prot_S-dermatodea_contig12826.1727.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12826.1727.1
Unique Nameprot_S-dermatodea_contig12826.1727.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length120
Homology
BLAST of mRNA_S-dermatodea_contig12826.1727.1 vs. uniprot
Match: A0A6H5KE64_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KE64_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 9.720e-44
Identity = 98/129 (75.97%), Postives = 101/129 (78.29%), Query Frame = 0
Query:    1 MGPFRGTPAAVATALVLAAFSAPP---VAFVGGFVVPASSSAIARSTRGVSDVIVSATSPVRRA------GRASTALQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVS 120
            MGPFR TP AVA AL LAA S+P    V  VGGFVVP S+S IARST G    IVSA S VRR+      G  STALQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVS
Sbjct:    1 MGPFRSTPVAVAAALALAASSSPSSGIVTLVGGFVVPPSASTIARSTPGAG--IVSAQSHVRRSPSWRTSGGPSTALQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVS 127          
BLAST of mRNA_S-dermatodea_contig12826.1727.1 vs. uniprot
Match: W7TN53_9STRA (Membrane-associated 30 kDa protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN53_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 2.350e-19
Identity = 46/54 (85.19%), Postives = 50/54 (92.59%), Query Frame = 0
Query:   67 ALQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVS 120
            A+QMNLADRF RV KANLN++LQ  EDPEKILEQAVEDMQKDL+KIRQSYAEVS
Sbjct:   55 AVQMNLADRFFRVVKANLNSVLQNLEDPEKILEQAVEDMQKDLIKIRQSYAEVS 108          
BLAST of mRNA_S-dermatodea_contig12826.1727.1 vs. uniprot
Match: A0A7S2H6D6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H6D6_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.220e-18
Identity = 45/62 (72.58%), Postives = 54/62 (87.10%), Query Frame = 0
Query:   59 RRAGRASTALQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVS 120
            R + R+STAL MNL DRF RVAKAN+NNIL++ EDPEKI+ QAVEDMQ DLVK+RQSYAE++
Sbjct:   43 RSSSRSSTALSMNLFDRFSRVAKANVNNILKSLEDPEKIMNQAVEDMQADLVKVRQSYAEIT 104          
BLAST of mRNA_S-dermatodea_contig12826.1727.1 vs. uniprot
Match: A0A836CIH9_9STRA (PspA/IM30 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIH9_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 2.170e-18
Identity = 53/90 (58.89%), Postives = 67/90 (74.44%), Query Frame = 0
Query:   31 FVVPASSSAIARSTRGVSDVIVSATSPVRRAGRASTALQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVS 120
            F+ P++SS+   + R V+     A SPV       +  QMNLADRF+RVAKANLN++LQ  EDPEK+LEQAV+DMQ+DLVK+RQSYAEVS
Sbjct:   23 FIAPSASSSFTGTGRVVA---YRAASPVHL-----STTQMNLADRFMRVAKANLNSLLQKVEDPEKVLEQAVDDMQRDLVKVRQSYAEVS 104          
BLAST of mRNA_S-dermatodea_contig12826.1727.1 vs. uniprot
Match: A0A1Z5KB53_FISSO (Phage shock protein A n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KB53_FISSO)

HSP 1 Score: 87.4 bits (215), Expect = 2.760e-18
Identity = 45/56 (80.36%), Postives = 50/56 (89.29%), Query Frame = 0
Query:   65 STALQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVS 120
            STALQMNL DRF RVAK+NLNNIL+  EDPEKI+ QAVEDMQKDLV +RQSYAEV+
Sbjct:   37 STALQMNLFDRFTRVAKSNLNNILKNLEDPEKIMTQAVEDMQKDLVSVRQSYAEVT 92          
BLAST of mRNA_S-dermatodea_contig12826.1727.1 vs. uniprot
Match: A0A7S2XXS6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXS6_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 3.360e-18
Identity = 45/61 (73.77%), Postives = 51/61 (83.61%), Query Frame = 0
Query:   60 RAGRASTALQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVS 120
            R+ R  T L MN+ADRF+RVAKAN+NN+L   EDPEKILEQAV DMQKDLV +RQSYAEVS
Sbjct:   69 RSVRFDTGLHMNMADRFMRVAKANINNMLSKVEDPEKILEQAVLDMQKDLVNVRQSYAEVS 129          
BLAST of mRNA_S-dermatodea_contig12826.1727.1 vs. uniprot
Match: A0A7S3K4X7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4X7_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 8.420e-18
Identity = 46/72 (63.89%), Postives = 54/72 (75.00%), Query Frame = 0
Query:   48 SDVIVSATSPVRRAGRASTALQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEV 119
            S +I S+T  VR        + MN+ DRF RVAKAN+NN+L  WEDPEK+L QAVED+QKDLVKIRQSYAEV
Sbjct:   28 SKLITSSTKFVRSQYTQRGVVSMNIFDRFSRVAKANINNVLNKWEDPEKVLNQAVEDLQKDLVKIRQSYAEV 99          
BLAST of mRNA_S-dermatodea_contig12826.1727.1 vs. uniprot
Match: B7FWP5_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FWP5_PHATC)

HSP 1 Score: 85.9 bits (211), Expect = 1.380e-17
Identity = 45/62 (72.58%), Postives = 51/62 (82.26%), Query Frame = 0
Query:   59 RRAGRASTALQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVS 120
            R A  +S+ L MNL DRF RVAK+NLNNILQ  EDPEKI+ QAVEDMQ DLVK+RQSYAEV+
Sbjct:   45 RAASTSSSTLHMNLFDRFQRVAKSNLNNILQNLEDPEKIMNQAVEDMQADLVKVRQSYAEVT 106          
BLAST of mRNA_S-dermatodea_contig12826.1727.1 vs. uniprot
Match: A0A7S3L6Z1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6Z1_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.840e-17
Identity = 43/56 (76.79%), Postives = 50/56 (89.29%), Query Frame = 0
Query:   65 STALQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVS 120
            STAL MNL DRF RVAK+NLNN+L+  EDPEKI+ QA+EDMQKDLVK+RQSYAEV+
Sbjct:   46 STALHMNLFDRFSRVAKSNLNNVLKNLEDPEKIMTQALEDMQKDLVKVRQSYAEVT 101          
BLAST of mRNA_S-dermatodea_contig12826.1727.1 vs. uniprot
Match: A0A7S1D0V6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D0V6_CYCTE)

HSP 1 Score: 85.1 bits (209), Expect = 2.650e-17
Identity = 44/64 (68.75%), Postives = 52/64 (81.25%), Query Frame = 0
Query:   57 PVRRAGRASTALQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVS 120
            P R A   +TAL MN+ DRF RVAKAN+NNIL+  EDPEKIL QA+EDMQ DLVK+RQSYAE++
Sbjct:   45 PRRAATATTTALNMNIFDRFSRVAKANINNILKNLEDPEKILNQALEDMQGDLVKVRQSYAEIT 108          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12826.1727.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KE64_9PHAE9.720e-4475.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TN53_9STRA2.350e-1985.19Membrane-associated 30 kDa protein n=2 Tax=Monodop... [more]
A0A7S2H6D6_9STRA1.220e-1872.58Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A836CIH9_9STRA2.170e-1858.89PspA/IM30 family-domain-containing protein n=1 Tax... [more]
A0A1Z5KB53_FISSO2.760e-1880.36Phage shock protein A n=2 Tax=Fistulifera solaris ... [more]
A0A7S2XXS6_9STRA3.360e-1873.77Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S3K4X7_9STRA8.420e-1863.89Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
B7FWP5_PHATC1.380e-1772.58Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A7S3L6Z1_9STRA1.840e-1776.79Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S1D0V6_CYCTE2.650e-1768.75Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007157PspA/IM30PFAMPF04012PspA_IM30coord: 74..119
e-value: 2.4E-12
score: 46.9
IPR007157PspA/IM30PANTHERPTHR31088FAMILY NOT NAMEDcoord: 33..119
NoneNo IPR availablePANTHERPTHR31088:SF6MEMBRANE-ASSOCIATED PROTEIN VIPP1, CHLOROPLASTICcoord: 33..119
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..38
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 39..120
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..38
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12826contigS-dermatodea_contig12826:144..2362 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12826.1727.1mRNA_S-dermatodea_contig12826.1727.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12826 144..2371 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12826.1727.1 ID=prot_S-dermatodea_contig12826.1727.1|Name=mRNA_S-dermatodea_contig12826.1727.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=120bp
MGPFRGTPAAVATALVLAAFSAPPVAFVGGFVVPASSSAIARSTRGVSDV
IVSATSPVRRAGRASTALQMNLADRFLRVAKANLNNILQTWEDPEKILEQ
AVEDMQKDLVKIRQSYAEVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007157PspA_IM30