prot_S-dermatodea_contig1286.1749.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1286.1749.1
Unique Nameprot_S-dermatodea_contig1286.1749.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length547
Homology
BLAST of mRNA_S-dermatodea_contig1286.1749.1 vs. uniprot
Match: A0A6H5K0I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0I6_9PHAE)

HSP 1 Score: 342 bits (878), Expect = 5.430e-101
Identity = 260/598 (43.48%), Postives = 319/598 (53.34%), Query Frame = 0
Query:   12 ACWRAESLASSRLRARALSRISAATNARIREAFTRWRQRSRAGHVADSAVTALKRVSERRRSDRAGMRLAFQSWKREAFGGEGGGDRSKGVQGADWESETEQQLESLAGVSVEAAAAFSAAVSISQVFEVVEALVSMAAPLSRGRLYLLSGEPGE-LFCQESDRTANPEREPVEVSFPVGNGLVGRCVATGLPFQA------STGSDCAPYLASHRRCNSNNNKITLNGPADLHGL-----FPPQQQGWTSGASSAAFRRPRIYGAGKRNFAA----PDSASTAPPPPASWGHS---TPVAAAAIGAGAARRSPVAGGVRHRPRLAFFPA--DSDDSRSPSSARLSPRSPTKMWFGGSKSPSPRPLGGGRGGVAVGGEGSVRED----------------------------------EVWRAACVPVVGGGGDGGHPMMGVVKA-------WKPQQSEGDGGDQPPISPSFTAGEMAALGVVAGQAAAALRRLDVQMADQEGGAQVRSCPIRHARGGIEQRDAAVKAEIARLRETMQQLSGSAQGLAKQRDDARAALARVKGTLRRMGPALRDVRDRQLGFRHYHDLIVTLSRSVLQ 547
            A WR E+ ASSRLR+RALSRIS A    + EAF+ WR+ SR  H    A+TAL R S+RRRSDRA MRLA ++W R A GG+G G   +   G       E  LE++AGV VEAAAAFS A SI +VF +VE  VS  A  SRGRL LL+GEPG  +FC ESDR A P+++P+E SFP+GNGLV RCVATGL FQ       STG    P  +      S    + L GPADLH L     + P+     +  + A  +   +   G +  A     PDSAST  PPPASW H    +P  +  +G G + R P         RLAFFPA  D + SRSP                                                                              ++   AC+PV  G  DGG  MMGV+KA       W+ QQ  GD G +PP    F+ GEMAAL VVAGQAAAALRR+    +++E   Q             ++R+ AVK E+  LRE M+ LSGSA+GLA+QRD+ARAALAR KGTLRRM PALR+ RDRQLGFRHYHDLIV +S++VLQ
Sbjct:  649 ARWRGEARASSRLRSRALSRISQAAQGLVSEAFSTWREGSRIAHGKAKALTALARASDRRRSDRAEMRLALRTWTRNACGGDGDGGGRRSGDGEPRGGGMEDGLEAVAGVFVEAAAAFSTASSIPEVFTLVEDFVSEVAISSRGRLLLLNGEPGGGMFCLESDRRAPPDQDPLEASFPIGNGLVARCVATGLAFQTRRGGNGSTGGASPPRSSRRLYSTSGALDVALAGPADLHALPLQERYDPESPSHRAAENGAHAQPLSMSFQGWKKKAVTGPIPDSASTLLPPPASWNHRRSRSPDGSPVLGVGGSGRGPS--------RLAFFPASDDCESSRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLLFVACLPVACG--DGGQAMMGVLKASESWLLAWREQQHRGDEGHRPPDK-GFSGGEMAALAVVAGQAAAALRRVGAAASEREEVLQELDAXXADRVDETQKREEAVKEEMKHLREAMEHLSGSAKGLARQRDEARAALARAKGTLRRMVPALREARDRQLGFRHYHDLIVNMSKNVLQ 1235          
BLAST of mRNA_S-dermatodea_contig1286.1749.1 vs. uniprot
Match: D7FQ01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ01_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 1.030e-68
Identity = 194/507 (38.26%), Postives = 242/507 (47.73%), Query Frame = 0
