prot_S-dermatodea_contig9420.17451.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9420.17451.1
Unique Nameprot_S-dermatodea_contig9420.17451.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length384
Homology
BLAST of mRNA_S-dermatodea_contig9420.17451.1 vs. uniprot
Match: A0A6H5JRJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ2_9PHAE)

HSP 1 Score: 259 bits (663), Expect = 4.500e-79
Identity = 208/480 (43.33%), Postives = 241/480 (50.21%), Query Frame = 0
Query:    1 MGCSSSKRGCC-GENRPEELGKCASFSPDVRWSWLRGRTLFTFSELRALLKVFFAAXXXXXXXXXXXXXXXXXXXXXXXXXXPSAPVSCTHEARAGSSALWPIVGGAGGGAKGQGAAAAATMDKSQFLAVCESAEAIRVS--VGAFGARLFDVLDEDGDGLIDFEDFAQGLSKLLKGPESEKLKLMYAAYDLSGVVPSEERSTSSSGRKGSGTGGGFGGG----------KPKMFRRSKYLTVEDITTVLASASQGA-YPTLLQFTAEGGND---NHLSGGGSRSGSPDRSTH----------------------------------------------------------------GESKKAD--RPGSRGRPTSGGGEAK------------RSPSH--DARAARDPEALAEVLQELARRNAASYAARAVSEFGQVQDGA-LTQKEFERWALTAPVLRCRINEFSIDVNVAPFQGVRL 382
            MGC +SK+    GE R EEL KCA+ S +VRW WLR R LF+F+ELR+L K F AA                          P APV C+ EA  G           GGGA   G A  + M K+QFL++CES++A R+S  VGAFG+RLFDVLD +G G +DFE    GLSKLLKGPE E+LKL+Y+AYDLSGV PSEE                              K K  RRSKYLT+EDIT VLASASQ A YP LL FT +G       HLSGGG   G     T                                                                 G   K D  R    G+  + GG               RS      AR +RDPEALAE+L+E+A+RNA  YAA AVSEFGQ Q GA LTQKEFERWALT PVLRCRINEFSID+N+APF+GVRL
Sbjct:    1 MGCHASKQASLNGEIRSEELAKCAAVSGEVRWVWLRSRALFSFAELRSLFKQFQAALRASSQQQQQQSGELQYHDLLGAASQP-APV-CSVEATKG-----------GGGAPSCGGAPGSAMSKAQFLSLCESSDAFRLSEVVGAFGSRLFDVLDANGFGFLDFETLVLGLSKLLKGPERERLKLLYSAYDLSGVAPSEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAKPSRRSKYLTLEDITAVLASASQAAAYPALLSFTTDGKGGMTTGHLSGGGVIGGGXXXXTXXDGMFCCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNDRGWXXXXXXXXXXXXXXXXXXXXGLPSKEDSLRDSEEGKKEACGGRGXXXXXXXXXXXXGRSSRRGCSARVSRDPEALAELLREMAQRNAERYAAAAVSEFGQAQGGAGLTQKEFERWALTGPVLRCRINEFSIDLNLAPFRGVRL 467          
BLAST of mRNA_S-dermatodea_contig9420.17451.1 vs. uniprot
Match: D7FRP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRP0_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 9.200e-54
Identity = 135/282 (47.87%), Postives = 159/282 (56.38%), Query Frame = 0
Query:    1 MGCSSSKRGCC-GENRPEELGKCASFSPDVRWSWLRGRTLFTFSELRALLKVFFAAXXXXXXXXXXXXXXXXXXXXXXXXXXPSAPVSCTHEARAGSSALWPIVGGAGGGAKGQGAAAAATMDKSQFLAVCESAEAIRVS--VGAFGARLFDVLDEDGDGLIDFEDFAQGLSKLLKGPESEKLKLMYAAYDLSGVVPSEERSTSSSGRKGSGTGGGFG----------GGKPKMFRRSKYLTVEDITTVLASASQ-GAYPTLLQFTAEGGND---NHLSGGG 265
            MGC +SK+    GE R EEL KCA+ S +VRW WLR R+LF+F+ELR+L K F AA                           +APV C+ EA  G           GG A   G A  + M K+QFL++CES++A R+S  VGAFG+RLFDVLD  G G +DFE F  GLSKLLKGPE E+LKL+Y+AYDLSGV PSEE                             GK K  RRSKYLT+EDIT VLASASQ  AYP LL FT +G       HLSGGG
Sbjct:    1 MGCHASKQASLSGEIRSEELAKCAAVSGEVRWVWLRSRSLFSFAELRSLFKQFQAALRASSQQQQEQPGELQYHDLLGAASQ-AAPV-CSVEAIKG-----------GGRAPSYGGAPGSAMSKAQFLSLCESSDAFRLSEVVGAFGSRLFDVLDASGVGFLDFETFVLGLSKLLKGPEKERLKLLYSAYDLSGVAPSEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGKVKPSRRSKYLTLEDITAVLASASQTAAYPALLSFTTDGKGGMTTGHLSGGG 269          
BLAST of mRNA_S-dermatodea_contig9420.17451.1 vs. uniprot
Match: A0A6H5JF53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF53_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 4.190e-35
Identity = 124/303 (40.92%), Postives = 139/303 (45.87%), Query Frame = 0
Query:  175 PESEKLKLMYAAYDLSGVVPSEERSTSSSGRKGSGTGGGFGGG----------KPKMFRRSKYLTVEDITTVLASASQGA-YPTLLQFTAEGGND---NHLSGGGSRSGSPDRSTH----------------------------------------------------------------GESKKAD--RPGSRGRPTSGGGEAK------------RSPSH--DARAARDPEALAEVLQELARRNAASYAARAVSEFGQVQDGA-LTQKEFERWALTAPVLRCRINEFSIDVNVAPFQGVRL 382
            P  E+LKL+Y+AYDLSGV PSEE                              K K  RRSKYLT+EDIT VLASASQ A YP LL FT +G       HLSGGG   G     T                                                                 G   K D  R    G+  + GG               RS      AR +RDPEALAE+L+E+A+RNA  YAA AVSEFGQ Q GA LTQKEFERWALT PVLRCRINEFSID+N+APF+GVRL
Sbjct:    4 PNLERLKLLYSAYDLSGVAPSEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAKPSRRSKYLTLEDITAVLASASQAAAYPALLSFTTDGKGGMTTGHLSGGGVIGGGXXXXTXXDGMFCCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNDRGWXXXXXXXXXXXXXXXXXXXXGLPSKEDSLRDSEEGKKEACGGRGXXXXXXXXXXXXGRSSRRGCSARVSRDPEALAELLREMAQRNAERYAAAAVSEFGQAQGGAGLTQKEFERWALTGPVLRCRINEFSIDLNLAPFRGVRL 306          
BLAST of mRNA_S-dermatodea_contig9420.17451.1 vs. uniprot
Match: A0A7S4KNI0_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KNI0_9EUKA)

HSP 1 Score: 55.1 bits (131), Expect = 5.950e-5
Identity = 30/74 (40.54%), Postives = 42/74 (56.76%), Query Frame = 0
Query:  121 MDKSQFLAVCESAEAI---RVSVGAFGARLFDVLDEDGDGLIDFEDFAQGLSKLLKGPESEKLKLMYAAYDLSG 191
            +D+  F A  +S E      ++   F  RLFD+LD +GDG++D  +F  GLS + KG   EKL L + AYD  G
Sbjct:   90 VDRENFNAALQSLEKSGLKELNNSPFSDRLFDLLDSNGDGVVDLPEFITGLSMVCKGSVEEKLLLSFKAYDSDG 163          
BLAST of mRNA_S-dermatodea_contig9420.17451.1 vs. uniprot
Match: L8H9K0_ACACA (EF hand,SPla/RYanodine receptor (SPRY) domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H9K0_ACACA)

HSP 1 Score: 55.5 bits (132), Expect = 9.320e-5
Identity = 24/52 (46.15%), Postives = 35/52 (67.31%), Query Frame = 0
Query:  140 VGAFGARLFDVLDEDGDGLIDFEDFAQGLSKLLKGPESEKLKLMYAAYDLSG 191
            +G    RLF+VLD+DGDG +DFE+F  G+    +G   EKLK ++  YD++G
Sbjct:   62 LGPIFDRLFEVLDQDGDGSVDFEEFMSGMFIFGRGSREEKLKFLFKLYDING 113          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9420.17451.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JRJ2_9PHAE4.500e-7943.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRP0_ECTSI9.200e-5447.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF53_9PHAE4.190e-3540.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4KNI0_9EUKA5.950e-540.54Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
L8H9K0_ACACA9.320e-546.15EF hand,SPla/RYanodine receptor (SPRY) domain cont... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23055:SF160coord: 146..191
IPR028846Recoverin familyPANTHERPTHR23055CALCIUM BINDING PROTEINScoord: 146..191
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 152..164
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 146..174
score: 11.947
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 137..360

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9420contigS-dermatodea_contig9420:1763..5980 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9420.17451.1mRNA_S-dermatodea_contig9420.17451.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9420 1763..5980 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9420.17451.1 ID=prot_S-dermatodea_contig9420.17451.1|Name=mRNA_S-dermatodea_contig9420.17451.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=384bp
MGCSSSKRGCCGENRPEELGKCASFSPDVRWSWLRGRTLFTFSELRALLK
VFFAATASSSQGETTTLAAASTTAGDTTSSSPSAPVSCTHEARAGSSALW
PIVGGAGGGAKGQGAAAAATMDKSQFLAVCESAEAIRVSVGAFGARLFDV
LDEDGDGLIDFEDFAQGLSKLLKGPESEKLKLMYAAYDLSGVVPSEERST
SSSGRKGSGTGGGFGGGKPKMFRRSKYLTVEDITTVLASASQGAYPTLLQ
FTAEGGNDNHLSGGGSRSGSPDRSTHGESKKADRPGSRGRPTSGGGEAKR
SPSHDARAARDPEALAEVLQELARRNAASYAARAVSEFGQVQDGALTQKE
FERWALTAPVLRCRINEFSIDVNVAPFQGVRLA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028846Recoverin
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair