKGKAMEWRKIVKGKV--SSQFERFMLQLTWPDDVPVDPVFTTDMMHYLDTADDYPDEMAPTNPYRRTLRKLWARMSEKDXXXXXXXXXXXXXXXXXXXXXKSLMLVHHMGIDLGPDASMRARTHILRMRKEVNSKKGNEMYFQLQRIMDVNAVGEPFVPFIKAYASYAFKRATMFVGGLKV-VSQTLKAKKTQEGTAVELLQTIDAMLNQGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRKELVTDLTRAALQYTAGDMLELWRVYAAGVQRLAEGGFAGAGGKGAKDGKQRLLSGYASTRSAVSAYLDQCKKMKLVRDLSKFEDNQVSDAALEQCLAPAEPERPAS 486
BLAST of mRNA_S-dermatodea_contig947.17502.1 vs. uniprot
Match: D7G759_ECTSI (Weakly similar Glutamic acid-rich protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G759_ECTSI) HSP 1 Score: 78.6 bits (192), Expect = 2.710e-11 Identity = 83/333 (24.92%), Postives = 147/333 (44.14%), Query Frame = 3
Query: 462 GLAATVKGKATSLQEDAKGKVTEWRNIAKTTVWFSSKMEKFMIQMTWPDDGVLDDVWVKDTMNFLESAGNEPPRSPNNPNKRIL-RKLWLRMTEEDYRTKLKALQILHHTTMDLSPEAHVRVRNQFMKMRDETNHKNRNEVYFEPARVMDVSSSGIPFLPLLRSYSSFTFRRMTEVQGGPKQQLASTLRSKKTSHAEAVALLRRLDKLICVGMGCKVDRKTLNTITGQVIQLTARDMMALWRLYVKGLTRLIK----GGYKDGSTAA--PEAVAQLLSQYSKTLGNLDTYLTHFKRVVRDRRVFDNNQVDPAALEVCLASVAPAEDASAGVEE 1439
G AA G+A SL K+ + + W E ++++TWPDD D+ V ++ +++ + + N+ R+L RKLW +M+E D+RT KA+ + H DL E H ++ KM E + K YF+ + VS G F + Y ++ F+R E Q+L + R + + V L + K I +G+ C+ + +T ++ TA D+ LWR + L +++ G DG+ +A E + Y ++ T+L + ++ + + PAA S + D+++ VEE
Sbjct: 230 GTAAEAVGQAGSLAASTSQKLKREVKLVVSGSW-----ESALLKVTWPDDLPPDETLVLSMVDAVKTFKKDRDVTKNSAEHRVLLRKLWAKMSEPDWRTVSKAVYLFHSILRDLPVEHHAILKIFLAKMSREWDKKTACR-YFDLDVLCRVSEEGEAFRSFVDRYGTYVFKR-AEGFNARFQELDTMQREEGWENV--VTTLAKAQKAIDLGVSCQPQPEEETELTVLCLRNTALDLHQLWRRFHSSLDWVLEEAEDGDLFDGADSAMVEECLNDFKGFYMTRYDDVLTFLLDAEELLGIYGLHVPDLSLPAAHGFDTPSTQTSTDSNSAVEE 553
BLAST of mRNA_S-dermatodea_contig947.17502.1 vs. uniprot
Match: A0A835ZEZ8_9STRA (ENTH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEZ8_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 3.160e-9 Identity = 64/260 (24.62%), Postives = 114/260 (43.85%), Query Frame = 3
Query: 546 KTTVWFSSKMEKFMIQMTWPDDGVLDDVWVKDTMNFLESAGNEPPRSPNNPNKRI-LRKLWLRMTEEDYRTKLKALQILHHTTMDLSPEAHVRVRNQFMKMRDETNHKNRNEV--------YFE----PARVMDVSSSGIPFLPLLRSYSSFTFRRMTEVQGGPKQQLASTLRSKKTSHAEAVALLRRLDKLICVGMGCKVDRKTLNTITGQVIQLTARDMMALWRLYVKGLTRLIKGGYKDG--STAAPEAVAQLLSQY 1280
K ++ S E +++ TWPDD D V + + S + + + R+ LRKLW +M E D+RTK+K+ ILH +L P ++ K+R E + + V YF+ A V + F +RSY ++ RR + GG ++L +S+ +++L + K + M C++ + +T +QL D L+RL+ L + + A P+AV ++L+ +