Query:   48 RQRSRAGHVADSAVTALKRVSERRRSDRAGMRLAFQSWKREAFGGEGGGDRSKGVQGADWESETEQQLESLAGVSVEAAAAFSAAVSISQVFEVVEALVSMAAPLSRGRLYLLSGEPGE-LFCQESDRTANPEREPVEVSFPVGNGLVGRCVATGLPFQA------STGSDCAPYLASHRRCNSNNNKITLNGPADLHGLFPPQQQGWTSGASSAAFRRPRIYGAGKRNFAAPDSASTAPPPPASWGHSTPVAAAAIGAGAARRSPVAGGVRHRPRLAFFPADSDDSRSPSSARLSPRSPTKMWFGGSKSPSPRPLGGGRGGVAVGGEGSVREDEVWRAACVPVVGGGGDGGHPMMGVVKAWKPQQSEGDGGDQPPISPSFTAGEMAALGVVAGQAAAALRRLDVQMADQEGGAQVRSCPIRHARGGIEQRDAAVKAEIARLRETMQQLSGSAQGLAKQRDDARAALARVKGTLRRMGPALRDVRDRQLGFRHYHDLIVTLSRSVLQ 547
            R+ SR  H    A+TAL R S+RR+SDRA MRLA ++W+R A GG+G G   +              LE++AG  VEAAAAFS A SI +VF +VE  VS  A  SRGRL LL+GEPG  +FC ESDR A P+++P+E SFP+GNGLV RCVATGL FQ       STG    P  +      S    + L GPADLH L PPQ++G+                                                   G   +SP                              P      W+  S                                                    AW+ QQ  GD G +PP    F+  EMAAL VVAGQAAAALRR+    +++E   +             ++R+ AVK E+  LRE M+ +SGSA+GLA+QRD+ARAALAR KGTLRRM PALR+ RDRQLGFRHYHDLIV +S++VLQ
Sbjct:  328 REGSRQAHGKAKALTALARASDRRQSDRAEMRLALRTWRRNACGGDGDGGGGRXXXXEPRGGGMADGLEAMAGAFVEAAAAFSTASSIPEVFTLVEDFVSEVAVSSRGRLLLLNGEPGGGMFCLESDRRAPPDQDPLEASFPIGNGLVARCVATGLAFQTRRGGNGSTGGASPPRSSRRLYSTSGALDVALAGPADLHAL-PPQERGY---------------------------------------------------GFVSKSP------------------------------PXXXXXRWWSESXXXXXXXXXX----------------------------------XXXXXXXXAWREQQHRGDEGHRPPDK-GFSGREMAALAVVAGQAAAALRRVGAAASEREEVLEELDAXXADRVDETQKREEAVKEEMKHLREAMEHVSGSAKGLARQRDEARAALARAKGTLRRMVPALREARDRQLGFRHYHDLIVNMSKNVLQ 717          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1286.1749.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K0I6_9PHAE5.430e-10143.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQ01_ECTSI1.030e-6838.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 479..499
NoneNo IPR availableSUPERFAMILY55781GAF domain-likecoord: 123..444

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1286contigS-dermatodea_contig1286:17362..21748 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1286.1749.1mRNA_S-dermatodea_contig1286.1749.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1286 17362..21748 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1286.1749.1 ID=prot_S-dermatodea_contig1286.1749.1|Name=mRNA_S-dermatodea_contig1286.1749.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=547bp
RSKRRLLRDTLACWRAESLASSRLRARALSRISAATNARIREAFTRWRQR
SRAGHVADSAVTALKRVSERRRSDRAGMRLAFQSWKREAFGGEGGGDRSK
GVQGADWESETEQQLESLAGVSVEAAAAFSAAVSISQVFEVVEALVSMAA
PLSRGRLYLLSGEPGELFCQESDRTANPEREPVEVSFPVGNGLVGRCVAT
GLPFQASTGSDCAPYLASHRRCNSNNNKITLNGPADLHGLFPPQQQGWTS
GASSAAFRRPRIYGAGKRNFAAPDSASTAPPPPASWGHSTPVAAAAIGAG
AARRSPVAGGVRHRPRLAFFPADSDDSRSPSSARLSPRSPTKMWFGGSKS
PSPRPLGGGRGGVAVGGEGSVREDEVWRAACVPVVGGGGDGGHPMMGVVK
AWKPQQSEGDGGDQPPISPSFTAGEMAALGVVAGQAAAALRRLDVQMADQ
EGGAQVRSCPIRHARGGIEQRDAAVKAEIARLRETMQQLSGSAQGLAKQR
DDARAALARVKGTLRRMGPALRDVRDRQLGFRHYHDLIVTLSRSVLQ
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