mRNA_S-dermatodea_contig9350.17395.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9350.17395.1 vs. uniprot
Match: D7G6P0_ECTSI (Hexosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6P0_ECTSI) HSP 1 Score: 407 bits (1046), Expect = 7.600e-132 Identity = 188/243 (77.37%), Postives = 213/243 (87.65%), Query Frame = 3
Query: 6 ARAKRDTLREMYDKYEGWVSVGGKLSHPGTNREEREFSFRVVFVISSPSAPPDGELVGDVLYVDAPDGYRNIVHKVKQMMGLVRHIDFKYLLKADDDTFVCVQRLATFLHDQPPEIKEKIYAGVPTACNVPTNPNKHIGEVIKDRQDKWYDQKFVHHTLSGLDCFPVYMQGAFYVLAQPLVEHLYRGRDHYDTFINEDVTVGSWLLGVDRALATIHDFESARLWNCVCGGDFVMRDRLRKHQV 734
AR KRDT+RE+YDKY GWV+VGG+ S N E E F+V+FV++ +APPDGELVGDVLYV+APDGYRNIV+KVK MMGLVRHIDFK+LLKADDDTFVCV+RLA FLH+QP E K+KIYAGVPTACN P NP+ +G VIKD +DKWYDQKFVHHTL+GLDC+PVYMQGAFYVLAQPLVEHLYRGR+HYDTFINEDVTVGSWLLGVDRAL TIHDFES+RLWNCVCG +FV+R +RK Q
Sbjct: 195 ARLKRDTIRELYDKYGGWVTVGGERSQE-QNEETVEMEFQVIFVVTRSTAPPDGELVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLANFLHNQPEESKDKIYAGVPTACNSPANPSVKVGRVIKDHKDKWYDQKFVHHTLAGLDCYPVYMQGAFYVLAQPLVEHLYRGREHYDTFINEDVTVGSWLLGVDRALGTIHDFESSRLWNCVCGSNFVLRPAVRKDQA 436
BLAST of mRNA_S-dermatodea_contig9350.17395.1 vs. uniprot
Match: A0A6H5KLW3_9PHAE (Hexosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLW3_9PHAE) HSP 1 Score: 342 bits (876), Expect = 7.920e-109 Identity = 157/267 (58.80%), Postives = 202/267 (75.66%), Query Frame = 3
Query: 12 AKRDTLREMYDKYEGWVSVGGKLS-HPGTNREEREFSFRVVFVISSPSAPPDGELVGDVLYVDAPDGYRNIVHKVKQMMGLVRHIDFKYLLKADDDTFVCVQRLATFLHDQPPEIKEKIYAGVPTACNVPTNPNKHIGEVIKDRQDKWYDQKFVHHTLSGLDCFPVYMQGAFYVLAQPLVEHLYRGRDHYDTFINEDVTVGSWLLGVDRALATIHDFESARLWNCVCGGDFVMRDRLRKHQVFFHSCKQTSELRKCSNRLVRPMLRC 809
AKR+ LR++YDKYEGWV VGG S GTN E REF+ VVFV+S +APP+GELVGD+LYV P+GYRNIV K K M+ LVRH DF++LLKADDD+FVC+ R+A+ LHD PEI K+YAGVPTACN TNP+ G V+K+ +W+D K+V HTL GLDCFP YMQGAFY+LAQPLVEHLYRG +H + F NEDVT+GSWL+GVDR + +++ ++ LW+C+C + + R+ Q+FFH+CK S+L+ C RL+RP + C
Sbjct: 36 AKRELLRQIYDKYEGWVKVGGPNSLTEGTNPEPREFTVSVVFVMSKETAPPEGELVGDILYVAVPEGYRNIVLKTKAMLCLVRHFDFEFLLKADDDSFVCLTRIASMLHDLDPEISGKVYAGVPTACNQSTNPDYWNGRVMKNPDHRWFDSKYVQHTLGGLDCFPAYMQGAFYILAQPLVEHLYRGHEHLECFTNEDVTIGSWLMGVDREMVEMYNLHTSHLWDCLCARTQITV-KTRRKQMFFHNCKGLSQLKLCGTRLLRPGVGC 301
BLAST of mRNA_S-dermatodea_contig9350.17395.1 vs. uniprot