Sbjct: 202 KVKMFTSGTWETALLKATWPDDAPPDAALVGQIVYGVRSFRPDMDVTKQSAEHRVFLRKLWAKMREPDWRTKVKSCYILHRVLRELPPRDDAVLKKHMGKLRRERSKRPAGAVGGGGDRPRYFDLAAAVAEVGPAPADARTFGGFVRSYVTYVLRRSQQF-GGKFEELQGV--GPGSSYEHVISVLVKARKALEAAMACQISADQESEVTLLALQLVCMDAAKLFRLFHAALGWALTEAESGDLFAEADPQAVKEVLADF 458
BLAST of mRNA_S-dermatodea_contig947.17502.1 vs. uniprot
Match: A0A7S1UKU7_9STRA (Hypothetical protein n=3 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UKU7_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 4.180e-9 Identity = 65/270 (24.07%), Postives = 115/270 (42.59%), Query Frame = 3
Query: 564 SSKMEKFMIQMTWPDDGVLDDVWVKDTMNFLESAGNEPPRSPNNPNKRILRKLWLRMTEEDYRTKLKALQILHHTTMDLSPEAHVRVRNQFMKMRDETNHKNRNEVYFEPARVMDVSSS--GIPFLPLLRSYSSFTFRR-------MTEVQGGPKQQLASTLRSKK--TSHAEAVALLRRLDKLICVGMGCKVDRKTLNTITGQVIQLTARDMMALWRLYVKGLTRLIKGGYKDGSTA----------APEAVAQLLSQYSKTLGNLDTY 1310
SS++E+ M++ T PDD + V+ + +LRKLW + E+D+RTK+KAL ILH + D +PE + + ++R ++ K + + YF +++ V ++ F + Y+ + R E+ P+ S+ R K TS + L ++ G+ C++ + T ++ A D++AL L R +KG DGS + E + + L+ KT LD Y
Sbjct: 228 SSELEQVMLKATRPDDTPVKGKHVERLVGVTYQVSARYDLYTG-----VLRKLWAKTAEKDWRTKVKALYILHRYSSDGAPEHKDALIKRLRELRRTSDPKRKGKKYFNKQQLLAVENTPENEAFRGFVGRYAHYVLARTQSFGGMFVEIGEAPRPPPKSSNRPPKPLTSTSLKQEHLVNAKMVLTAGLACQLKDDEVTENTAIAVERVASDLIALSSAVAMALNRALKGNSSDGSDPVLLKKWCEFYSEELLPRTLTMVKKTSPKLDPY 492
BLAST of mRNA_S-dermatodea_contig947.17502.1 vs. uniprot
Match: A0A7S4VB79_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VB79_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 1.800e-8 Identity = 86/351 (24.50%), Postives = 137/351 (39.03%), Query Frame = 3
Query: 378 GDRTRRSRGRGMELVPSKRSPPKSSVLAGLAA---------TVKGKATSLQEDAKGKVTE-----WRNIAKTTVWFSSKMEKFMIQMTWPDDGVLDDVWVKDTMNFLESAGNEPPRSPNNPNKRILRKLWLRMTEEDYRTKLKALQILHHTTMDLSPEAHVRVRNQFMKMRDETNHKNRNEVYFEPARVM--DVSSSGIPFLPLLRSYSSFTFRR-------MTEVQGGP------KQQLASTLRSKKTSHAEAVALLRRLDKLICVGMGCKVDRKTLNTITGQVIQLTARDMMALWRLYVKGLTRLIKGGYKDGSTA-----------APEAVAQLLSQYSKTLGNLDTY 1310
G +R RGRG +VP S+ GL+A TV+ ATS K K T+ +R I T SS++E+ M++ T PDD + V+ + +LRKLW +M E+D+RT +KAL ILH + D P+ ++ + ++R T R E YF +++ D + PF + Y+ + R TE++ P K+ A+ + TS + L L+ G C + T ++ A D++ L L R ++G G + E + + KT LD Y
Sbjct: 213 GPPSRGGRGRGSNVVPYVGKEQPSTFTRGLSAIRDSIPDVATVRDAATSSITAVKDKSTKISSGIYREIKGLT---SSELEQVMLKATRPDDQPVKGKHVERLVGVTYQISGRYDIYDA-----VLRKLWNKMAEKDWRTTIKALYILHRFSSDGGPDHQAALKARLRELR-RTRDPKRKEKYFNSKQLLEGDATPENQPFRAFMARYAHYVLLRAQCFGGMFTEIKENPSAPPSSKKPSAAAAQKPITSTSLRPEHLEASQLLLKAGCACALKDGEECESTALALERVASDLIGLNTAVAIALNRALRGRESKGPVDQALIKRWCEFYSEELLPKTKKMVKKTSAKLDAY 554
