prot_S-dermatodea_contig936.17404.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig936.17404.1
Unique Nameprot_S-dermatodea_contig936.17404.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length717
Homology
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BLAST of mRNA_S-dermatodea_contig936.17404.1 vs. uniprot
Match: D7FUJ6_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ6_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 1.100e-5
Identity = 23/39 (58.97%), Postives = 27/39 (69.23%), Query Frame = 0 
Query:    1 MVDVRKKHCGHNGCFKWPSYGTEGSTKADFCSEHKRAGM 39
            MVDV  K CGH GC K PSYG +GS KA+ C++H   GM
Sbjct:    1 MVDVVSKRCGHPGCTKRPSYGNDGSKKAELCAQHALQGM 39
[Close]
BLAST of mRNA_S-dermatodea_contig936.17404.1 vs. uniprot
Match: D7G985_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G985_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 2.190e-5
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 0 
Query:    1 MVDVRKKHCGHNGCFKWPSYGTEGSTKADFCSEHKRAGM 39
            M+DV  K CGH GC K PSYGT+GS K +FC++H + GM
Sbjct:    1 MIDVVCKRCGHLGCMKRPSYGTDGSKKREFCAQHSQQGM 39
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig936.17404.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUJ6_ECTSI1.100e-558.97EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7G985_ECTSI2.190e-558.97EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 531..551
NoneNo IPR availableCOILSCoilCoilcoord: 499..526
NoneNo IPR availableCOILSCoilCoilcoord: 589..616

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig936contigS-dermatodea_contig936:10270..22543 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig936.17404.1mRNA_S-dermatodea_contig936.17404.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig936 1806..22543 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig936.17404.1 ID=prot_S-dermatodea_contig936.17404.1|Name=mRNA_S-dermatodea_contig936.17404.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=717bp
MVDVRKKHCGHNGCFKWPSYGTEGSTKADFCSEHKRAGMVDVKGKRCAYN
GCSKHPSFGTEGSKEAKFCNEHKRAGMVNIKRKRCAYHECYKQPSYGTVG
SRKAEFCSEHKRAGMVDVVSKRCAYHGCSKIPSYGTEVSRKKEFCNEHKR
AGMVDVVSKRCAYHGCSKIPSYGPEGSRKAEFCSEHKGVGIVSVKRKRCT
PYACSETPSFGTEGSKEMEFSSEHKRAGMVDGLRKRCTGEGCGEYAVYGQ
DGSRRQRLLRSQRFTESHHAGASAVEAAKARQEAKEVGEGAAVQAALPNT
RERPLRVERSPRQVNKVSALVLESSPTRSPTGCTPLASQHRSDQSRGAYL
CEGDTKLFECGRCAHNLGQDDGATSREPKRCTLSGCARDDDRDLPIDSCV
APEKPAQLIPAQGIARTDTGEGEVTESTGITASVDRALARCGGCERDDAG
VGNAFITSRFAGAKRNVSTTSRQGLRHIRKSSASDLQDLRKIASLKKGKR
EAVVEVNTLRDEVEELKKQVADAAVDRVHAVDEATRKIEENYTEISQALR
EELGAASWVSKDRKGVLEAVCDEHQAVRQQIQAQVAAAASKIKAEAAKTE
KVKQDFQQRMKALRAELTATSTGWENTNDDLKQIRQERDPRHKELVAQVV
FDADIATKVAPISKDLGHRVKRVKGRPGKAVQTRGMVDTIAPGPVDVKVE
EGDANDHMGLDELYFGG
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