mRNA_S-dermatodea_contig9211.17279.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9211.17279.1
Unique NamemRNA_S-dermatodea_contig9211.17279.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig9211.17279.1 vs. uniprot
Match: D8LQW6_ECTSI (Beta-glucosidase, family GH1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW6_ECTSI)

HSP 1 Score: 305 bits (780), Expect = 1.460e-98
Identity = 153/218 (70.18%), Postives = 164/218 (75.23%), Query Frame = 1 
Query:   55 VIIEFLTTGRYRYWVPFLSSVRYTDPRAPKANDFIGLNYYSHYYASVWNVIFERETEEKLLALPAETMTDMPHCIYPEGLYCALKTMCAIGHPVYVTENGIADADDTRRSKQSINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDKYQLTNQSMRLYLKRYLYALSRAIKDGCDVHGYFYWSLYDNFEWCEAGFEPRFGLYKVDFDTQQRTLRDSSK 708
            VIIEFL TGRYR+WVPF +SVR+TD RAPKANDF+GLNYYSHYYAS+WNVIFE + EEKL ALPAETMTDMPHCIYPEGLYCALK M AIGHP+YVTENGIADADDTRR     N                                    +Q  RLYLKRYLYALSRAIKDGCDV GYFYWSLYDNFEWCE G+ PRFGLY+VDFDTQ+RTLRDSSK
Sbjct:  206 VIIEFLKTGRYRWWVPFCASVRFTDGRAPKANDFVGLNYYSHYYASLWNVIFEPDMEEKLRALPAETMTDMPHCIYPEGLYCALKAMSAIGHPIYVTENGIADADDTRRRWVLSNRHSENTVRPDQQVGSATENQANRGSRPK--------DQIRRLYLKRYLYALSRAIKDGCDVRGYFYWSLYDNFEWCE-GYGPRFGLYEVDFDTQRRTLRDSSK 414
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BLAST of mRNA_S-dermatodea_contig9211.17279.1 vs. uniprot
Match: A0A836CK19_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK19_9STRA)

HSP 1 Score: 229 bits (585), Expect = 2.860e-71
Identity = 116/216 (53.70%), Postives = 137/216 (63.43%), Query Frame = 1 
Query:   58 IIEFLTTGRYRYWVPFLSSVRYTDPRAPKANDFIGLNYYSHYYASVWNVIFERETEEKLLALPAETMTDMPHCIYPEGLYCALKTMCAIGHPVYVTENGIADADDTRRSKQSINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDKYQLTNQSMRLYLKRYLYALSRAIKDGCDVHGYFYWSLYDNFEWCEAGFEPRFGLYKVDFDTQQRTLRDSS 705
            II FL TG++R+WVPF + V Y D RAP ANDFIGLNYYSHYY S+WN+I E   E KL+ALP E MTDMP C+YPEGLY ALKTM  +G P+ VTENGIAD  D RR                                               LY++RYLYALSRAI+DG DV GY+YWSLYDNFEWCE G+  +FGLY V+FDTQ+R+LR ++
Sbjct:  147 IINFLRTGKFRFWVPFAACVSYMDSRAPAANDFIGLNYYSHYYVSLWNIITEPVLEAKLMALPQEIMTDMPQCVYPEGLYSALKTMATLGKPIIVTENGIADKHDDRRY----------------------------------------------LYIRRYLYALSRAIQDGVDVIGYYYWSLYDNFEWCE-GYHMKFGLYAVNFDTQERSLRPAA 315
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BLAST of mRNA_S-dermatodea_contig9211.17279.1 vs. uniprot
Match: A0A6H5KT44_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT44_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 5.800e-61
Identity = 117/255 (45.88%), Postives = 144/255 (56.47%), Query Frame = 1 
Query:   52 KVIIEFLTTGRYRYWVPFLSSVRYTDPRAPKANDFIGLNYYSHYYASVWNVIFERETEEKLLALPAETMTDMPHCIYPEGLYCALKTMCAIGHPVYVTENGIADADDTRRS-------------------------KQSINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDKYQLTNQSMRLYL-------KRYLYALSRAIKDGCDVHGYFYWSLYDNFEWC----EAGFEPRFGLYKVDFDTQQRTLRDSSK 708
            +VIIEFL TGRYR+WVPF +SVR+TD RAPKANDF+GLNYYSHYYAS+W+VIFE + EEKL ALPAETMTDMPHCIYPEGLYCALK M  IGHP+YVTENGIADADDTRR                           +++                               D  + ++   R +        K  +  L RA +    +    + +     +      + G+ PRFGL++VDF TQ+RTLRDSSK
Sbjct:   13 QVIIEFLKTGRYRWWVPFCASVRFTDGRAPKANDFVGLNYYSHYYASLWSVIFEPDMEEKLRALPAETMTDMPHCIYPEGLYCALKAMSVIGHPIYVTENGIADADDTRRRCVAERPRGDNPNDQGNRTTSSYVTFTETLRLISEASKNLVAMDASNTIFDAKRLIGRKFADPTEASDMKHRPFDVAEGPGGKPMIECLLRARRSSSRLRNLRHGAGQAEGDRRGLPRQGGYGPRFGLFEVDFGTQRRTLRDSSK 267
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BLAST of mRNA_S-dermatodea_contig9211.17279.1 vs. uniprot
Match: A0A836CL70_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL70_9STRA)

HSP 1 Score: 204 bits (518), Expect = 1.260e-56
Identity = 107/210 (50.95%), Postives = 128/210 (60.95%), Query Frame = 1 
Query:   76 TGRYRYWVPFLSSVRYTDPRAPKANDFIGLNYYSHYYASVWNVIFERETEEKLLALPAETMTDMPHCIYPEGLYCALKTMCAIGHPVYVTENGIADADDTRRSKQSINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDKYQLTNQSMRLYLKRYLYALSRAIKDGCDVHGYFYWSLYDNFEWCEAGFEPRFGLYKVDFDTQQRTLRDSS 705
            T R +    F +SV YTD RAP ANDFIGLNYY+HYY S+WN++ E   E KL ALP E MTDMP C+YPEGLY ALKTM  +G P+ VTENGIAD  D RR                                               LY++RYLYALSRAI+DG DV GY+YWSLYD+FEWCE G+  +FGLY V+FDTQ+R+LR ++
Sbjct:  757 THRRKILGAFAASVSYTDSRAPAANDFIGLNYYNHYYVSLWNIMTEPVLEAKLKALPQEIMTDMPQCVYPEGLYSALKTMATLGKPIIVTENGIADKHDDRRY----------------------------------------------LYIRRYLYALSRAIQDGVDVIGYYYWSLYDSFEWCE-GYHMKFGLYAVNFDTQERSLRPAA 919
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BLAST of mRNA_S-dermatodea_contig9211.17279.1 vs. uniprot
Match: A0A7S4D568_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D568_HETAK)

HSP 1 Score: 192 bits (487), Expect = 8.390e-54
Identity = 98/218 (44.95%), Postives = 124/218 (56.88%), Query Frame = 1 
Query:   58 IIEFLTTGRYRYWVPFLSSVRYTDPRAPKANDFIGLNYYSHYYASVWNVIFER-ETEEKLLALPAETMTDMPHCIYPEGLYCALKTMCAIGHPVYVTENGIADADDTRRSKQSINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDKYQLTNQSMRLYLKRYLYALSRAIKDGCDVHGYFYWSLYDNFEWCEAGFEPRFGLYKVDFDTQQRTLRDSSK 708
            I++F  TG + +W PF S++ Y D  A   NDFIGLNYYSHY  SVW   F+    EEKL A+P E  TDMPH +YPEG Y AL+ +  +  P+ VTENGIAD DD+ R                                              ++Y+ RY+YA+S+AI +GCDV GYFYWSL DNFEW   G+ P+FGLY+VDF TQ+R LRD +K
Sbjct:  398 ILDFFRTGFFHHWAPFFSNIHYHDANATSCNDFIGLNYYSHYCVSVWRTFFQGVPDEEKLAAMPREIYTDMPHVMYPEGFYRALRELQTLNLPIIVTENGIADKDDSCR----------------------------------------------QMYIARYMYAMSKAIHNGCDVRGYFYWSLLDNFEW-SLGYGPKFGLYEVDFKTQERRLRDGAK 568
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BLAST of mRNA_S-dermatodea_contig9211.17279.1 vs. uniprot
Match: A0A0G4I1C0_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I1C0_9ALVE)

HSP 1 Score: 161 bits (408), Expect = 4.320e-43
Identity = 91/222 (40.99%), Postives = 127/222 (57.21%), Query Frame = 1 
Query:   58 IIEFLTTGRYRYWVPFLSSVRYTDPRAPKANDFIGLNYYSHYYASVWNVIFER-ETEEKLLALPAETMTDMPHCIYPEGLY-CALKTMCAI-GHPVYVTENGIADADDTRRSKQSINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDKYQLTNQSMRLYLKRYLYALSRAIKDGCDVHGYFYWSLYDNFEWCEAGFEPRFGLYKVDFDTQQ--RTLRDSSK 708
            I+ FL++GR+ + VPFL+ V +TD  AP  NDFIGLNYYS Y+ S+W+ +  +   E+ LL  P E   DMP+ ++ EGLY C ++    + G P+YVTE+G +D +D+ R+                                              L++ R+LYALS+AIKDG  V G++YWSL DNFEWCE G+  RFGLY+VDF++ +  RTLRD SK
Sbjct:  323 ILRFLSSGRFVFSVPFLTRVEWTDAGAPSCNDFIGLNYYSRYFLSIWHALTNKGPPEDSLLGAPKEVKMDMPYTMHAEGLYTCLVRLHKQLPGVPIYVTESGASDRNDSLRA----------------------------------------------LFIHRHLYALSKAIKDGVPVQGFYYWSLMDNFEWCE-GYSMRFGLYEVDFESAEKTRTLRDGSK 497
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BLAST of mRNA_S-dermatodea_contig9211.17279.1 vs. uniprot
Match: A0A3A0DJS8_9BACT (Glycoside hydrolase family 1 protein n=2 Tax=candidate division KSB1 bacterium TaxID=2172550 RepID=A0A3A0DJS8_9BACT)

HSP 1 Score: 155 bits (391), Expect = 5.700e-41
Identity = 87/218 (39.91%), Postives = 117/218 (53.67%), Query Frame = 1 
Query:   58 IIEFLTTGRYRYWVPFLSSVRYTDPRAPKANDFIGLNYYSHYYASV-WNVIFERETEEKLLALPAETMTDMPHCIYPEGLYCALKTMCAIGHPVYVTENGIADADDTRRSKQSINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDKYQLTNQSMRLYLKRYLYALSRAIKDGCDVHGYFYWSLYDNFEWCEAGFEPRFGLYKVDFDTQQRTLRDSSK 708
            I +F   G +++  P L  V + +  A +A DFIGLNYYSH++  + W    +R T       P + MTDMP  +YPEG Y A+K +  +  P+YVTENGIADA D RR                                               L+++RYLYALS+A+K G DV GYFYWSL DNFEW E G++ +FGLY+VDF TQ+R LR+ ++
Sbjct:  289 IFDFFNAGHFKFHTPGLVKVEHHNSAAVRALDFIGLNYYSHFHVKLKW----DRTTPFTFACPPNQIMTDMPFAVYPEGFYRAVKEISRLNAPIYVTENGIADAKDDRRE----------------------------------------------LFIRRYLYALSQALKAGEDVRGYFYWSLLDNFEWAE-GYDMKFGLYEVDFATQKRKLREGAR 455
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BLAST of mRNA_S-dermatodea_contig9211.17279.1 vs. uniprot
Match: A0A381P7K2_9ZZZZ (Thioredoxin domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381P7K2_9ZZZZ)

HSP 1 Score: 156 bits (394), Expect = 6.520e-41
Identity = 87/219 (39.73%), Postives = 120/219 (54.79%), Query Frame = 1 
Query:   61 IEFLTTGRYRYWVPFLSSVRYTDPRAPKANDFIGLNYYSHYYASVW---NVIFERETEEKLLALPAETMTDMPHCIYPEGLYCALKTMCAIGHPVYVTENGIADADDTRRSKQSINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDKYQLTNQSMRLYLKRYLYALSRAIKDGCDVHGYFYWSLYDNFEWCEAGFEPRFGLYKVDFDTQQRTLRDSSK 708
            + F  TG++R+++P ++ +   +P A  A DFIGLNYYS Y+       N  F  ET ++      +  TDMP+ IYPEG Y AL T+  +  P+YVTENGIADADD +R+                                              L+++RYLYA+ RAI D  D+ GYFYW+L DNFEW E G++ +FGLY+VDF TQ+RT+R+ SK
Sbjct:  217 VHFFNTGKFRFYLPGMADMTMENPDAAGALDFIGLNYYSRYHVKGQLDPNEPFIFETRQQ------DVQTDMPYPIYPEGFYRALHTISQLDRPIYVTENGIADADDDQRA----------------------------------------------LFIRRYLYAMHRAIHDSLDIRGYFYWTLMDNFEWSE-GYQMKFGLYEVDFTTQERTMREGSK 382
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BLAST of mRNA_S-dermatodea_contig9211.17279.1 vs. uniprot
Match: A0A813VFY1_9BILA (Hypothetical protein n=2 Tax=Adineta steineri TaxID=433720 RepID=A0A813VFY1_9BILA)

HSP 1 Score: 149 bits (376), Expect = 8.310e-41
Identity = 91/227 (40.09%), Postives = 116/227 (51.10%), Query Frame = 1 
Query:   58 IIEFLTTGRYRYWVPFLSSVRYTDPRAPKANDFIGLNYYSHYYA-------SVWNVIFERETEEKLLALPAETMTDMPHCIYPEGLY--CALKTMCAIGHPVYVTENGIADADDTRRSKQSINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDKYQLTNQSMRLYLKRYLYALSRAIKD-GCDVHGYFYWSLYDNFEWCEAGFEPRFGLYKVDFDTQQRTLRDSSK 708
            I++F  TG +++ +P      YT+ RAP  NDFIGLNYYSH+         S + ++  R+     L      MTDMP+ +YPEGLY  C          P+Y+TENGIAD  D RR                                               L+L+RYLYA+SRAI + GCD+ GYFYWSL DNFEW E G++ +FGLY VD  TQ+RTLRD SK
Sbjct:   61 ILDFFRTGCFKWTMPGTIHRTYTNSRAPYTNDFIGLNYYSHFLVRFNLFKPSFYEILHRRDDSGSAL------MTDMPYALYPEGLYRACVRLKNELPRLPIYITENGIADRFDDRR----------------------------------------------HLFLRRYLYAVSRAINEAGCDIRGYFYWSLTDNFEWAE-GYDMKFGLYHVDLQTQERTLRDGSK 234
[Close]
BLAST of mRNA_S-dermatodea_contig9211.17279.1 vs. uniprot
Match: A0A7C2TT33_9BACT (Glycosyl hydrolase family protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C2TT33_9BACT)

HSP 1 Score: 154 bits (389), Expect = 1.040e-40
Identity = 88/221 (39.82%), Postives = 121/221 (54.75%), Query Frame = 1 
Query:   58 IIEFLTTGRYRYWVPFLSSVRYTDPRAPKANDFIGLNYYSHYYASV-WNVIFERETEEKLLAL---PAETMTDMPHCIYPEGLYCALKTMCAIGHPVYVTENGIADADDTRRSKQSINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDKYQLTNQSMRLYLKRYLYALSRAIKDGCDVHGYFYWSLYDNFEWCEAGFEPRFGLYKVDFDTQQRTLRDSSK 708
            I++F  TG +++ +  ++  R+ +  A +A DFIGLNYYSH +    WN         +  AL   P E MTDM + IY EGLY A+KT+ ++  P+Y+TENGIADA D RR                                               L+ +RYL+AL++AIKDGCDV GYFYWSL DNFEW E G++ +FGLYK++F TQ+R LR  ++
Sbjct:  288 ILQFFKTGHFKFKISRMAEARHFNAGAQRAMDFIGLNYYSHLHVKFRWN-------PPQFFALTHRPDEIMTDMIYPIYAEGLYRAIKTVASLNVPIYITENGIADAKDDRRD----------------------------------------------LFFRRYLFALAQAIKDGCDVRGYFYWSLMDNFEWAE-GYDMKFGLYKMNFQTQERKLRKGAE 454
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9211.17279.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQW6_ECTSI1.460e-9870.18Beta-glucosidase, family GH1 n=1 Tax=Ectocarpus si... [more]
A0A836CK19_9STRA2.860e-7153.70Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A6H5KT44_9PHAE5.800e-6145.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CL70_9STRA1.260e-5650.95Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A7S4D568_HETAK8.390e-5444.95Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4I1C0_9ALVE4.320e-4340.99Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A3A0DJS8_9BACT5.700e-4139.91Glycoside hydrolase family 1 protein n=2 Tax=candi... [more]
A0A381P7K2_9ZZZZ6.520e-4139.73Thioredoxin domain-containing protein (Fragment) n... [more]
A0A813VFY1_9BILA8.310e-4140.09Hypothetical protein n=2 Tax=Adineta steineri TaxI... [more]
A0A7C2TT33_9BACT1.040e-4039.82Glycosyl hydrolase family protein n=1 Tax=bacteriu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9211contigS-dermatodea_contig9211:73..6540 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score307.0
Seed ortholog evalue7.7e-81
Seed eggNOG ortholog2880.D8LQW6
EggNOG free text desc.beta-glucosidase activity
EggNOG OGsCOG2723@1,KOG0626@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionBeta-glucosidase, family GH1
Ec32 orthologEc-07_001850.1
Exons5
Model size711
Cds size711
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9211.17279.1prot_S-dermatodea_contig9211.17279.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9211 73..6540 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925394.3110414-CDS-S-dermatodea_contig9211:72..2481622925394.3110414-CDS-S-dermatodea_contig9211:72..248Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9211 73..248 +
1694079904.038405-CDS-S-dermatodea_contig9211:72..2481694079904.038405-CDS-S-dermatodea_contig9211:72..248Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9211 73..248 +
1622925394.3244648-CDS-S-dermatodea_contig9211:2650..28571622925394.3244648-CDS-S-dermatodea_contig9211:2650..2857Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9211 2651..2857 +
1694079904.0547254-CDS-S-dermatodea_contig9211:2650..28571694079904.0547254-CDS-S-dermatodea_contig9211:2650..2857Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9211 2651..2857 +
1622925394.3407593-CDS-S-dermatodea_contig9211:3606..37441622925394.3407593-CDS-S-dermatodea_contig9211:3606..3744Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9211 3607..3744 +
1694079904.0645413-CDS-S-dermatodea_contig9211:3606..37441694079904.0645413-CDS-S-dermatodea_contig9211:3606..3744Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9211 3607..3744 +
1622925394.354423-CDS-S-dermatodea_contig9211:3818..39281622925394.354423-CDS-S-dermatodea_contig9211:3818..3928Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9211 3819..3928 +
1694079904.0749896-CDS-S-dermatodea_contig9211:3818..39281694079904.0749896-CDS-S-dermatodea_contig9211:3818..3928Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9211 3819..3928 +
1622925394.365029-CDS-S-dermatodea_contig9211:6460..65401622925394.365029-CDS-S-dermatodea_contig9211:6460..6540Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9211 6461..6540 +
1694079904.0872617-CDS-S-dermatodea_contig9211:6460..65401694079904.0872617-CDS-S-dermatodea_contig9211:6460..6540Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9211 6461..6540 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9211.17279.1

>prot_S-dermatodea_contig9211.17279.1 ID=prot_S-dermatodea_contig9211.17279.1|Name=mRNA_S-dermatodea_contig9211.17279.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=237bp
PPPPPCCFSSCLVIRSGKVIIEFLTTGRYRYWVPFLSSVRYTDPRAPKAN
DFIGLNYYSHYYASVWNVIFERETEEKLLALPAETMTDMPHCIYPEGLYC
ALKTMCAIGHPVYVTENGIADADDTRRSKQSINQSINQSTNQSINQSINQ
SINQSINQSINQCDKYQLTNQSMRLYLKRYLYALSRAIKDGCDVHGYFYW
SLYDNFEWCEAGFEPRFGLYKVDFDTQQRTLRDSSK*
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mRNA from alignment at S-dermatodea_contig9211:73..6540+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9211.17279.1 ID=mRNA_S-dermatodea_contig9211.17279.1|Name=mRNA_S-dermatodea_contig9211.17279.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6468bp|location=Sequence derived from alignment at S-dermatodea_contig9211:73..6540+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CCACCGCCGCCCCCCTGCTGCTTTTCGTCCTGCCTTGTGATACGCTCCGG
AAAGGTCATTATTGAGTTCTTAACGACCGGTCGGTATCGATATTGGGTGC
CGTTTCTGTCCTCGGTGCGCTACACGGACCCGCGGGCGCCGAAGGCCAAC
GACTTTATCGGTCTGAATTACTACAGGTATTTGTTTTTTTGCTGAAAGTG
ACGATGGAGGCGACGGGGGCTCGCCGTTTGTTTCGCCCTTGTCGAAACCT
ACAAACACGGAAATGTTGATGCTCGTGTTCATGTTTGTTTCCGTCGTTTG
AATTTGTTTGTTTGTTTTTCAACATTGGCCTCACGCAGGATATTTTGTTA
GTGTATGCACGCGTATGGCCGACCGGCTTTATGCGGCCAGACTTGTGTCC
AGATGCGCAAAGCGTCAAGGATAAACTTTTCTACTGTCTGTTGAAGTTTA
TCATAAATCTATTGCTACAATGCACACTACCATCCCTGGCACTTGTTATT
GCACAAGAAAGAAGAAACAGTTACCCCAGCGATAGGGAAACGCCAGAAGA
GTAGTACATAAAATACAACCCTATGGTACGTAACGTCAGGACGGCAGTAA
GTACGGGGAGGACCTATTCGTCGCGCAAGCATTTATTGTGCGAAAATACG
CTCTGGAGCATATACAGTATGTGAAAAATACAACAAAGTCATCTCATCGA
CTGTCCGAAAACGAACAAGCTACGTATATGCGCATGAGTAGATTTCCGAT
GGTAAACAATATAAGAGAAAGGCGCACCAAGCCTTTTGCTATTCATCTAA
TTATCAGTGTAATAGTGCACCAGCCACCCTGAAGAGCTATAGTCGGCCGC
CAGAAGCAACGTCTCGTCGGGGTACCCATTATTTGACTGTGTATCATTTT
CGCAGTTGTTTTGGCGAGCACCGCCACGCTCAGCGCCTCGCCCCGCCCGC
CCACCCACCCGCCCACCCACCCCCTCTACACCGAGACGGTNNNNNNNNNN
TGCCACCAAAAACACTTTTTCTTCGGTGTACCCTTTTTTTGTCTTTGTTT
CATTTTCTCAGTTTTTTTTGCCCCCCCCCCCCCCCCCCCCCCCCTCCCCA
CGGCTTTCATCCAAATAGCGTCCACGTTTTTATGTTGTTCAGAGGCGTGC
GGCAACTCTGCTGAAATGTAGTTACGTGCTTCTTTCGTGTGCTTCTGCTG
AATATTATATTACTAGTAGTTTCTTGCTTCTTGCCTACGGTTCTGCTGAT
TTGTATTCATTTTGTCCTTTCAGATAGTCATGATAACTACTTTTCCGTTG
TTCGCTATGGCGTGATCACGGGTCTGGTCCTAACGCTCGTTTTTACACGC
ACACAAACCGACGCACAAACGCAGCAAGTACGTACGTCCACACCAAGCGA
CGCACAAATGCTCGTCAAAATGCCCACACAAGCCAGCGAATGCGCTCGAA
ATTACACGCGAAAACGCTCCTATTAATATGTACACCTAGACTAACCGACC
AAGAGCACTTGTAAAACGCACGCACAGAAACCGACGTAAAACACTCGTCC
AAATGCCCACAGAAGCCGGCGGAAAACGCTAGTAAAGACACGCACACAAG
TCCAAAAAAACACCCGCATTGACACCCACCCAAACCGGCGAAACATTCGT
AAAGCGCACGCCTATAAACCAATGCAAACGCTCGTCAGAAATGCCCGCAC
AAGCCTACGGAAAACGCTCGTAAATTGACGAGAACAAACTGGCGCAAACG
CTCGTCAAGATCCTCACACAAGCCGACGCTAAAACGCTCGTAAGTACACC
TGCACGTACCGACCAACACGCCTGTAAAACAGACGCACATAAAGCAACTC
AAAACGCCCGTCAAAGTTCCCCATAGAATCCCAAGGGCAACGCGCGTAAA
TTCGCGACCATATACCGACGGAGACGTTTGTAGCTACATGTACACAGACT
CGCAATGATGGCAAGGACACCCACACAAACCGATGCACAAACGCTCGTAA
CTGCACTCGACCAACCGCGCACAAACGTGTCAAAATGCCCACACAAGCCG
ACGCAAAACGTTTTTAAACGCACCCACACGAACCGACGCAAAAACGCTCG
CAAAGACACACCCCTCCACACACACCGACCACAAAAAACACACTCGTAGA
ACACACGCACACAAGGCAACGCAAAACGCTCGTCAAAATTCTCCACAGAC
GCGCCGACGGAAAAACACGCTGAAATTCACGAGCATAGAGCGGCGCCGGC
TTAAATTCACGCAGACGAACGTCACAACGCTATCAAGTACACCGACACAA
ACCGATGGACGAACGAACGCTCGTCAAAATGCCCACACCAGCCGCGACGC
GAAACGCTCGTTTTCGCGCGGACGCTAACGGACGACAAAACGCTCGTATG
TACAAAAGCACACAAACAGGCGCAAAAACCCTCGTAGAATCCACCCAGCC
ACGCAAACCGACGCCAAACACCGACGAACGCACTCACACTCACAAAAGCC
GACGAAAATCACTCAAAAACGCACAAACGCAAAAACGCAAAAACGCAAAA
ACGTGCGACGCAAAAACGTGCGACGCAGCCACTACTACGCTTCTGTGTGG
AACGTGATCTTCGAGCGGGAGACAGAAGAGAAGCTCCTGGCGCTGCCCGC
CGAGACGATGACGGACATGCCGCACTGCATCTACCCGGAGGGGCTGTACT
GCGCCCTGAAGACCATGTGCGCCATCGGGCACCCGGTGTACGTGACGGAG
AACGGTATCGCGGATGCCGACGACACTCGTCGAAGGTGGGGGGGGGGGGC
GGGGGGAGGGGGGGGGGGGGGCTAGGCTCTTCTCTTTGTGGTATTTTTGG
TGGTGTTTTTTGTTTTTTTTTCCCCTTTAGCAAAAACCATGGGTGTATTG
CGGGGGGTATACAGAGCAGTAAGCATGATGATATTTCTGTTCAATGCGGC
GTGTTCAAGGTTTGTTTTAAACGTCGGCTCAAACACCTTTAATTTTAATT
TTTTATTTTATTGACACTTCAGGCTGAAAGAGAAATCAGACGTTGTAAGA
CCGGGCCGTATTAATTTATGGTACCACGGTATATTATATTGGGTATACTG
TTTTAGCACATTGGGTCCTGCCTCCTACTACTGTCTCTACCTTAATAGCC
AATTTTTATGTAATCATGCAAACCCTTGTGGAGCTGAGCCTGCTTTCAGG
GTTAGGCCAACTGTCCACGCACCGTGTTTCATTCACTTCGGAAGGCGTCT
CCTCCTCGCGGCAGTAACGGCCTTGGAGGAGGGATGACAACCCTAGCGTG
TCACGTTTAGGGTGCGCGCACGGCGGTGTGGTACACTTGTTGCGCATCCA
CCCGAATGTCCGCGTTGATGATATTCCGTTATGTTTTTTACGATCTCGCG
ATTTCTCATCTGACCACGAGAGCGGGATGGGCCCGAGCAGGTTCGGTTGT
AAGAGTGACCATCAACCAATCAATCAATCAATCAATCAATCAATCAATCA
TTCAATCAATCAATCAATCAATCAATCAATCAAGCAAGCAATCAATCAAT
CAATCAATCAATCAATCAACCAACCAATCAATCAATCAATCAATCAATCA
ATCAATCAATCAATCAATCAATCAATCAATCAATCAATGCGATAAATATC
AATTAACCAATCAATCGATGCGGTAAACCTGTGAGCGCCTCCGACTTGTC
TGCTTTCCCACCTGCCTTTGCCTCCGGTTTTGTCCACGGCGCCCAGGCTT
TACCTCAAGAGATACCTGTACGCCCTGTCAAGGGCCATCAAGGACGGCTG
CGACGTGCACGGTTACTTCTACTGGTCTCTGTACGACAACTTCGAGTGGT
GTGAAGGTAGGCCGAGCTCGTAAAAAGCAACACGCCTGTTGCATCATGTA
CACAACTTTTGGAAACGTTCAAGAAATGTTCTAGCCTCACGTAGCGGTCA
GGCCGCACGTGGGTAAGAGCCGCGTAGGGCTATGACAGATATAGACAGTA
GTCAAGACCTAATGTGCCTATTACTAACAGTATACCCAACATAATGTACA
TCATATATAAACCTGATTTGGCCTCATCATACAAATATCTGCGAAAATTT
TCCGGCCTGAAACGTCCATTAAAAAAAGTTGTTTTCTTGCAAGGCCCTCT
GGGGAACGTTTCAAAAGAGAGCCTTAAAAACGCCTCTATACTGAGCAGAA
GCTTGGTACTGGTGATTATTTGCAAAAACCTTCAAAAATATTCCTGCCTG
AAACTTTCACTTAAAAAAGAAACACATTTTATTGCAAGGTCCTGTGGGGA
ACGTTTCAGAAGAGAGACGTGAGAACGCCTCTATATTGAGCAGAAACTTG
GTCCTGATTGCTGTGTGCCCCCGTTCTAACGCCAAGTGCTTTAGGAATAC
TCAAAATAGCACACTTAACTGGCCACCTTTTATTTCACACGAAAAATTCG
GCCTAAGGCTATTCTCCGGTATATTGTGAACGGGTCGGTACCATTAATAC
TGCTGTATGTACATTGGTGCGTCTGATTGCTCAGGACGCTGAAGCTCGCT
CCGTGGTTGAAATGTCAACACCGCGCGCCTACGATTTGATTCCCTGCGGA
ACACCCCCACGCGTGGGTGCGTGCCAACCCGCCCGCCCCCAGCGTTTGCT
TGTACAAGTATTTTGAACCGTGCTTGTTACATAGGGGACCATTGTTTCCG
TTTCTTTTTTTTTTAGCAGGCCCAATTTTCCGACGTGAGACACTGGGTAT
TGATTGGTTGATTGATTGATGGATTGATTGACGGACTGATTATCACACTT
GCAAGCGACCGGCCCACCAATGGTTACCGATCCCGCTATCTCGTGGTCAG
ATGAAAAAAAAAAACAAGAAAAAGAGAGAAAAAACCCCACGGAAGTACCA
ATGTAGTACATACAAAGAAGGTACTGACACAAAACTCTCGGAAACAGAAG
TGGGGAGGGGGAGGGTACCTTTGTGAATTCGCTTATTTTCGAGTGTTTGT
TTGTATTTTGCACTTTTTTTGGCGACATGTTGGCGCTGCTTTGGCAATGT
TTCGCGTTTTTCAGCGTTAGTTTTGCGTTTCTCAAGGGGACTACGGTCAT
GTGCGTGACACGAATTGATGACGATGATGAACGAGCGGGTGCGGGGGGGG
GGCGAAGAGGCTCGCAAGTTCTGCGCGAGCCACCATTTAGGTTCGCTAGC
ACGTGACACCGAGCCGCCCCTCACGACGTGATTGGGACTAGATCACACCC
TGGACAAATATCAAGTACATTCTTTTGGCAAGGTGTGCAGCTAATTTGTT
CACGAGCAAATACAACTTGGAAAAGCAGTGCAACTCAGTTACTTTAAAGG
AAATACCAGTATTTGCTCCACTACACATATACCCGGGAGCAAAATATTTC
CAAAATAATGGTTTTCCACTCCGAATTCGGTCGGGAGCAAGTGACTTGCA