BLAST of mRNA_S-dermatodea_contig947.17502.1 vs. uniprot
Match: A0A7S2EXR9_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EXR9_TRICV) HSP 1 Score: 67.0 bits (162), Expect = 6.320e-8 Identity = 62/255 (24.31%), Postives = 106/255 (41.57%), Query Frame = 3
Query: 564 SSKMEKFMIQMTWPDDGVLDDVWVKDTMNFLESAGNEPPRSPNNPNKRILRKLWLRMTEEDYRTKLKALQILHHTTMDLSPEAHVRVRNQFMKMRDETNHKNRNEVYFEPARVM--DVSSSGIPFLPLLRSYSSFTFRR-------MTEVQGGPKQQLASTLRSKKTSHAEAVALLRRLDK---LICVGMGCKVDRKTLNTITGQVIQLTARDMMALWRLYVKGLTRLIKGGYKDGSTAAPEAVAQLLSQYSKTL 1292
SS++E+ M++ T PDD + V+ + +LRK+W +MTE+D+RTK+KAL +LH + D +P+ ++ + ++R T R E YF +++ D S + + + Y+ + R E+ P S+ RS A LD ++ G C + T ++ A D++ L GL R +KG +G A P + + YS L
Sbjct: 104 SSELEQVMLKATKPDDTPVKGKHVERLVGVTYQISGRYDIYDA-----VLRKVWAKMTEKDWRTKVKALYVLHRFSSDGAPDHQAALKARLRELR-RTRDPKRKEKYFNSKQLLAGDASPDNVKYRAFMARYAHYVLLRAQCFGGMFNEIGQEPPTSSKSSSRSSAKPITSAALRPEHLDAAQMILKAGTACALKDGEECENTCFCVERVASDLIGLTGAVASGLNRALKGKGAEG--ADPAVIKRWCEFYSDEL 350
BLAST of mRNA_S-dermatodea_contig947.17502.1 vs. uniprot
Match: A0A1Z5K193_FISSO (ENTH domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K193_FISSO) HSP 1 Score: 65.9 bits (159), Expect = 1.980e-7 Identity = 65/252 (25.79%), Postives = 110/252 (43.65%), Query Frame = 3
Query: 564 SSKMEKFMIQMTWPDDGVLDDVWVKDTMNFLESAGNEPPRSPNNPNKRILRKLWLRMTEEDYRTKLKALQILHHTTMDLSPEAHVRVRNQFMKMRDETNHKNRNEVYFEPARVM--DVSSSGIPFLPLLRSYSSFTFRRMTEVQGGPKQQLASTLRSKK-------TSHAEAVALLRRLDKLICVGMGCKVDRKTLNTITGQVIQLTARDMMALWRLYVKGLTRLIKGGYKDGSTAAPEAVAQLLSQYSKTL 1292
SS++E+ M++ T PDD + V+ + G P + +LRKLW +M E D+RT +KA+ I+H + D +PE ++ + ++R T R + +F +++ D + + F L YS + R T+ GG ++A +S K TS V L L+ G+ C++ T ++ DM+ L L R +K G A P + + + YSK L
Sbjct: 226 SSELEQVMLKATKPDDTPVKGKHVERLVGVTYQIG--PKFDIYDA---VLRKLWGKMVERDWRTTMKAVYIMHRFSADGAPEHAAALKARLRELR-RTRDPKRKDKFFNTKQLLAGDTTPENVKFRAFLSRYSHYVLLR-TQCYGGMFDEIAVLPKSDKKKAPKPITSTCLRVEQLESAAVLLKAGLACQLKDGEECENTALAVERVVADMIGLCSAVAVALNRALKDDDLKG--ADPAILKKWCAFYSKEL 468
BLAST of mRNA_S-dermatodea_contig947.17502.1 vs. uniprot
Match: A0A7S2V420_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V420_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 3.740e-7 Identity = 58/218 (26.61%), Postives = 102/218 (46.79%), Query Frame = 3
Query: 558 WFSSKMEKFMIQMTWPDDGVLD----DVWVKDTMNFLESAGNEPPRSPNNPNKRILRKLWLRMTEEDYRTKLKALQILHHTTMDLSPEAHVRVRNQFMKM-RDETNHKNRNEVYFEPARVMDVSSSGIPFLPLLRSYSSFTFRRMTEVQGGPKQQLASTLRSKKTSHAEAV--ALLRRLDKLICVGMGCKVDRKTLNTITGQVIQLTARDMMALWRLY 1190
+F+ + + ++T PDD D + V T F++ NE S +NP + IL +W R+ EED+RT +K L +LH D++PE + F KM R+E +H +YF V+ +++ G + +RSY + +R Q L + H E + A+L+ + + + C R+ ++ ++L A D+ LW L+
Sbjct: 249 YFARDINAAIYKVTRPDDYRPDLRTVESIVSQTQQFVQ---NEDVTSNSNPFRLILTSIWERVMEEDWRTTIKGLALLHKLLRDVNPENALCFNKLFNKMSREECDHA--GHMYFSLPPVVRLNAEGQAWSRFMRSYFRYVRKRAKTFTS---QFAELELLGFEEMHPEEIIFAVLKARKNVEAI-LACAFPREEYAEVSMWCLELLAEDLHHLWHLF 457
BLAST of mRNA_S-dermatodea_contig947.17502.1 vs. uniprot
Match: A0A7S4NIW1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NIW1_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 2.440e-6 Identity = 60/229 (26.20%), Postives = 94/229 (41.05%), Query Frame = 3
Query: 708 ILRKLWLRMTEEDYRTKLKALQILHHTTMDLSPEAHVRVRNQFMKMRDETNHKNRNEVYFEPARVM--DVSSSGIPFLPLLRSYSSFTFRR-------MTEVQGGPKQQLASTL--------RSKKTSHAEAVALLRRLDKLICVGMGCKVDRKTLNTITGQVIQLTARDMMALWRLYVKGLTRLIKG-GYKDGSTAAPEAVAQLLSQYSKTLGNLDTYLTHFKRVVRD 1340
+LRKLW +MTE+D+RTK KAL ILH + D +P+ ++ + ++R T R E YF +++ D S + L Y+ + R +E+ P + R TS A L ++ G C + T ++ A D++ L L R +K G DGS P VAQ YS D L +R++++
Sbjct: 270 VLRKLWAKMTEKDWRTKTKALYILHRFSSDGAPDHQAALKARLRELR-RTRDPKRKEKYFNSKQLLGGDASVESAKYRAFLARYAHYVLLRAQCFGGMFSEISEDPSKSXXXXXXXXXXXXXRKPATSAALRPEHLEAAQMILKSGCACVLKDGEACENTASCVERVAADLVGLVGAVAAALNRSLKNDGPNDGSD--PAVVAQWCEFYS------DELLPRARRMIKE 489 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig947.17502.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig947.17502.1 >prot_S-dermatodea_contig947.17502.1 ID=prot_S-dermatodea_contig947.17502.1|Name=mRNA_S-dermatodea_contig947.17502.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=482bp MGHRRVALLGLAVAVLLAVDGAAAASKGASRASSGRRSPPKAGASRPSRSback to top mRNA from alignment at S-dermatodea_contig947:11337..16798+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig947.17502.1 ID=mRNA_S-dermatodea_contig947.17502.1|Name=mRNA_S-dermatodea_contig947.17502.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5462bp|location=Sequence derived from alignment at S-dermatodea_contig947:11337..16798+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig947:11337..16798+ >mRNA_S-dermatodea_contig947.17502.1 ID=mRNA_S-dermatodea_contig947.17502.1|Name=mRNA_S-dermatodea_contig947.17502.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2892bp|location=Sequence derived from alignment at S-dermatodea_contig947:11337..16798+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |