prot_S-dermatodea_contig9378.17416.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9378.17416.1
Unique Nameprot_S-dermatodea_contig9378.17416.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length193
Homology
BLAST of mRNA_S-dermatodea_contig9378.17416.1 vs. uniprot
Match: A0A6H5J6K0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6K0_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 9.600e-13
Identity = 36/79 (45.57%), Postives = 45/79 (56.96%), Query Frame = 0
Query:   33 YPDCNPEFILHLGNGRCSDVFNIAACGYDGGDCCECTCKDTD---VLTCGTGGFNCVDPEALCALGAAIPLKAILASDD 108
            YPDC  E++    +G C D  N AACGYDGGDCC CTC+D       TCG  G++C+DP+A  A     P  +  A  D
Sbjct:  142 YPDCE-EYLYEWQDGVCDDNLNTAACGYDGGDCCRCTCRDYSSWGYSTCGYYGYDCMDPDAPSACSTDSPTPSPAAGTD 219          
BLAST of mRNA_S-dermatodea_contig9378.17416.1 vs. uniprot
Match: A0A6H5JVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVP4_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 2.940e-12
Identity = 34/63 (53.97%), Postives = 42/63 (66.67%), Query Frame = 0
Query:   30 SAKYPDCNPEFILHLGNGRCSDVFNIAACGYDGGDCCECTCKDTDVLTCGTGG--FNCVDPEA 90
            +A YPDC  +  L +G+  C   FN+A CG+DGGDCCECTC DT    CG GG  + CVDP+A
Sbjct:   58 AALYPDCEADTAL-VGDSICDLDFNVAECGFDGGDCCECTCVDTGDQVCGEGGGGYFCVDPDA 119          
BLAST of mRNA_S-dermatodea_contig9378.17416.1 vs. uniprot
Match: D7FX76_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX76_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 4.000e-12
Identity = 45/118 (38.14%), Postives = 54/118 (45.76%), Query Frame = 0
Query:    1 MGRSLKRCGVSLLFVAMAWVASALAL-------------QTDS-------------AKYPDCNPEFILHLGNGRCSDVFNIAACGYDGGDCCECTCKDTDVLTCGTGG--FNCVDPEA 90
            M R  +R G      + AW   AL L             Q DS             A YPDC  +  L +G+  C    N+A CG+DGGDCCECTC DT    CG GG  + CVDP+A
Sbjct:    1 MARRRRRAGPVRFVASRAWFVGALVLLLRRSAWEGGVAAQEDSDDGNDGGSTSAPTALYPDCEADMAL-VGDSLCDFDVNVAECGFDGGDCCECTCVDTGDQVCGEGGTGYFCVDPDA 117          
BLAST of mRNA_S-dermatodea_contig9378.17416.1 vs. uniprot
Match: A0A6H5KXZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXZ8_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 8.460e-12
Identity = 41/116 (35.34%), Postives = 57/116 (49.14%), Query Frame = 0
Query:   15 VAMAWVASALAL--------QTDSAKYPDCN---PEFILHLGNGRCSDVFNIAACGYDGGDCCECTC-----KDTDVLT---CGTGGFNCVDPEALCALGAAIPLKAILASDDGSS 111
            VA  W A AL L         + +  +P C+   PE  L LG+G C  ++NI  CGYDGGDCC CTC     +  D      CG+ G++C+DP A C       L+ + +  D  +
Sbjct:    5 VARCWSAVALQLCLAMCFSGVSSTPSFPGCDVMKPEDALSLGDGVCDMLYNIQDCGYDGGDCCPCTCLGRRDRGQDSAADDACGSSGYHCLDPMAPCLAEHETALRELQSGSDADT 120          
BLAST of mRNA_S-dermatodea_contig9378.17416.1 vs. uniprot
Match: A0A6H5L262_9PHAE (LNR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L262_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 9.100e-12
Identity = 27/49 (55.10%), Postives = 31/49 (63.27%), Query Frame = 0
Query:   44 LGNGRCSDVFNIAACGYDGGDCCECTCKDTDVLTCGTGGFNCVDPEALC 92
            +G+G C    N A CGYDGGDCCECTC       CG GG+ C+DP A C
Sbjct:   47 VGDGNCDRDINFAECGYDGGDCCECTCVAEGEYECGAGGYACIDPAAEC 95          
BLAST of mRNA_S-dermatodea_contig9378.17416.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 2.190e-11
Identity = 29/64 (45.31%), Postives = 38/64 (59.38%), Query Frame = 0
Query:   26 LQTDSAKYPDCNPEFILHLGNGRCSDVFNIAACGYDGGDCCECTCKDTDVLTCGTGGFNCVDPE 89
            L   +A+Y  C    I  +GNGRC    N+ +CGYDGGDCC CTC D  +  C  G F+C+ P+
Sbjct:   21 LHGGAAQYDTCTNGAIADIGNGRCDAELNVPSCGYDGGDCCSCTCVDGPLYWCSEGTFDCLYPD 84          
BLAST of mRNA_S-dermatodea_contig9378.17416.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 2.200e-11
Identity = 31/76 (40.79%), Postives = 43/76 (56.58%), Query Frame = 0
Query:   14 FVAMAWVASALALQTDSAKYPDCNPEFILHLGNGRCSDVFNIAACGYDGGDCCECTCKDTDVLTCGTGGFNCVDPE 89
            F A A+    L L++  A+Y  C    +  +GNG C    N+A+CGYDGGDCC CTC D  +  C    F+C+ P+
Sbjct:   11 FTASAFTILCL-LRSGIAQYDSCTGGNVTDIGNGNCDAALNVASCGYDGGDCCSCTCNDGPLHLCADSDFDCMYPD 85          
BLAST of mRNA_S-dermatodea_contig9378.17416.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 3.030e-11
Identity = 28/60 (46.67%), Postives = 40/60 (66.67%), Query Frame = 0
Query:   30 SAKYPDCNPEFILHLGNGRCSDVFNIAACGYDGGDCCECTCKDTDVLTCGTGGFNCVDPE 89
            +A+Y +CN   +  +GNG+C  V N+ +CGYDGGDCC CTC D    +C T  F+C+ P+
Sbjct:   23 TAQYANCNGT-VTDIGNGQCDAVLNVPSCGYDGGDCCPCTCVDGPTHSCSTSDFDCMYPD 81          
BLAST of mRNA_S-dermatodea_contig9378.17416.1 vs. uniprot
Match: D8LEP6_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP6_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 3.730e-11
Identity = 33/75 (44.00%), Postives = 48/75 (64.00%), Query Frame = 0
Query:   19 WVASALALQTDSAKYPDCNPEFILHLGNGRCSDVFNIAACGYDGGDCCECTCKDTDVLTCGTG-GFNCVDPEALC 92
            W +++  + T S ++  C+      +GNGRC+   NI  CG+DGGDCCECTC+D +  TCG   G+ C+DP+A C
Sbjct:   75 WSSASSVVATTSDQFDACDAA--QDIGNGRCNMGNNIEECGFDGGDCCECTCEDGE-YTCGQYYGYACIDPDATC 146          
BLAST of mRNA_S-dermatodea_contig9378.17416.1 vs. uniprot
Match: D7FX77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX77_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 3.770e-11
Identity = 33/80 (41.25%), Postives = 44/80 (55.00%), Query Frame = 0
Query:   33 YPDCNPEFILHLGNGRCSDVFNIAACGYDGGDCCECTCKDTD----VLTCGTGGFNCVDPEALCALGAAIPLKAILASDD 108
            YPDC  E++    +G C D  N A CGYDGGDCC CTC+D +       CG  G++C+DP+A  +     P  +  A  D
Sbjct:  142 YPDCE-EYLYEWQDGVCDDNLNTAECGYDGGDCCRCTCRDYNSWGYYTNCGYYGYDCMDPDAPSSCSTDSPTPSPAAGTD 220          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9378.17416.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J6K0_9PHAE9.600e-1345.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVP4_9PHAE2.940e-1253.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX76_ECTSI4.000e-1238.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KXZ8_9PHAE8.460e-1235.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L262_9PHAE9.100e-1255.10LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FTI5_ECTSI2.190e-1145.31Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D8LSC0_ECTSI2.200e-1140.79Polymorphic Outer membrane protein G/I family n=3 ... [more]
D7G5Y7_ECTSI3.030e-1146.67Polymorphic Outer membrane protein G/I family n=1 ... [more]
D8LEP6_ECTSI3.730e-1144.00Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
D7FX77_ECTSI3.770e-1141.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 150..170
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 171..192
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..149
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.875
NoneNo IPR availableTMHMMTMhelixcoord: 7..26
NoneNo IPR availableTMHMMTMhelixcoord: 148..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9378contigS-dermatodea_contig9378:3538..6937 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9378.17416.1mRNA_S-dermatodea_contig9378.17416.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9378 2202..7002 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9378.17416.1 ID=prot_S-dermatodea_contig9378.17416.1|Name=mRNA_S-dermatodea_contig9378.17416.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=193bp
MGRSLKRCGVSLLFVAMAWVASALALQTDSAKYPDCNPEFILHLGNGRCS
DVFNIAACGYDGGDCCECTCKDTDVLTCGTGGFNCVDPEALCALGAAIPL
KAILASDDGSSFVPSYSPTSSPTSSPTSFFESVFNDVDLSSASNLTSTTI
GVIIGVCLVALLLAGAFYIYRKKRAGADSSAGYTTSNSANYA*
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