TACCTGTTCAACTCCGTATATATTGCAAAGCAGAACACGAGTTGCGCTAC
GTTGACACTCAGTATTTGGTCGGGGACGCAGTAAGTTGCACTGCTTTTAT
CTGCCGTATCGTGTACATTCGGGGCGTCGCGAAACCTCTGGACACGAAGC
AATCCGGGCAAGTATTCGTAGAGTTCCCGTACATACCGCATGCCTCGACA
GCGGGACGTTTGCGGCAGCCGTGGACATCTCCCGAACGATGACTCGAGAA
AGCCGTGCGAGTGCTGAACGAATGGACTCAATGATGCATGAAGGCCAAGA
CAAAAAACCAGTAAAGACGTGGTCTTGCACCAGGGATGAAGAGAGATCGG
TCGATGGATCATTCCCTCCCATTGCGACCACGGACGGGGTTCGGGGAAGG
GTAGATGTATCTACGCACAGCACACATCTACTCACATACATAGGCATAGG
CATAGGCATAGGCATACACATATACATAGACATAGATATAGACATACGCA
CACATAAACAGACGTACACGCACATATACACACACATACATACGCACGTG
GACATATACACATACATATACATACACACGTGCAGGTGCAGCCGCGCCTG
ACCCGCGTTTTTCACGATCCGTTTCCGTGTGCTTTTTTTGGCCCGCGCCT
CATTGCTGTTGCGGCACACGCCTCGTCCCTCCCCGTAAAAAATCAATGAT
TTCACCCCTCCTGAAGACAATGAGGATTTACGAACACAGAACCAGCACTG
AGGTCCAACTAATATTTTGGTAGAGGAAAAAAGATGGCCCAACCAATCTA
ACTCAGTGGAAGCCTACATTATATACGATGCTATCGATGCTATCGTGTCA
CATTCAAATCAAGAGGTAACTATAGGAATGCCCCCCCCCCCCCCGCCCCC
CTCCCCCCCGCCCTGTGGATATTGTGGGGGTGTACGAGCAGGGTTTGAGC
CTCGCTTCGGGCTGTACAAGGTGGACTTCGACACGCAACAGCGGACACTA
CGCGACAGCTCCAAGTGA
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Coding sequence (CDS) from alignment at S-dermatodea_contig9211:73..6540+

>mRNA_S-dermatodea_contig9211.17279.1 ID=mRNA_S-dermatodea_contig9211.17279.1|Name=mRNA_S-dermatodea_contig9211.17279.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1422bp|location=Sequence derived from alignment at S-dermatodea_contig9211:73..6540+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CCACCGCCGCCCCCCTGCTGCTTTTCGTCCTGCCTTGTGATACGCTCCGG
AAAGGTCATTATTGAGTTCTTAACGACCGGTCGGTATCGATATTGGGTGC
CGTTTCTGTCCTCGGTGCGCTACACGGACCCGCGGGCGCCGAAGGCCAAC
GACTTTATCGGTCTGAATTACTACAGCCACCGCCGCCCCCCTGCTGCTTT
TCGTCCTGCCTTGTGATACGCTCCGGAAAGGTCATTATTGAGTTCTTAAC
GACCGGTCGGTATCGATATTGGGTGCCGTTTCTGTCCTCGGTGCGCTACA
CGGACCCGCGGGCGCCGAAGGCCAACGACTTTATCGGTCTGAATTACTAC
AGCCACTACTACGCTTCTGTGTGGAACGTGATCTTCGAGCGGGAGACAGA
AGAGAAGCTCCTGGCGCTGCCCGCCGAGACGATGACGGACATGCCGCACT
GCATCTACCCGGAGGGGCTGTACTGCGCCCTGAAGACCATGTGCGCCATC
GGGCACCCGGTGTACGTGACGGAGAACGGTATCGCGGATGCCGACGACAC
TCGTCGAAGCCACTACTACGCTTCTGTGTGGAACGTGATCTTCGAGCGGG
AGACAGAAGAGAAGCTCCTGGCGCTGCCCGCCGAGACGATGACGGACATG
CCGCACTGCATCTACCCGGAGGGGCTGTACTGCGCCCTGAAGACCATGTG
CGCCATCGGGCACCCGGTGTACGTGACGGAGAACGGTATCGCGGATGCCG
ACGACACTCGTCGAAGCAAGCAATCAATCAATCAATCAATCAATCAATCA
ACCAACCAATCAATCAATCAATCAATCAATCAATCAATCAATCAATCAAT
CAATCAATCAATCAATCAATGCGATAAATATCAATTAACCAATCAATCGA
TGCGCAAGCAATCAATCAATCAATCAATCAATCAATCAACCAACCAATCA
ATCAATCAATCAATCAATCAATCAATCAATCAATCAATCAATCAATCAAT
CAATCAATGCGATAAATATCAATTAACCAATCAATCGATGCGGCTTTACC
TCAAGAGATACCTGTACGCCCTGTCAAGGGCCATCAAGGACGGCTGCGAC
GTGCACGGTTACTTCTACTGGTCTCTGTACGACAACTTCGAGTGGTGTGA
AGGCTTTACCTCAAGAGATACCTGTACGCCCTGTCAAGGGCCATCAAGGA
CGGCTGCGACGTGCACGGTTACTTCTACTGGTCTCTGTACGACAACTTCG
AGTGGTGTGAAGCAGGGTTTGAGCCTCGCTTCGGGCTGTACAAGGTGGAC
TTCGACACGCAACAGCGGACACTACGCGACAGCTCCAAGTGACAGGGTTT
GAGCCTCGCTTCGGGCTGTACAAGGTGGACTTCGACACGCAACAGCGGAC
ACTACGCGACAGCTCCAAGTGA
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