Match: D8LT07_ECTSI (Beta-1,3-n-acetylglucosaminyltransferase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT07_ECTSI) HSP 1 Score: 337 bits (865), Expect = 9.950e-103 Identity = 155/267 (58.05%), Postives = 199/267 (74.53%), Query Frame = 3
Query: 12 AKRDTLREMYDKYEGWVSVGGKLS-HPGTNREEREFSFRVVFVISSPSAPPDGELVGDVLYVDAPDGYRNIVHKVKQMMGLVRHIDFKYLLKADDDTFVCVQRLATFLHDQPPEIKEKIYAGVPTACNVPTNPNKHIGEVIKDRQDKWYDQKFVHHTLSGLDCFPVYMQGAFYVLAQPLVEHLYRGRDHYDTFINEDVTVGSWLLGVDRALATIHDFESARLWNCVCGGDFVMRDRLRKHQVFFHSCKQTSELRKCSNRLVRPMLRC 809
AKR+ LR++YDKYEGWV VGG S G N E REF+ VVFV+S +APP+GELVGD+LYV P+GYRNIV K K M+ LVRH DF +LLKADDD+FVC+ R+A+ LHD PEI+ K+Y GVPTACN TNP+ G V+K+ +W+D K+V HTL GLDCFP YMQGAFY+LAQPLVEHLYRG +H + F NEDVT+GSWL+GVDR + +++ ++ LW+C+C + +KH +FFH+CK S+L+ C RL+RP + C
Sbjct: 372 AKRELLRQIYDKYEGWVKVGGPNSLTEGKNPEPREFTVSVVFVMSKETAPPEGELVGDILYVAVPEGYRNIVLKTKAMLCLVRHFDFDFLLKADDDSFVCLTRIASMLHDLDPEIRGKVYVGVPTACNQSTNPDYWNGRVMKNPDHRWFDSKYVQHTLGGLDCFPAYMQGAFYILAQPLVEHLYRGHEHLECFTNEDVTIGSWLMGVDREMVEMYNLRTSHLWDCLCARTQITVKTRKKH-MFFHNCKGLSQLKLCGTRLLRPGVGC 637
BLAST of mRNA_S-dermatodea_contig9350.17395.1 vs. uniprot
Match: A0A835YWI3_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWI3_9STRA) HSP 1 Score: 268 bits (685), Expect = 2.150e-79 Identity = 127/264 (48.11%), Postives = 179/264 (67.80%), Query Frame = 3
Query: 3 DARAKRDTLREMYDKYEGWVSVG-GKLSHPGTNREEREFSFRVVFVISSPSAPPDGELVGDVLYVDAPDGYRNIVHKVKQMMGLVRHIDFKYLLKADDDTFVCVQRLATFLHDQPPEIKEKIYAGVPTACNVPTNPNKHIGEVIKDRQDKWYDQKFVHHTLSGLDCFPVYMQGAFYVLAQPLVEHLYRGRDHYDTFINEDVTVGSWLLGVDRALATIHDFESARLWNCVCGGDFVMRDRL--RKHQ--VFFHSCKQTSELRKCS 779
D +RD +R +Y +Y G V + GK S +++ F++VFV AP DG L GD L ++APDGYRNIVHK K M+ L++H++FKYL+K+DDDTFVCVQ++ LH+ P E K+K+YAGVPT CN+P + + +G V D KWYD+++V HT+ ++C+P Y QGA Y+L++ LVE LY+GRDH TFINEDVT+G+WL+GVDR++ ++ D + ARLW C C D + HQ FFH+CKQ ++ KC+
Sbjct: 126 DDAKRRDLMRRIYGRYRGRVVLNRGKKSR-------KKYKFKLVFVRGRSDAPEDGVLNGDTLLINAPDGYRNIVHKTKGMVSLLKHVNFKYLMKSDDDTFVCVQQVFHRLHNLPEETKKKVYAGVPTHCNMPGH--QMVGRVFSDPTHKWYDERYVEHTMGSMECYPPYHQGAGYILSRSLVEFLYKGRDHLLTFINEDVTMGTWLMGVDRSVVSLRDLDGARLWECTCASYRFAHDAAFHKNHQNNAFFHNCKQAWQMLKCA 380
BLAST of mRNA_S-dermatodea_contig9350.17395.1 vs. uniprot
Match: A0A6H5JHW0_9PHAE (Hexosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHW0_9PHAE) HSP 1 Score: 265 bits (676), Expect = 1.010e-77 Identity = 129/265 (48.68%), Postives = 172/265 (64.91%), Query Frame = 3
Query: 3 DARAKRDTLREMYDKYEGWVSVGGKLSHPGTNREEREFSFRVVFVISSPSAPPDGELVGDVLYVDAPDGYRNIVHKVKQMMGLVRHIDFKYLLKADDDTFVCVQRLATFLHDQPPEIKEKIYAGVPTACNVPTNPNKHIGEVIKDRQDKWYDQKFVHHTLSGLDCFPVYMQGAFYVLAQPLVEHLYRGRDHYDTFINEDVTVGSWLLGVDRALATIHDFESARLWNCVC-------GGDFVMRDRLRKHQVFFHSCKQTSELRKC 776
DA AKRD +REMY Y GG++ + ++F+V++V+ P A G+L+ DVL+V GYRNI K K+M+ V+H+ FKYLLK DDDTFVC++R A+ +H P IK K+Y G+PTAC++P NPN +G+VI D DKWYD K+++HT++GLDC+PVYMQGAFY+L+ PLVE L +G TF NEDVT+G WL GVDRA+ ++D AR+W C C GGD VFFH+CK +LR C
Sbjct: 158 DALAKRDYMREMYGTY------GGQILITDERGQAFIYTFKVLYVVGHPGAVDMGDLMDDVLFVKVEKGYRNIAAKTKKMLEAVKHVRFKYLLKTDDDTFVCLRRTASQMHLVPAHIKPKVYGGIPTACHLPNNPNDAVGKVIVDMDDKWYDGKYLNHTMNGLDCYPVYMQGAFYILSYPLVEFLNQGSSKLLTFDNEDVTIGLWLHGVDRAIFPLNDLRDARVWECSCKRPNFNPGGDA---------NVFFHNCKSMDDLRGC 407
BLAST of mRNA_S-dermatodea_contig9350.17395.1 vs. uniprot
Match: D7FQB9_ECTSI (Hexosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB9_ECTSI) HSP 1 Score: 261 bits (668), Expect = 4.600e-76 Identity = 127/265 (47.92%), Postives = 172/265 (64.91%), Query Frame = 3
Query: 3 DARAKRDTLREMYDKYEGWVSVGGKLSHPGTNREEREFSFRVVFVISSPSAPPDGELVGDVLYVDAPDGYRNIVHKVKQMMGLVRHIDFKYLLKADDDTFVCVQRLATFLHDQPPEIKEKIYAGVPTACNVPTNPNKHIGEVIKDRQDKWYDQKFVHHTLSGLDCFPVYMQGAFYVLAQPLVEHLYRGRDHYDTFINEDVTVGSWLLGVDRALATIHDFESARLWNCVC-------GGDFVMRDRLRKHQVFFHSCKQTSELRKC 776
DA AKRD +R+MY Y GG++ + ++F+V++V+ P A G+L+ DVL+V GYRNI K K+M+ V+H+ FKYLLKADDDTFVC++R A+ +H P IK K+Y G+PTAC++P NP+ +G+VI D +KWYD K+++HT++GLDC+PVYMQGAFY+L+ PLVE L +G TF NEDVT+G WL GVDRA+ ++D AR+W C C GGD VFFH CK +LR C
Sbjct: 198 DALAKRDYMRKMYGTY------GGQILITDERGQAFIYTFKVLYVVGHPGAADMGDLMDDVLFVKVEKGYRNIAAKTKKMLEAVKHVRFKYLLKADDDTFVCLRRTASQMHLVPAHIKPKVYGGIPTACHLPNNPDDEVGKVIVDMDEKWYDGKYLNHTMNGLDCYPVYMQGAFYILSYPLVEFLNQGSSKLLTFDNEDVTIGLWLHGVDRAIFPLNDLRDARMWECSCKRPNFNPGGDA---------NVFFHGCKGMDDLRGC 447
BLAST of mRNA_S-dermatodea_contig9350.17395.1 vs. uniprot
Match: A0A835YNB7_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNB7_9STRA) HSP 1 Score: 250 bits (638), Expect = 9.040e-75 Identity = 116/224 (51.79%), Postives = 155/224 (69.20%), Query Frame = 3
Query: 123 RVVFVISSPSAPPDGELVGDVLYVDAPDGYRNIVHKVKQMMGLVRHIDFKYLLKADDDTFVCVQRLATFLHDQPPEIKEKIYAGVPTACNVPTNPNKHIGEVIKDRQDKWYDQKFVHHTLSGLDCFPVYMQGAFYVLAQPLVEHLYRGRDHYDTFINEDVTVGSWLLGVDRALATIHDFESARLWNCVCGGDFVMRDRLRKHQV--FFHSCKQTSELRKCSNRL 788
+V+F++S A +G+LVGD+LYV P GYRNIV K K M+ +V H + KYL+K+DDDTFVC+ R+A + PP +KEK+YAG+PTAC + +NP HIG VIKD KW+D KFV HTL GLDC+P Y QGAFY+L++PLV++L++GR TF NEDVT+GSWL+GVDR + + ARLW C C + K+ FFH+CK +L+KC+ L
Sbjct: 2 QVLFLVSHIDASEEGDLVGDILYVQCPAGYRNIVQKTKAMLSIVTHFNHKYLMKSDDDTFVCLNRVAKRMFTLPPAVKEKVYAGIPTACGLESNP--HIGRVIKDPNHKWHDAKFVSHTLGGLDCYPAYHQGAFYLLSEPLVQYLHQGRSKLLTFTNEDVTMGSWLMGVDREMIAFNSISEARLWECTC----AKYTKWLKYDTNAFFHNCKSLDQLQKCAEFL 219
BLAST of mRNA_S-dermatodea_contig9350.17395.1 vs. uniprot
Match: A0A835Z4X8_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4X8_9STRA) HSP 1 Score: 213 bits (541), Expect = 5.070e-59 Identity = 118/316 (37.34%), Postives = 166/316 (52.53%), Query Frame = 3
Query: 6 ARAKRDTLREMYDKYEGWVSV--GGKLSHPGTNREEREFSFRVVFVISSPSAPPDGELVGDVLYVDAPDGYRNIVHKVKQMMGLVRHIDFKYLLKADDDTFVCVQRLATFLHDQPPEIKEKIYAGVPTACNVPTNPNKHIGEVIKDRQDKWYDQKFVHHTLSGLDCFPVYM----------------------------------------------------QGAFYVLAQPLVEHLYRGRDHYDTFINEDVTVGSWLLGVDRALATIHDFESARLWNCVCGGDFVMRDRLRKH-QVFFHSCKQTSELRKCSNRL 788
A KR+ LR Y Y + V LSH +++ +V+F++S P AP DG L GDVLYV P+GYRNIV K K M+ +V H +FKYL+K+DDDT VC+ ++A + PP +++++YAGVPTAC + + + G +I+D KW+D KFV HTL GLDC+P Y QGAFY+L+QPLV HL+RGR F NEDVTVG+W++ ++R + + +A LW+C C LR VF H+CK ++L+ C+ L
Sbjct: 43 AAEKREQLRTSYSAYSKGLHVQDANGLSH--------DYTVKVLFLVSHPDAPEDGLLDGDVLYVRCPEGYRNIVLKTKAMLSVVAHFNFKYLMKSDDDTVVCLNKVAKRMAVLPPAVQDRVYAGVPTACGLEAHSDS--GRIIRDPTHKWHDAKFVAHTLGGLDCYPAYXXXXXXXXXXXXXXXXXXXXXRQRGLRGGACGQSLLELKLAVHNSLDKYPAYHQGAFYLLSQPLVAHLHRGRAQLVAFANEDVTVGAWMMALNREMVALGSLSAAHLWDCTCA---TPTKWLRYDPNVFHHNCKALAQLQACAANL 345
BLAST of mRNA_S-dermatodea_contig9350.17395.1 vs. uniprot
Match: A0A835YTA1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTA1_9STRA) HSP 1 Score: 216 bits (551), Expect = 4.730e-58 Identity = 121/262 (46.18%), Postives = 142/262 (54.20%), Query Frame = 3
Query: 153 APPDGELVGDVLYVDAPDGYRNIVHKVKQMMGLVRHIDFKYLLKADDDTFVCVQRLATFLH---------------------------------------------------DQPPEIKEKIYAGVPTACNVPTNPNKHIGEVIKDRQDKWYDQKFVHHTLSGLDCFPVYMQGAFYVLAQPLVEHLYRGRDHYDTFINEDVTVGSWLLGVDRALATIHDFESARLWNCVCGGDFVMRDRLRKHQVFFHSCKQTSELRKCSNR 785
AP DG L GDV +V AP GY NI KQMM L H F++L K + DTFVC++RL T L Q + ++YAGVPTAC V N N ++G VI D+ ++WYD KFV HT+ GL C+PVYMQGAFYVLAQPLVE L GR H+ TF NEDVTVGSWLLGVDR + TI D +ARLW C C D M RK VFFH CK +LR+C R
Sbjct: 311 APDDGRLDGDVFWVRAPPGYNNIAEMTKQMMAL--HFLFRFLSKINGDTFVCLRRLVTLLAVQXXXXXXXXXXXXXXXXXXXRLVQXXXXXXXXXXXXXXXXXXXXXVTLLAAQTQATQRRLYAGVPTACGVHRN-NPNVGRVIMDKTNRWYDPKFVTHTMGGLPCYPVYMQGAFYVLAQPLVEFLNLGRPHWVTFQNEDVTVGSWLLGVDRDIVTIDDITTARLWGCQCSLD-TMPQWARKSSVFFHDCKALEKLRRCDER 568
BLAST of mRNA_S-dermatodea_contig9350.17395.1 vs. uniprot
Match: A0A835YVE3_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVE3_9STRA) HSP 1 Score: 135 bits (341), Expect = 8.040e-32 Identity = 82/223 (36.77%), Postives = 112/223 (50.22%), Query Frame = 3
Query: 114 FSFRVVFVISSPSAPPDGELVGDVLYVDAPDGYRNIVHKVKQMMGLVRHIDFKYLLKADDDTFVCVQRLATFLHDQPPEIKEKIYAGVPTACNVPTNPNKHIGEVIKDRQDKWYDQKFVHHTLSGLDCFPVYMQGAFYVLAQPLVEHLYRGRDHYDTFINEDVTVGSWLLGVDRALATIH-DFESARLWNCVCGGDFVM-RDRLRKHQVFFHSCKQTSELRKC 776
+SFR FV++ P+APP+G L G+ V+ P+GY + K M L H+DF++L+K D DT+ C+QR+ LH + + ++YAG+ C P H K +D +F T + C P+Y QGAFY+L + LVEHL R RD NED VG WLLG R L I DF C C F R F+H CK ++ C
Sbjct: 85 WSFRKYFVVADPNAPPEGTLTGEFFRVNVPNGYDRLADKTLATMALRHHLDFRFLVKTDADTYPCLQRVIETLHARGVAREPRLYAGLLNRCGK-LFPAGH----------KLHDAQFQAATGGVVPCHPMYHQGAFYILGRALVEHLDRSRDDLQVMSNEDAMVGLWLLGARRVLVDIGGDFH------CAC---FTKPRGEPGNDLPFYHFCKSEDKVAAC 287 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9350.17395.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9350.17395.1 >prot_S-dermatodea_contig9350.17395.1 ID=prot_S-dermatodea_contig9350.17395.1|Name=mRNA_S-dermatodea_contig9350.17395.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=259bp MYDKYEGWVSVGGKLSHPGTNREEREFSFRVVFVISSPSAPPDGELVGDVback to top mRNA from alignment at S-dermatodea_contig9350:119..7818- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9350.17395.1 ID=mRNA_S-dermatodea_contig9350.17395.1|Name=mRNA_S-dermatodea_contig9350.17395.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7700bp|location=Sequence derived from alignment at S-dermatodea_contig9350:119..7818- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9350:119..7818- >mRNA_S-dermatodea_contig9350.17395.1 ID=mRNA_S-dermatodea_contig9350.17395.1|Name=mRNA_S-dermatodea_contig9350.17395.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1554bp|location=Sequence derived from alignment at S-dermatodea_contig9350:119..7818- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |