mRNA_S-dermatodea_contig9212.17280.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_S-dermatodea_contig9212.17280.1
Unique Name	mRNA_S-dermatodea_contig9212.17280.1
Type	mRNA
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)

Homology

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BLAST of mRNA_S-dermatodea_contig9212.17280.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 1.190e-30
Identity = 68/176 (38.64%), Postives = 100/176 (56.82%), Query Frame = 1

Query:   34 AMNQCKDLPVEWPKTGGEL---------SSSGVMKISIGAGDGILIRRKKPNKDEYIAPARFFYWHKMAVGLNMQAICGSSYIC---------SSPSRATAQHERQDCV------GPYVVTGYAAYGPSEKIIVPYPGIGLQCYTDAYNYYQSQSRMAIEQAFGILVRTWGILWRP 489
            A+NQ ++L   WP+    L         S++GV+++ +GA DG+ +R  +P+   ++ P  F+  HK   G+N Q +C + Y           S   R   +H     V      G Y+V G AAY  S++++VPYPG  L    DAYN+YQSQ+R++IEQAFGI+V+TWGILWRP
Sbjct:  144 AINQTRELDCVWPEGEDALDQCGMYRRRSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQGVCNARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIV-GDAAYPASDQVLVPYPGTSLTRSQDAYNFYQSQARISIEQAFGIMVKTWGILWRP 318

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BLAST of mRNA_S-dermatodea_contig9212.17280.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 2.370e-28
Identity = 71/176 (40.34%), Postives = 93/176 (52.84%), Query Frame = 1

Query:   34 AMNQCKDLPVEWPK-----TGGEL----SSSGVMKISIGAGDGILIRRKKPNKDEYIAPARFFYWHKMAVGLNMQAICGSSYIC---------SSPSRATAQHERQDCV------GPYVVTGYAAYGPSEKIIVPYPGIGLQCYTDAYNYYQSQSRMAIEQAFGILVRTWGILWRP 489
            A+N C +L  +WP+        EL    SS  V++  +GA DG+ +R  KP+  E   P  ++  HK   G+N QA+C + Y           S   R        D +      G +VV G AAYG SE+++VP+PG  L    DA NYY SQ RMAIEQ +GILVR WGILWRP
Sbjct:  137 ALNACPELNCKWPEGEDAARAAELFRNRSSMDVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVV-GDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRP 311

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BLAST of mRNA_S-dermatodea_contig9212.17280.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 5.100e-27
Identity = 67/175 (38.29%), Postives = 95/175 (54.29%), Query Frame = 1

Query:   34 AMNQCKDLPVEWP-----KTGGEL----SSSGVMKISIGAGDGILIRRKKPNKDEYIAPARFFYWHKMAVGLNMQAICGSSYIC---------SSPSRATAQHERQDCVGPYV-----VTGYAAYGPSEKIIVPYPGIGLQCYTDAYNYYQSQSRMAIEQAFGILVRTWGILWRP 489
            A+NQ + L  +WP     +   EL    S++GV++  +GA DG+ +R   P    +  P  F+  HK A G+N Q IC +SY           S   R   +H   D +   +     + G AAY  S +++VP PG  L    DAYN+YQSQ+R++IEQAFGILV+TW ILW+P
Sbjct:  148 AINQTRQLNCKWPYGDDAEAQAELYRRRSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQGICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVPDPGTALTLSQDAYNFYQSQARISIEQAFGILVKTWEILWKP 322

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BLAST of mRNA_S-dermatodea_contig9212.17280.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 2.120e-26
Identity = 59/143 (41.26%), Postives = 81/143 (56.64%), Query Frame = 1

Query:  103 VMKISIGAGDGILIRRKKPNKDEYIAPARFFYWHKMAVGLNMQAICGSSY--ICSSPSRATAQHERQ------------DCVGPYVVTGYAAYGPSEKIIVPYPGIGLQCYTDAYNYYQSQSRMAIEQAFGILVRTWGILWRP 489
            V++  +GA DG+ +R  KP+  E   P  ++  HK   G+N QA+C + Y  +  + S   +Q++R                  + V G AAYG SE+++VP+PG  L    DA NYY SQ RMAIEQ +GILVR WGILWRP
Sbjct:   17 VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKNGFGMNFQAVCDAQYRIVAWTMSCPGSQNDRTAFNFAWFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRP 159

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BLAST of mRNA_S-dermatodea_contig9212.17280.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 1.030e-25
Identity = 63/176 (35.80%), Postives = 93/176 (52.84%), Query Frame = 1

Query:   34 AMNQCKDLPVEWPKTGGELSSSGVMK---------ISIGAGDGILIRRKKPNKDEYIAPARFFYWHKMAVGLNMQAICGSSYIC---------SSPSRATAQHERQDCV------GPYVVTGYAAYGPSEKIIVPYPGIGLQCYTDAYNYYQSQSRMAIEQAFGILVRTWGILWRP 489
            A+NQ ++    WP+    L   GV +         + +GA DG+ +   +P+   ++ P  F+  HK   G+N QA+C + Y           S   R   +H   + V      G Y+V G  AY  S++++VPYPG  L    D+YN+YQSQ+R+ IEQAFG +V+TWGILWRP
Sbjct:   78 AINQTREFDCVWPEGDDALDQCGVYRQRSTNNVIHMCVGAMDGLFVLIFEPSLRRHVNPRGFYSGHKKGFGMNFQAVCNARYKITAWTMNCPGSCNDRTAFKHSGFERVLKTLPKGAYIV-GDGAYPASDQVLVPYPGTTLTPSQDSYNFYQSQARIFIEQAFGNMVKTWGILWRP 252

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BLAST of mRNA_S-dermatodea_contig9212.17280.1 vs. uniprot
Match: A0A6H5JUE6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUE6_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 4.570e-19
Identity = 59/165 (35.76%), Postives = 83/165 (50.30%), Query Frame = 1

Query:   37 MNQCKDLPVEWPKTGGELSSSGVMKISIGAGDGILIRRKKPNKDEYIAPARFFYWHKMAVGLNMQAICGSSYICSSPSRATA----------QHERQDCVGP----YVVTGYAAYGPSEKIIVPYPGIGLQCYTDAYNYYQSQSRMAIEQAFGILVRTWGILWRP 489
            + +C     EW       S+ G +   + AGDG+ ++   P+  +      +F  +K   GLN+QA C ++Y   S S  +A          + E    V      Y + G AAY  S++++ PYPG  L    DAYN+Y SQ R+ IEQAFGILV  WGILWRP
Sbjct:  183 VEECARQAKEWEAK----STGGAISGCVAAGDGLFVKTIAPSPVDTPNVLSYFSGNKSGYGLNIQATCDANYRFCSMSAISAGATNDWTAWNRSELSRAVARLPPGYYMLGDAAYPLSDQLLTPYPGKLLPRDQDAYNFYLSQLRVKIEQAFGILVGQWGILWRP 343

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BLAST of mRNA_S-dermatodea_contig9212.17280.1 vs. uniprot
Match: A0A6H5JDE6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDE6_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 6.120e-19
Identity = 60/165 (36.36%), Postives = 81/165 (49.09%), Query Frame = 1

Query:   37 MNQCKDLPVEWPKTGGELSSSGVMKISIGAGDGILIRRKKPNKDEYIAPARFFYWHKMAVGLNMQAICGSSY-ICSSPSRATA---------QHERQDCVGP----YVVTGYAAYGPSEKIIVPYPGIGLQCYTDAYNYYQSQSRMAIEQAFGILVRTWGILWRP 489
            + +C     EW       S+ G     + AGDG+ ++   P          FF  HK   GLN+QA C ++Y  CS  + A           + E  D V      + + G AAY  S++++ PYPG  L    DA+N+Y SQ R+ IEQAFGILV  WGILWRP
Sbjct:  180 VEECTRQAREWEVK----STGGAFAGCVAAGDGLFVKTFAPTVVNTPNVLSFFSGHKNGYGLNIQATCDANYRFCSMSAIAAGSTNDWTAWNRSELSDSVARLPPGFYMLGDAAYPLSDQLLTPYPGKLLPRDQDAFNFYLSQLRVKIEQAFGILVGQWGILWRP 340

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BLAST of mRNA_S-dermatodea_contig9212.17280.1 vs. uniprot
Match: A0A6H5JEM6_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM6_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 4.290e-18
Identity = 52/147 (35.37%), Postives = 78/147 (53.06%), Query Frame = 1

Query:   91 SSSGVMKISIGAGDGILIRRKKPNKDEYIAPARFFYWHKMAVGLNMQAICGSSY-ICS----SP---------SRATAQHERQDCVGPYVVTGYAAYGPSEKIIVPYPGIGLQCYTDAYNYYQSQSRMAIEQAFGILVRTWGILWRP 489
            S+ G+    + A DG+ I+ + P   E      ++   K A G+N+QA+C + Y  C+    SP         +R++           + + G AAY   EK++ PYPG  L    D++N++ SQ R+ IEQ+FGILV TWGILWRP
Sbjct:  106 STDGIFSWVVAAVDGLFIKAEAPRAKETKNVIAYYPGSKSAYGINVQAMCTADYRFCAMSAISPGSTNDWVAWTRSSLAKAVARLPAGFHIIGDAAYPIGEKLLTPYPGRQLPAGEDSFNFHLSQLRVKIEQSFGILVSTWGILWRP 252

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BLAST of mRNA_S-dermatodea_contig9212.17280.1 vs. uniprot
Match: A0A6H5JWD7_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWD7_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 6.800e-18
Identity = 57/164 (34.76%), Postives = 81/164 (49.39%), Query Frame = 1

Query:   40 NQCKDLPVEWPKTGGELSSSGVMKISIGAGDGILIRRKKPNKDEYIAPARFFYWHKMAVGLNMQAICGSSYICSSPSRATA----------QHERQDCVGP----YVVTGYAAYGPSEKIIVPYPGIGLQCYTDAYNYYQSQSRMAIEQAFGILVRTWGILWRP 489
            + C     EW       S+ GV    + AGDG+ ++   P+  +      +F  +K   GLN+QA C ++Y   S S  +A          +    D V      Y V G AAY  S+ ++ PYPG  L    D++N++ SQ R+ IEQA+GILV  WGILWRP
Sbjct:   48 DDCARQAKEWEAK----STGGVFSGCVAAGDGLFVKTIAPSPVDTPNVLSYFSGNKSGYGLNIQATCDANYRFCSMSAISAGATNDWTAWNRSSLSDSVARLPPGYYVLGDAAYPLSDHLLTPYPGKLLPRDEDSFNFHLSQLRVKIEQAYGILVGQWGILWRP 207

[Close]

BLAST of mRNA_S-dermatodea_contig9212.17280.1 vs. uniprot
Match: A0A6H5JV75_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV75_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 1.110e-17
Identity = 55/164 (33.54%), Postives = 82/164 (50.00%), Query Frame = 1

Query:   40 NQCKDLPVEWPKTGGELSSSGVMKISIGAGDGILIRRKKPNKDEYIAPARFFYWHKMAVGLNMQAICGSSY-----ICSSPSRA---TAQHER------QDCVGPYVVTGYAAYGPSEKIIVPYPGIGLQCYTDAYNYYQSQSRMAIEQAFGILVRTWGILWRP 489
            ++C     EW     E S+ G  +  + AGDG+ ++   P          ++   K   G+N+QA C ++Y      C +P      TA +        ++    + + G AAY  S+ ++ PYPG GL    DA+N+Y SQ R+ IEQAFGILV  WGILW+P
Sbjct:  187 DECTRQAAEWE----EKSTGGAFQGVVAAGDGLFVKTLAPTALNTPNVLSYYSGSKCGYGVNVQATCDANYRFCSMSCIAPGSTNDWTAWNHSDLSTAVKNLPPGFYMLGDAAYPLSDHLLTPYPGRGLPLDKDAFNFYLSQLRVRIEQAFGILVGQWGILWKP 346

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig9212.17280.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig9212.17280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K3F2_9PHAE	1.190e-30	38.64	DDE Tnp4 domain-containing protein n=1 Tax=Ectocar...	[more]
A0A6H5L6B6_9PHAE	2.370e-28	40.34	DDE Tnp4 domain-containing protein n=3 Tax=Ectocar...	[more]
A0A6H5K6M2_9PHAE	5.100e-27	38.29	DDE Tnp4 domain-containing protein n=1 Tax=Ectocar...	[more]
A0A6H5KNF2_9PHAE	2.120e-26	41.26	DDE Tnp4 domain-containing protein n=2 Tax=Ectocar...	[more]
A0A6H5KCG0_9PHAE	1.030e-25	35.80	DDE Tnp4 domain-containing protein n=1 Tax=Ectocar...	[more]
A0A6H5JUE6_9PHAE	4.570e-19	35.76	DDE Tnp4 domain-containing protein n=3 Tax=Ectocar...	[more]
A0A6H5JDE6_9PHAE	6.120e-19	36.36	DDE Tnp4 domain-containing protein n=1 Tax=Ectocar...	[more]
A0A6H5JEM6_9PHAE	4.290e-18	35.37	DDE Tnp4 domain-containing protein (Fragment) n=1 ...	[more]
A0A6H5JWD7_9PHAE	6.800e-18	34.76	DDE Tnp4 domain-containing protein n=2 Tax=Ectocar...	[more]
A0A6H5JV75_9PHAE	1.110e-17	33.54	DDE Tnp4 domain-containing protein n=4 Tax=Ectocar...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig9212	contig	S-dermatodea_contig9212:821..5270 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	70.1
Seed ortholog evalue	1.1e-09
Seed eggNOG ortholog	159749.K0RRQ6
EggNOG free text desc.	nuclease activity
EggNOG OGs	KOG4585@1,KOG4585@2759
COG Functional cat.	B
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Hectar predicted targeting category	other localisation
Exons	3
Model size	490
Cds size	489
Stop	0
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig9212.17280.1	prot_S-dermatodea_contig9212.17280.1	Saccorhiza dermatodea SderLu1190fm monoicous	polypeptide	S-dermatodea_contig9212 821..5269 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622925394.395287-CDS-S-dermatodea_contig9212:820..1051	1622925394.395287-CDS-S-dermatodea_contig9212:820..1051	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig9212 821..1051 +
1694079904.0990987-CDS-S-dermatodea_contig9212:820..1051	1694079904.0990987-CDS-S-dermatodea_contig9212:820..1051	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig9212 821..1051 +
1622925394.4082973-CDS-S-dermatodea_contig9212:4646..4874	1622925394.4082973-CDS-S-dermatodea_contig9212:4646..4874	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig9212 4647..4874 +
1694079904.1183412-CDS-S-dermatodea_contig9212:4646..4874	1694079904.1183412-CDS-S-dermatodea_contig9212:4646..4874	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig9212 4647..4874 +
1622925394.418615-CDS-S-dermatodea_contig9212:5239..5269	1622925394.418615-CDS-S-dermatodea_contig9212:5239..5269	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig9212 5240..5269 +
1694079904.131193-CDS-S-dermatodea_contig9212:5239..5269	1694079904.131193-CDS-S-dermatodea_contig9212:5239..5269	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig9212 5240..5269 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at S-dermatodea_contig9212:821..5270+
coding sequence from alignment at S-dermatodea_contig9212:821..5270+

protein sequence of mRNA_S-dermatodea_contig9212.17280.1

>prot_S-dermatodea_contig9212.17280.1 ID=prot_S-dermatodea_contig9212.17280.1|Name=mRNA_S-dermatodea_contig9212.17280.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=163bp
GRPTPRSGSRCAMNQCKDLPVEWPKTGGELSSSGVMKISIGAGDGILIRR
KKPNKDEYIAPARFFYWHKMAVGLNMQAICGSSYICSSPSRATAQHERQD
CVGPYVVTGYAAYGPSEKIIVPYPGIGLQCYTDAYNYYQSQSRMAIEQAF
GILVRTWGILWRP

mRNA from alignment at S-dermatodea_contig9212:821..5270+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_S-dermatodea_contig9212.17280.1 ID=mRNA_S-dermatodea_contig9212.17280.1|Name=mRNA_S-dermatodea_contig9212.17280.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4450bp|location=Sequence derived from alignment at S-dermatodea_contig9212:821..5270+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GGACGGCCTACGCCAAGGTCTGGCTCGCGATGTGCGATGAACCAGTGCAA
GGACCTGCCTGTCGAATGGCCGAAGACAGGAGGAGAACTCAGCAGCTCCG
GCGTTATGAAGATCAGCATTGGAGCGGGCGATGGGATCTTGATTCGTCGG
AAGAAACCGAACAAGGACGAGTACATCGCACCGGCTCGGTTCTTCTATTG
GCACAAGATGGCTGTGGGGTTGAACATGCAGGTGTGTGAGATCGCCACTG
TACGATAAGGTGTTGACCCCTTGTGGGAGGCACCTGTAACCGGCCGTGTT
TTGGCGGCAGGTGTGATGTTTGTGCAGTAAGATTCGTATAGAAAAAATCT
TACAAAGAGCAGTATGTTTTATACACGCGTTCTTTTTATGTCATCATACT
TCATGTAAAGTGCGAGCCCACAGCAGTATTGAGTGCTACATTATCTATAC
CTACTGGCAGCAGTATCAGCAATATCGTACTACCGTACTACTGCGATATT
AATATATAATACAAGGGCTGCGCCGGAGGGGGCTAACGCCCCCTCGGCCC
CGCGCAAGGCAATCGAAGATACCGTATTCGAAGTCGAGGTTCGGTACCCA
AGGCGCGAAAATGTGCTTCCTTCCGAAAATAAATTGTTCAAATGTACTTG
TTGTATAGAGCTCTAAAGCTCTTCTAAATATCGCGGTGTACATCGTGACA
CTTGAAAATAGCTCCGAGATATTCTCCAAAGCATGCATCATACATACTTG
ACTCCAGGATTGTACACTTCCTACGTGACGTATAAGCTGTAGAACATGTA
TGTACAGAGCTATATCACACACACTCACTCCTCTGCAGCATGGGAGGCAC
TCACCAAACTCACCGCTGCAATATCTGCATTTTTACTCAATTGCGGGGAG
AAATGTGTCTCAGTCTAAAACGATGTGTATTATGTATGTATGTACAGTAT
CTCAAACTTGCATAATAAGTATGATCCAGAGCCAAACAGCTCTTTTGACA
GTTTTTTACAGCCAGCAAGCTGTGTTCTGCGTTATTATTTGCCAGGAGGA
GAAAAAAAGGGCCGGCCGCACCCAGAAAAAACATCAAACCCTGCTGCTCC
TGTTCGTAGTTTGTCCTTTCAAAGGGCCGTAGCCGGGGCGTTCGGAGGGC
GCTACGCACACATCCAAGCTTCCACCCCCAAGCTCAGGACATTGCAGAGG
GGGCATGCATGTGGTTCGGAGGCTCTATCTCTCCGGTACCTTCTCCCCGA
GCCGAAACAAATCTAGTTGTACGCAGAGATCCACCGTCTACAATACATTG
CTGTAATATACTGTACTATGGGTGTATGTTGTTTATGTAGTACCGAGCGT
AAGTTTGACAACAAATAATTTGCAATCAATCAATCAATTGAGCTACAATG
TAGAGCTCTACACTTGTACATATATGTACAGCAGCAGAGTCAATCAATTT
TTCTTCTCGTTTACTGAACGAAAGATCTATGAACGGCGCCCGGGGGGGTC
CCTTGGCGAGAACCACGCACGCAACGGCGCCCCCACGGCCAAGCGCTGGA
AATGAGAGGAGACGCATGTCTCTTTTTCGCATTCCCCGGTGCCGTGTGTC
GCTCCCACCAAATGCAAACGATACATACATGCACACGCGTGGTGCGAGAG
TGAAAAGGTGAAAAAAACGATCTGCTGCAGATTTGTTTTTGCGCATCATA
ATATAATGTTGTTTATGTATGCGCAGAGCATAAGTGTGACGATCAATTTT
TTGCAATCAATCCATCAATAAAGCTACAATGTAGAGCTCTACACTTGTAC
ATGCATGTACAGCAGCAGCAGCGTCAGTCAATTTTCCTTCTCGTTTACTG
AACGAACGATCTGTGAACGGCGCTCGGTGGTTCGGTTGGCGAGAACCACG
CACGCAGCGGTGCCTCCACGGCCAAGCACTGGAAGTGAGAGGAGACACAT
ACATGTCTCTTTTTCACATTCCCCGGTGCCGTGTGTCGCTCCCGCCAAAT
GCAAATGATACATGCACACGCGTGGTGCGAGAGTGAAAAGGTGAAATAAA
CGATCTGCTGCAGATTTGTTTTTGAGCAACATGTCACACACAACAACAGC
AGGACGGAGCTCGGAGAACGTAGGATTCCGAAATGCTGTGTTATCCGAGC
CCTCAGGATCGAACAAACAACATGCGAAATTTCGTTTCTAGGCGGAAAGA
GCCTAGTCAACTCTAGTTTCGAGAATTTTTTTATTTTATTTTAAACTGCC
ACAGCACGAAGGCCTGACAGCGCTGTATTCCCAAATACTGCGTTTTCCGA
AGCCCCGAGGCTCGATATATATTATAGATAGGTTTATTGGTACACTCAGC
AGCGATCCCACCACACCAGCACAAACTGTACTGCTACGTGCATGTGTAGA
TTATATTCAGCGGCTTCTTCACCCCTCCTAAACTCTTGTAGAAGCAGTGG
AGGCGCTTCCCACGCCATAACAATGGGTGCAGTTGAAGTTGACGTGAGAA
ATCGTTGGATCGAATGTCTGTGATATCGTGACAGGAGTATTAGGGGCCGG
CGTCAAGCGTACTTTATACCGTAGTGTTTGGTACCTGGTATATATCTCAA
GATATTTCCCGCCTCTCTGGTGCTTCCAGAAAAGATTGTGCGACCTGCAT
CCCTTTACTGGCCGGCCCTATAGCAGCAGAAGTTGGGGAAATCATGTATT
TGTAGGGCTTTGAGTCGGCTCCGACTTTAATCAGACAAGCTGGTTCGTCG
GAAAGTTAGTTAGTAGGCTCCGAGCAGCCCGAGTGATAAAGCGTTTTTTC
AGTTGGGAATTTCCTAGGTCCTGGTATGGCCTTTAGCATGCGGGTTGCGT
TAGAAGTGCTTGTGCTGCGCACTGCGTACGCGGCGCCCCACTGCCGTTGA
TTAGCTAGAGCCTCTCCCAGACCCCAGCGCCGGTGACAGCAGTGCTGCCG
CCACCGTGATAACTGCCTCTTCGATTCCCGCCCCCGTTAGCGTGAAGGCC
GCGGAACTGAAAGCCAAGCTCTCGAGGCTCGAAAACGAGAGGCGAAAGAG
CCAACCTAGCAGCAGCTCGAGTACCGCCTGGCTATACTTCGAAGTCTATA
TGAACGCTTTGTTGGGTGGCATCGCCATCTGCTTGGATTATGTTTTTTTT
CCTTTTAACTCAGCACTACGGTCGAACCCAGCCTACTTTGCATCGTAACT
TTCAAGCATTTTTATATGGAAAGTGTAGCCAAATCGCGGATTTTTGTTCT
CCTCCAGCGGGGCCCCGTACCAGCCGGTGGGCCGTTGCGGCGCCGCCTCT
ATTTGCTCCCTCAACTAGTTAAGCTTGCTACGCCAGCCGACTCACAGCCC
CATGTCTTTGACAAACTATATTAATGCACTGGTTTCAGGCGCAGCCATTT
GTTCCCCTGTCTTATAAAACTAAAATAACTAAAGAGACGACACCTGAAGC
GATGTCAAGGTAAATCGAAAATCAACTGAAAGCCCTAGGAGACATCGCTC
TGGGATATTCGCCAATGTGGCTTGCCCTAGGACAGCCTGCGGCAGCTACC
GTGCGGCATCGCTGGGATATGCCCATGCAGATGTGCACTTGGCTGCTTGA
CCCCGTCCCGTTTCGCCTGTCGTTTCCTCCACCTGATGTCCGAAGCGCCG
AAGCATACCAAACACATATGTCCGTGGAGAGTACTTGCTTGTCGGTAACT
GACCTGTTATTCTGCGCCTACTTGAGGTCTTCGACAAATCACGGCTGTGC
TCTGTATTCTCGGCCATGTGTCTGCTCTAACCTACTTCCCTCCCTCTCTG
CGCCGCGGGTACTTAAATACAACCAGGCGATCTGCGGCTCGAGTTATATA
TGTTCATCGCCGTCTCGTGCAACTGCCCAACACGAACGACAGGACTGCGT
GGGGCCGTACGTGGTCACGGGTTATGCTGCGTACGGTCCCTCAGAGAAGA
TTATCGTGCCGTACCCAGGAATCGGCCTCCAGTGCTACACCGACGCATAC
AACTACTATCAGTCGCAGTCGAGGATGGCCATCGAGCAAGCGTTCGGGAT
ACTGGTGAGGTTTGACAGCGGGTGCTGCCGAAGTTTTTTCCCAAAGGTGC
TTTGTGTGGTGGGTTTCTCGTAGTATGATGTGTACGCTATTTACACATCT
CCGTTTTATCTTGCGTCGATGGCATCGGGGCCATGTACTGGAAGCAAACT
TACTTTACTTGTTAGAGCCGGCGAAGAATCCAACAGTCATCCTGTAATTC
CACATTAAGATAACCCGACAAAATTTCAAGTCCTGATGGGAATAAATGAG
CTGCGCATGACACTATCCATCGGAAGTTGGCTTCTTGGTGGGCCCAGCTT
TAATTGATGCAAACTTCCTGTGTCGCCGTCTTGGGATCAATGCCCCCCCT
GCTCATCGGAAATGTACAGGTTCGCACGTGGGGAATCCTGTGGAGGCCCC

Coding sequence (CDS) from alignment at S-dermatodea_contig9212:821..5270+

>mRNA_S-dermatodea_contig9212.17280.1 ID=mRNA_S-dermatodea_contig9212.17280.1|Name=mRNA_S-dermatodea_contig9212.17280.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=978bp|location=Sequence derived from alignment at S-dermatodea_contig9212:821..5270+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GGACGGCCTACGCCAAGGTCTGGCTCGCGATGTGCGATGAACCAGTGCAA
GGACCTGCCTGTCGAATGGCCGAAGACAGGAGGAGAACTCAGCAGCTCCG
GCGTTATGAAGATCAGCATTGGAGCGGGCGATGGGATCTTGATTCGTCGG
AAGAAACCGAACAAGGACGAGTACATCGCACCGGCTCGGTTCTTCTATTG
GCACAAGATGGCTGTGGGGTTGAACATGCAGGGACGGCCTACGCCAAGGT
CTGGCTCGCGATGTGCGATGAACCAGTGCAAGGACCTGCCTGTCGAATGG
CCGAAGACAGGAGGAGAACTCAGCAGCTCCGGCGTTATGAAGATCAGCAT
TGGAGCGGGCGATGGGATCTTGATTCGTCGGAAGAAACCGAACAAGGACG
AGTACATCGCACCGGCTCGGTTCTTCTATTGGCACAAGATGGCTGTGGGG
TTGAACATGCAGGCGATCTGCGGCTCGAGTTATATATGTTCATCGCCGTC
TCGTGCAACTGCCCAACACGAACGACAGGACTGCGTGGGGCCGTACGTGG
TCACGGGTTATGCTGCGTACGGTCCCTCAGAGAAGATTATCGTGCCGTAC
CCAGGAATCGGCCTCCAGTGCTACACCGACGCATACAACTACTATCAGTC
GCAGTCGAGGATGGCCATCGAGCAAGCGTTCGGGATACTGGCGATCTGCG
GCTCGAGTTATATATGTTCATCGCCGTCTCGTGCAACTGCCCAACACGAA
CGACAGGACTGCGTGGGGCCGTACGTGGTCACGGGTTATGCTGCGTACGG
TCCCTCAGAGAAGATTATCGTGCCGTACCCAGGAATCGGCCTCCAGTGCT
ACACCGACGCATACAACTACTATCAGTCGCAGTCGAGGATGGCCATCGAG
CAAGCGTTCGGGATACTGGTTCGCACGTGGGGAATCCTGTGGAGGCCCGT
TCGCACGTGGGGAATCCTGTGGAGGCCC