prot_S-dermatodea_contig9411.17445.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9411.17445.1
Unique Nameprot_S-dermatodea_contig9411.17445.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length295
Homology
BLAST of mRNA_S-dermatodea_contig9411.17445.1 vs. uniprot
Match: D8LBT7_ECTSI (RBEL1, Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBT7_ECTSI)

HSP 1 Score: 361 bits (926), Expect = 1.410e-112
Identity = 218/307 (71.01%), Postives = 232/307 (75.57%), Query Frame = 0
Query:    1 RRKLHGTGAQFNMKVVVRGERGVGKSTLLRRLQGLPYEEKYTPTPEIQTTTINNWAYRGSQDVVKVEVWDVVDKGLARGGVSRVPEGGDLEDAVSGLPLDRGSARGGRALAVLDAGVVNVYQGANAVIFMIDPYRPETLDKVEKSLAEAPVSLPAVVLLNFRDKLEEDAVAKASGKSRSPQXXXXXXXXXXXEKKPSTDPPTPLKDNGD--------GNVAAGDGSAIAKEGVAAQAG--EGGVGKEEA--GGGGVGADAWAHVATLETARAMMDRVREVDIAEGRGSGRRVSLFDCSMKNCFGLRV 295
            RRKLHGTGAQ+NMKVV+RGERGVGKSTL RRLQGLPYEEKYTPTPEIQTTTINNW YRGS+DVVKVEVWDVVDKGLA+GG  RVPEG DLED V+GLP D GS  GGR+LAVLDAGVVNVYQGA+A+IF++DPYRPETLDKVEK LAEAPV LP VVLLNFRDKLEEDAVAKAS KS +  XXXXXXXXXXX                          + A G  S       AA  G  EG      A  GGGG G  AW HV TLETAR MMDRV+E D A GRG+GRRVSLFDCSMKNCFGLRV
Sbjct:   54 RRKLHGTGAQYNMKVVIRGERGVGKSTLWRRLQGLPYEEKYTPTPEIQTTTINNWVYRGSRDVVKVEVWDVVDKGLAQGGKGRVPEGEDLEDVVAGLPPDHGSGGGGRSLAVLDAGVVNVYQGASAIIFVVDPYRPETLDKVEKGLAEAPVDLPTVVLLNFRDKLEEDAVAKASQKSGTSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTAVGPSSGTESVATAAAVGASEGFDSASSAVDGGGGKGG-AWDHVVTLETARLMMDRVKEADEAAGRGAGRRVSLFDCSMKNCFGLRV 359          
BLAST of mRNA_S-dermatodea_contig9411.17445.1 vs. uniprot
Match: A0A7S2G7F7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G7F7_9STRA)

HSP 1 Score: 134 bits (337), Expect = 3.560e-35
Identity = 76/156 (48.72%), Postives = 110/156 (70.51%), Query Frame = 0
Query:   15 VVVRGERGVGKSTLLRRLQGLPYEEKYTPTPEIQTTTINNWAYRGSQDVVKVEVWDVVDKGL-ARGGVSRVPEGGDLEDAVSGLP-LDRGSARGGRALAVLDAGVVNVYQGANAVIFMIDPYRPETLDKVEKSLAE-APVSLPAVVLLNFRDKLEE 167
            +V+RG R  GK++L+RRLQGLP+E++YT TPEIQT +IN W+++ +++ V VEVWDVVD+G+ A+  V   P+  D  DA++GLP + + S +  +A   LDA VV++Y+ A   IFM+DP+R  TLD V   L + A   LP +VL+NFRDK+ E
Sbjct:    1 MVIRGCRRTGKTSLMRRLQGLPFEDEYTATPEIQTASIN-WSFKNAEEAVCVEVWDVVDEGIIAKPRVK--PKKEDDMDAIAGLPGISKRSKKEAKASVPLDARVVDIYKDAQVCIFMVDPWRRPTLDYVLNELRQDATNELPVLVLVNFRDKIHE 153          
BLAST of mRNA_S-dermatodea_contig9411.17445.1 vs. uniprot
Match: W7TWE0_9STRA (Gtp-binding protein parf n=5 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWE0_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.260e-34
Identity = 85/186 (45.70%), Postives = 113/186 (60.75%), Query Frame = 0
Query:    3 KLHGTGAQFNMKVVVRGERGVGKSTLLRRLQGLPYEEK-YTPTPEIQTTTINNWAYRGSQDVVKVEVWDVVDKGLARGGV----------SRVPEGGDLEDAVSGLPLD------RG---SARGGRALAVLDAGVVNVYQGANAVIFMIDPYRPETLDKVEKSLAEAPVSLPAVVLLNFRDKLEED 168
            K  G G   N+K+++RGERG GKS LL RL+G P+    Y PTPEI+T TIN W+ +    VVKVE+WDVVDKGL R G           +   +GG   DA++GLPLD      RG    A G  A  VLDA +V+V++G++  IFM++P+    L  V+K LAE P  +P ++L NFRD L +D
Sbjct:   31 KKLGKGVAHNLKIIIRGERGSGKSALLSRLKGQPFTSSVYEPTPEIETATIN-WSAKEDGAVVKVEIWDVVDKGLGRRGSLIGNNVRGTGTVAHDGGGDPDALAGLPLDVPVHAQRGHHAGASGSHAFGVLDATIVDVWKGSHGGIFMMNPFSSTALQYVQKQLAEVPRGIPVLLLANFRDLLLDD 215          
BLAST of mRNA_S-dermatodea_contig9411.17445.1 vs. uniprot
Match: UPI00077A0606 (rab-like protein 6 isoform X1 n=3 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A0606)

HSP 1 Score: 129 bits (323), Expect = 2.150e-31
Identity = 79/177 (44.63%), Postives = 107/177 (60.45%), Query Frame = 0
Query:    8 GAQFNMKVVVRGERGVGKSTLLRRLQGLPYEEKYTPTPEIQTTTINNWAYRGSQDVVKVEVWDVVDKGLAR----GGVSRVPEGGDLEDAVSG---LPLDRGSARGGRALAVLDAGVVNVYQGANAVIFMIDPYRPETLDKVEKSLAEAPVSLPAVVLLNFRDKLE------EDAVA 171
            G Q+NMK++++G+R  GKS L +RLQG P+ E+Y PT EIQ  +I+ W YR + DVVKVEVWDVVDKG ++     G+    E    E + SG   L  D   + G +   VLDA  V+VY+GA+ V+ M+D  +P T   VE+ L + P  LP +VL N RD  E      E+AVA
Sbjct:   38 GIQYNMKIIIKGDRNTGKSCLFQRLQGKPHNEEYIPTNEIQVASIH-WNYRTTDDVVKVEVWDVVDKGRSKKPSLSGLKL--ENDKTERSTSGTFQLAFDGEVSEGEKDATVLDAQFVDVYKGAHGVLMMMDMTKPWTFKYVERELNKVPPHLPVLVLANHRDMGEHRLVQTEEAVA 211          
BLAST of mRNA_S-dermatodea_contig9411.17445.1 vs. uniprot
Match: A0A5K4EFD4_SCHMA (Uncharacterized protein n=1 Tax=Schistosoma mansoni TaxID=6183 RepID=A0A5K4EFD4_SCHMA)

HSP 1 Score: 128 bits (322), Expect = 3.580e-31
Identity = 70/165 (42.42%), Postives = 99/165 (60.00%), Query Frame = 0
Query:    8 GAQFNMKVVVRGERGVGKSTLLRRLQGLPYEEKYTPTPEIQTTTINNWAYRGSQDVVKVEVWDVVDKGLARGGVSRVPEGGDLEDAVSGLPLDRGSARGGRALAVLDAGVVNVYQGANAVIFMIDPYRPETLDKVEKSLAEAPVSLPAVVLLNFRDKLEEDAVAK 172
            G  +NMK+V+RG+R VGKSTLL RL+G  ++E+Y P+ EIQ   I+ W ++ SQ V+KVEVWDVVDKG  R  VS+            G P    + + G     LDA  +NVY+GA+ VI M+D  +P T + V + L + P  LP +++ NF D  E+  V +
Sbjct:   37 GVDYNMKIVIRGDRNVGKSTLLSRLKGEQFKEEYIPSNEIQLANIH-WNHQNSQSVIKVEVWDVVDKGKPRSSVSKGVR--FFNKLTKGQPSINIAGQAGNIEPCLDASFINVYKGAHGVILMMDMTKPSTFEYVCRELIQIPPKLPILIMSNFHDIQEQRKVTE 198          
BLAST of mRNA_S-dermatodea_contig9411.17445.1 vs. uniprot
Match: A0A7D9KBJ0_PARCT (Rab 6 isoform X1 (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KBJ0_PARCT)

HSP 1 Score: 126 bits (316), Expect = 5.280e-31
Identity = 73/168 (43.45%), Postives = 100/168 (59.52%), Query Frame = 0
Query:    6 GTGAQFNMKVVVRGERGVGKSTLLRRLQGLPYEEKYTPTPEIQTTTINNWAYRGSQDVVKVEVWDVVDKGLARGGVSRVPEGGDLEDAVSGLPLDRG-SARGGRALAVLDAGVVNVYQGANAVIFMIDPYRPETLDKVEKSLAEAPVSLPAVVLLNFRDKLEEDAVAK 172
            G G Q+NMK+V++G+R  GKSTLL R QG P++E+Y PT EIQ  +IN W+YR + DVVKVEVWDVVDKG  +         GD      GL L    SA  G+   VLDA  ++VY+G +  + ++D  +  T   +E+ L + P  +P +VL NF D  E   V +
Sbjct:   68 GRGVQYNMKIVIKGDRNTGKSTLLGRFQGKPFKEEYIPTNEIQVCSIN-WSYRVADDVVKVEVWDVVDKGKKK------KSDGD------GLKLANDMSASDGQVAGVLDAEFLDVYKGTHGCVMLLDITKQWTFKYIERELPKVPKHIPVLVLSNFLDMQEHRVVQR 222          
BLAST of mRNA_S-dermatodea_contig9411.17445.1 vs. uniprot
Match: A0A023GBK0_AMBTT (Uncharacterized protein (Fragment) n=1 Tax=Amblyomma triste TaxID=251400 RepID=A0A023GBK0_AMBTT)

HSP 1 Score: 129 bits (323), Expect = 6.370e-31
Identity = 69/163 (42.33%), Postives = 98/163 (60.12%), Query Frame = 0
Query:    3 KLHGTGAQFNMKVVVRGERGVGKSTLLRRLQGLPYEEKYTPTPEIQTTTINNWAYRGSQDVVKVEVWDVVDKGLARGGVSRVPEGGDLEDAVSGLPLDR--GSARGGRALAVLDAGVVNVYQGANAVIFMIDPYRPETLDKVEKSLAEAPVSLPAVVLLNFRD 163
            K    G Q+NMK+V++G+R VGKS LL RLQG P++++Y P+ EIQ  +I  W+Y+ + D+VKVEVWDVVDKG  R               + GL LD   G  +G    A LDA  ++VY+G N V+ M+D  +  T D V++ L + P ++P +VL N  D
Sbjct:   40 KRFARGVQYNMKIVIKGDRNVGKSCLLLRLQGQPFKDEYLPSDEIQVASIQ-WSYKATDDIVKVEVWDVVDKGKKR-------------KPIKGLKLDNTAGDGQGVPEEAALDAEFIDVYKGTNGVVMMLDITKQWTFDYVQRELPKVPANIPVLVLANHLD 188          
BLAST of mRNA_S-dermatodea_contig9411.17445.1 vs. uniprot
Match: A0A8B7XYQ9_ACAPL (rab-like protein 6 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XYQ9_ACAPL)

HSP 1 Score: 130 bits (327), Expect = 2.690e-30
Identity = 72/165 (43.64%), Postives = 100/165 (60.61%), Query Frame = 0
Query:    8 GAQFNMKVVVRGERGVGKSTLLRRLQGLPYEEKYTPTPEIQTTTINNWAYRGSQDVVKVEVWDVVDKGLARGGVSRVPEGGDLEDAVSGLPLDRGSARGGRALAVLDAGVVNVYQGANAVIFMIDPYRPETLDKVEKSLAEAPVSLPAVVLLNFRDKLEEDAVAK 172
            G Q+NMK++++G+R  GK+TL  RLQG  + E+Y PTPEIQ  +I  W Y+ + D+VKVEVWDVVDKG A+    +  EG  LE +     +D G          LDA  +NVY+GAN V+FM+D  +  T   VE+ L   P  +P +VL +FRD  +   VA+
Sbjct:   38 GVQYNMKIIIKGDRNTGKTTLFHRLQGERFREEYLPTPEIQVASIQ-WNYKATDDIVKVEVWDVVDKGKAK----KKSEGLKLETSQD---MDEGDE------PCLDARFLNVYKGANGVVFMVDVTKQWTWGYVERELPSVPNHIPVLVLASFRDMADHRTVAE 188          
BLAST of mRNA_S-dermatodea_contig9411.17445.1 vs. uniprot
Match: UPI001455237A (rab-like protein 6 n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455237A)

HSP 1 Score: 130 bits (327), Expect = 2.790e-30
Identity = 72/165 (43.64%), Postives = 97/165 (58.79%), Query Frame = 0
Query:    8 GAQFNMKVVVRGERGVGKSTLLRRLQGLPYEEKYTPTPEIQTTTINNWAYRGSQDVVKVEVWDVVDKGLARGGVSRVPEGGDLEDAVSGLPLDRGSARGGRALAVLDAGVVNVYQGANAVIFMIDPYRPETLDKVEKSLAEAPVSLPAVVLLNFRDKLEEDAVAK 172
            G Q+NMK++++G+R  GK+TL  RLQG  ++E+Y PTPEIQ T+I  W Y+ + DVVKVEVWDVVDKG ++                 GL LD            LDA  +NVY+GAN V+FM+D  +  T   VE+ L   P  +P +VL +FRD  E   VA+
Sbjct:   38 GVQYNMKIIIKGDRNTGKTTLFHRLQGERFKEEYLPTPEIQVTSIQ-WNYKATDDVVKVEVWDVVDKGKSK-------------KKADGLKLDTTHEVEETDEPCLDASFLNVYKGANGVVFMVDITKQWTWGYVERELPNVPNHIPVLVLASFRDISEHRTVAE 188          
BLAST of mRNA_S-dermatodea_contig9411.17445.1 vs. uniprot
Match: A0A7R9TV30_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TV30_MICPS)

HSP 1 Score: 124 bits (310), Expect = 3.630e-30
Identity = 72/163 (44.17%), Postives = 101/163 (61.96%), Query Frame = 0
Query:    2 RKLHGTGAQFNMKVVVRGERGVGKSTLLRRLQGLPYEEKYTPTPEIQTTTINNWAYRGS-QDVVKVEVWDVVDKGLARGGVSRVPEGGDLEDAVSGLPLDRGSARGGRALAVLDAGVVNVYQGANAVIFMIDPYRPETLDKVEKSLAEAPVSLPAVVLLNFRD 163
            R+ +  GA+FN KVV+RG+ G GKSTL+RRL+G  +  +YTPTPEI+T+ I  W  R S +D V +EVWDVVDK   R     +         VS   +  G+  GG     LDA V++VY+GA+A +F++DP +  T +  ++ LA AP  +P  +LLNFRD
Sbjct:    2 RQKYAKGAKFNFKVVLRGDIGTGKSTLMRRLRGGTFIPEYTPTPEIKTSHIK-WTARSSPEDNVMLEVWDVVDKAAKRAVSDALKTMAHDGARVSESHVMMGAKEGGHTYP-LDASVIDVYKGAHAAVFLVDPSKRWTYEYAKRELAAAPEHVPTAILLNFRD 162          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9411.17445.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBT7_ECTSI1.410e-11271.01RBEL1, Ras superfamily GTPase n=2 Tax=Ectocarpus T... [more]
A0A7S2G7F7_9STRA3.560e-3548.72Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
W7TWE0_9STRA1.260e-3445.70Gtp-binding protein parf n=5 Tax=Monodopsidaceae T... [more]
UPI00077A06062.150e-3144.63rab-like protein 6 isoform X1 n=3 Tax=Acropora dig... [more]
A0A5K4EFD4_SCHMA3.580e-3142.42Uncharacterized protein n=1 Tax=Schistosoma manson... [more]
A0A7D9KBJ0_PARCT5.280e-3143.45Rab 6 isoform X1 (Fragment) n=1 Tax=Paramuricea cl... [more]
A0A023GBK0_AMBTT6.370e-3142.33Uncharacterized protein (Fragment) n=1 Tax=Amblyom... [more]
A0A8B7XYQ9_ACAPL2.690e-3043.64rab-like protein 6 n=1 Tax=Acanthaster planci TaxI... [more]
UPI001455237A2.790e-3043.64rab-like protein 6 n=1 Tax=Asterias rubens TaxID=7... [more]
A0A7R9TV30_MICPS3.630e-3044.17Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF08477Roccoord: 14..71
e-value: 1.6E-6
score: 28.3
NoneNo IPR availableGENE3D3.40.50.300coord: 7..180
e-value: 3.8E-19
score: 70.5
IPR040385Rab-like protein 6PANTHERPTHR14932RAS GTPASE-RELATEDcoord: 2..171
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 13..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9411contigS-dermatodea_contig9411:136..3318 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9411.17445.1mRNA_S-dermatodea_contig9411.17445.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9411 136..3318 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9411.17445.1 ID=prot_S-dermatodea_contig9411.17445.1|Name=mRNA_S-dermatodea_contig9411.17445.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=295bp
RRKLHGTGAQFNMKVVVRGERGVGKSTLLRRLQGLPYEEKYTPTPEIQTT
TINNWAYRGSQDVVKVEVWDVVDKGLARGGVSRVPEGGDLEDAVSGLPLD
RGSARGGRALAVLDAGVVNVYQGANAVIFMIDPYRPETLDKVEKSLAEAP
VSLPAVVLLNFRDKLEEDAVAKASGKSRSPQPPPPPPTPPPPEKKPSTDP
PTPLKDNGDGNVAAGDGSAIAKEGVAAQAGEGGVGKEEAGGGGVGADAWA
HVATLETARAMMDRVREVDIAEGRGSGRRVSLFDCSMKNCFGLRV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040385RABL6
IPR027417P-loop_NTPase