prot_S-dermatodea_contig9322.17371.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9322.17371.1
Unique Nameprot_S-dermatodea_contig9322.17371.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length326
Homology
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BLAST of mRNA_S-dermatodea_contig9322.17371.1 vs. uniprot
Match: D7FJD5_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJD5_ECTSI)

HSP 1 Score: 246 bits (627), Expect = 9.000e-71
Identity = 157/351 (44.73%), Postives = 199/351 (56.70%), Query Frame = 0 
Query:    1 LQDLIRSGADLNAVTSEGNTPLWHAAFQLSHADVVQALLGGGCSLAGMKFSFKSREAKNKVAPILRDHKARTTGVAEPLDAPVVPRVTVDQPVEPA-----RPQSEPL---------SSIPEGASRPNPDATLLRSEHALKEWMVAGGLQQYFQAVQIFLDEGYSSLYFLVDQVNEKEIVELCTKIGMKAPHKRHFLTRWNELAKSTVIRHG-------SSSPPSRASFEATADQDDDTATA--VRARLKKAKCRVAFDVDNLHGTRSSSQVTTLGDKLRLLHEALLDPSIPKVYVKQHLRAWAVCAGTVVHALHQAGVVWGGVRPESFIVKPGI--FPVLLATDFSRAAL 326
            +QDLIR+ ADL+A+     TPL +A F  ++ DV +ALL  GC+ AG+KF FKSREAK+ + P+L   K R+  V    +    P +    P   A      P   P          +S+ E A R N D   LRS   ++ WM  GGLQ Y Q    FLDEG+SSL+FLV  V ++E+   C  IGM   H++HFL RW++LA  +   +        +S+P           Q DD A A  VRARL K K     DV+    T    +VTTL DK+  L EALLDP+ PK Y+KQ LR WAV A TVV  LH+AGVVWG VRP++FIVK G   FPVLLATDFSRAA+
Sbjct:   30 VQDLIRNDADLDALDLSRWTPLQYAVFN-NYPDVARALLDAGCNTAGIKFDFKSREAKDTMKPLLIACKRRSEQVQPEREIVFTPAMAAAPPARAAVEVAPNPXXXPRLSAGSVGSGTSVGEWARRINVDEETLRSRDGMERWMQEGGLQGYTQK---FLDEGFSSLFFLVSNVEKQEVATFCKNIGMLPVHQKHFLQRWDDLAVQSPPENAGRGNDPEASAPRGEGKRREETQQRDDAAVADSVRARLLKCKNLAVLDVN----TEGGKKVTTLRDKVCQLQEALLDPTYPKAYIKQRLRTWAVSAATVVQDLHRAGVVWGSVRPDTFIVKSGDTPFPVLLATDFSRAAI 372
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9322.17371.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJD5_ECTSI9.000e-7144.73Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 18..44
e-value: 0.016
score: 15.6
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..73
e-value: 1.2E-7
score: 33.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 4..44
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..45
score: 11.532

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9322contigS-dermatodea_contig9322:1048..8188 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9322.17371.1mRNA_S-dermatodea_contig9322.17371.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9322 1048..8188 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9322.17371.1 ID=prot_S-dermatodea_contig9322.17371.1|Name=mRNA_S-dermatodea_contig9322.17371.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=326bp
LQDLIRSGADLNAVTSEGNTPLWHAAFQLSHADVVQALLGGGCSLAGMKF
SFKSREAKNKVAPILRDHKARTTGVAEPLDAPVVPRVTVDQPVEPARPQS
EPLSSIPEGASRPNPDATLLRSEHALKEWMVAGGLQQYFQAVQIFLDEGY
SSLYFLVDQVNEKEIVELCTKIGMKAPHKRHFLTRWNELAKSTVIRHGSS
SPPSRASFEATADQDDDTATAVRARLKKAKCRVAFDVDNLHGTRSSSQVT
TLGDKLRLLHEALLDPSIPKVYVKQHLRAWAVCAGTVVHALHQAGVVWGG
VRPESFIVKPGIFPVLLATDFSRAAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom