mRNA_S-dermatodea_contig92.17264.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
|
Overview
Homology
BLAST of mRNA_S-dermatodea_contig92.17264.1 vs. uniprot
Match: D7FQL5_ECTSI (Glucose-6-phosphate 1-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQL5_ECTSI) HSP 1 Score: 489 bits (1258), Expect = 1.540e-170 Identity = 247/317 (77.92%), Postives = 266/317 (83.91%), Query Frame = 1
Query: 70 MQFVSLVSLGFLGLQLNAVSAFVAVPAASGRGWNMRSGATSSSSSALGATEGTNEGGLKKLTISSGEAEAEVFTLGGCVTSFKALDYDYLFVRPDAKMDGSKPISGGLPHCFPQFGPGEIQQHGFGRNLEWAVTGTTDSSVSLKLSDNDETMAMWPHPFECTYTVELNGATLETELAVTNTGSSAFDFQAALHSYFRCSDINKVTISSPQLDGASYLNKMKDPPATESFSGNKMTISEETDQVFKGVSGDILIDDAGNSRKLTVSNTGGWTDTVVWNPYGNAGMGADNFVCVESAKIEGGKLAAGETWTGTMKLLPA 1020
M +L + GFLGLQL V+ F VP + NMRS + A ATEGTNE GLKKLTISSG+A AEVFTLGGCVTSFK DYDYLFVRPDA MDGSKPISGGLPHCFPQFGPG IQQHGFGRNLEW V G+TD SVSLKLSDN+ETMAMWPHPFEC Y V L+G TL+TELAVTNTGS FDFQAALHSYFRCSDINKVTISSP+LDGASYLNKMKDPPATE+FSG KMTISEE DQVFKGV+GD+ I+DAGNSR L VSNT GW DTV+WNPYGN GMGADNFVCVESA++ G KLAAG+TWTG MKLLPA
Sbjct: 1 MHSTTLAAFGFLGLQLTDVAGFH-VPVPVQQAHNMRS------TPARMATEGTNESGLKKLTISSGDASAEVFTLGGCVTSFKVKDYDYLFVRPDAMMDGSKPISGGLPHCFPQFGPGVIQQHGFGRNLEWEVVGSTDDSVSLKLSDNEETMAMWPHPFECVYKVALDGTTLQTELAVTNTGSEDFDFQAALHSYFRCSDINKVTISSPKLDGASYLNKMKDPPATETFSGTKMTISEEVDQVFKGVTGDVSINDAGNSRVLVVSNTEGWADTVIWNPYGNEGMGADNFVCVESAQVGGEKLAAGKTWTGKMKLLPA 310
BLAST of mRNA_S-dermatodea_contig92.17264.1 vs. uniprot
Match: A0A835YNN9_9STRA (Glucose-6-phosphate 1-epimerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNN9_9STRA) HSP 1 Score: 299 bits (766), Expect = 1.100e-95 Identity = 143/266 (53.76%), Postives = 187/266 (70.30%), Query Frame = 1
Query: 235 GGLKKLTISSGEA-EAEVFTLGGCVTSFKALDYDYLFVRPDAKMDGSKPISGGLPHCFPQFGPGEIQQHGFGRNLEWAVTGT---TDSSVSLKLSDNDETMAMWPHPFECTYTVELNGATLETELAVTNTGSSAFDFQAALHSYFRCSDINKVTISSPQLDGASYLNKMKDPPATESFSGNKMTISEETDQVFKGVSGDILIDDAGNSRKLTVSNTGGWTDTVVWNPYGNAGMGADNFVCVESAKIEGGKLAAGETWTGTMKLLPA 1020
G L+K+ +++ EAE++TLG CVTSF YD LFVRPDAK+DGSKPISGGLPHCFPQFGPG+IQQHGF RNLEW + + SV+LKL++N+ET+AMWPH F+C YTV L+ + L T L + NTG+SAFDFQ ALHSYFR D+ + T+ + ASYL+K PPA ++S +TIS+ D VF GVSG++ ++DA RKL + N G+ DT++W+P+G+ MG NF+CVES K+ L GE W G M L P+
Sbjct: 64 GPLRKILLNTSTGCEAEIYTLGACVTSFTVDGYDSLFVRPDAKLDGSKPISGGLPHCFPQFGPGKIQQHGFARNLEWELESSRPGASPSVTLKLTENEETLAMWPHKFQCLYTVTLSSSILCTTLKIKNTGNSAFDFQTALHSYFRTGDVEQTTVKNGAFLFASYLDKTASPPADSTWSTGDITISKPVDYVFSGVSGEVTVEDAAARRKLKIKNLAGYEDTIIWSPFGDDNMGYKNFICVESGKVTPQVLQPGEEWVGKMDLSPS 329
BLAST of mRNA_S-dermatodea_contig92.17264.1 vs. uniprot
Match: A0A7S2CQS8_9EUKA (Glucose-6-phosphate 1-epimerase n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2CQS8_9EUKA) HSP 1 Score: 298 bits (763), Expect = 2.240e-95 Identity = 146/264 (55.30%), Postives = 184/264 (69.70%), Query Frame = 1
Query: 232 EGGLKKLTISSGEAE-AEVFTLGGCVTSFKALDYDYLFVRPDAKMDGSKPISGGLPHCFPQFGPGEIQQHGFGRNLEWAVTGTTDSSVSLKLSDNDETMAMWPHPFECTYTVELNGATLETELAVTNTGSSAFDFQAALHSYFRCSDINKVTISSPQLDGASYLNKMKDPPATESFSGNKMTISEETDQVFKGVSGDILIDDAGNSRKLTVSNTGGWTDTVVWNPYGNAGMGADNFVCVESAKIEGGK-LAAGETWTGTMKLLP 1017
E L+ +T+++ + A + G CVTS+ D L VRPDAKMDGSKPISGG+PHCFPQFGPG +QQHGF RNL+W VT T +SV L ++D T+AMWPH FE YTV L L TE VTNTG SAFDF AALHSY+ + + + ISSP +GA+YL+KM+ PPA + S + +TIS ETD V+KGVSGD+++ D+G R LT+SN GW+DTV+WNPYGN MG D+FVCVESA+ L E WTG M ++P
Sbjct: 58 ESALRTITLTNAAGDSATAYPFGACVTSYIKNGVDVLMVRPDAKMDGSKPISGGIPHCFPQFGPGAMQQHGFARNLDWDVTEQTATSVVFSLKESDYTLAMWPHAFEAKYTVILTDDALRTEFTVTNTGDSAFDFTAALHSYWSITGVGNIKISSPAFEGATYLDKMQSPPADVTSSSSDITISAETDSVYKGVSGDVVLADSGRPRPLTISNQLGWSDTVLWNPYGNKDMGFDSFVCVESAQFATPVILQPSEYWTGAMDVVP 321
BLAST of mRNA_S-dermatodea_contig92.17264.1 vs. uniprot
Match: A0A7S3VW40_9SPIT (Glucose-6-phosphate 1-epimerase n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3VW40_9SPIT) HSP 1 Score: 286 bits (733), Expect = 1.690e-91 Identity = 141/263 (53.61%), Postives = 180/263 (68.44%), Query Frame = 1
Query: 241 LKKLTISSGEAEAEVFTLGGCVTSFKALDYDYLFVRPDAKMDGSKPISGGLPHCFPQFGPGEIQQHGFGRNLEWAVTGTTDS---SVSLKLSDNDETMAMWPHPFECTYTVELNGATLETELAVTNTGSSAFDFQAALHSYFRCSDINKVTISSPQLDGASYLNKMKDPPATESFSGNKMTISEETDQVFKGVSGDILIDDAGNSRKLTVSNTGGWTDTVVWNPYGNAGMGADNFVCVESAK-IEGGKLAAGETWTGTMKLLP 1017
L +T+ +G++ A+++ G CVTS+ D L VRPDAKMDGSKPISGG+PHCFPQFGPGEIQQHGF RNL W V D + LKL+ +D T MW FE TYTV L +L +L V NTGSSAFDF ALH+Y+ S I I+ GA++LNKM DPPA ++ ++ I+EETD V+KGV+GD++I+D+G RK+ + TGGW DTV+WNPYGN GMG D+FVCVE AK + LA ETWT +M ++P
Sbjct: 12 LPFVTLETGDSSAKIYLFGACVTSYVKDGKDCLMVRPDAKMDGSKPISGGIPHCFPQFGPGEIQQHGFARNLPWVVDSLADGVEPKLVLKLTPSDYTKGMWDKEFEATYTVTLKEDSLICDLGVKNTGSSAFDFTTALHTYWSISSIKNAKITG-DFQGATFLNKMLDPPAEQTCESGEIVITEETDSVYKGVTGDVVIEDSGIGRKINIKATGGWEDTVLWNPYGNEGMGYDSFVCVECAKALSPVNLAPAETWTASMSVVP 273
BLAST of mRNA_S-dermatodea_contig92.17264.1 vs. uniprot
Match: A0A7S4CW58_9EUGL (Glucose-6-phosphate 1-epimerase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CW58_9EUGL) HSP 1 Score: 280 bits (717), Expect = 1.110e-86 Identity = 153/285 (53.68%), Postives = 195/285 (68.42%), Query Frame = 1
Query: 205 ALGATEGT---------NEGGLK--KLTISSGEAEAEVFTLGGCVTSF-KALDYDYLFVRPDAKMDGSKPISGGLPHCFPQFGPGEIQQHGFGRNLEWAVTGTTDSSVSLKLSDNDETMAMWPHPFECTYTVELNGATLETELAVTNTGSS-AFDFQAALHSYFRCSDINKVTISSPQLDGASYLNKMKDPPATESFSGNKMTISEETDQVFKGVSGDILIDDAGNSRKLTVSNTGGWTDTVVWNPYGNAGMGADNFVCVESAKIEGGKLAAGETWTGTMKLLPA 1020
AL AT GT +EGGL+ +LT SG A A+VFT G VTS+ A +++ VRPDAKMDGSKPISGGL HCFPQFGPG IQQHGF RN++W V ++SSV+ +L+ +D T AMW PF+C +TV L L+TEL V NTGS+ AFDFQAALHSYF S I ++ G ++LNKM DPPA + +++TI+EE D+V+ GV+ D ++ D+G ++L + N+ GW DTV+WNPYGN GMG DNFVCVES +L AGE W GTM L+PA
Sbjct: 172 ALAATTGTKVGEGVLKVDEGGLEYAELTHPSG-ASAKVFTYGADVTSYVDASGTEWIAVRPDAKMDGSKPISGGLSHCFPQFGPGAIQQHGFARNVDWTVHSISESSVTYELTPSDYTRAMWDKPFKCLFTVTLKEDCLDTELVVENTGSAEAFDFQAALHSYFDISSIKNTSVGG-SFSGKTFLNKMLDPPAEQVEERSEITIAEEYDRVYAGVN-DPVLKDSGKGKQLKIVNSAGWKDTVLWNPYGNEGMGYDNFVCVESVAFTPVQLGAGEKWVGTMSLVPA 453
BLAST of mRNA_S-dermatodea_contig92.17264.1 vs. uniprot
Match: A0A7S3JU04_9STRA (Glucose-6-phosphate 1-epimerase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JU04_9STRA) HSP 1 Score: 275 bits (703), Expect = 1.390e-86 Identity = 144/265 (54.34%), Postives = 188/265 (70.94%), Query Frame = 1
Query: 235 GGLKKLTIS--SGEAEAEVFTLGGCVTSF-KALDYDYLFVRPDAKMDGSKPISGGLPHCFPQFGPGEIQQHGFGRNLEWAVTGTTDSSVSLKLSDNDETMAMWPHPFECTYTVELNGATLETELAVTNTGS-SAFDFQAALHSYFRCSDINKVTISSPQLDGASYLNKMKDPPATESFSGNKMTISEETDQVFKGVSGDILIDDAGNSRKLTVSNTGGWTDTVVWNPYGNAGMGADNFVCVESAKIEGGKLAAGETWTGTMKLLP 1017
GGL+ + + SG A A+VF G VTS+ A +++ VRPDAKMDGSKPISGGL HCFPQFGPGEIQQHGF RNL+W + GT DSSV+++L NDET AMW +PF CT+ V + +L+T+L V N G +AFDFQAALHSYF S I +TIS DG+SYL+K +PPAT + + +++I+EE D+V+KGV+ +LID +G +KL +SN G+ DTV+W+PYGN MG + FVCVES + L GE+W G M L+P
Sbjct: 40 GGLRYVLLKHPSG-ASAKVFPYGADVTSYIDASGTEWIAVRPDAKMDGSKPISGGLSHCFPQFGPGEIQQHGFARNLDWTIIGTGDSSVTMELKANDETRAMWDYPFLCTFEVSVTADSLDTKLLVKNIGEDAAFDFQAALHSYFDISSIGSITISG-SFDGSSYLDKTANPPATCTEARKEISIAEEYDRVYKGVNDPVLID-SGKGKKLQISNKAGYLDTVLWSPYGNDAMGYEKFVCVESVAFDPIHLEPGESWLGDMSLIP 301
BLAST of mRNA_S-dermatodea_contig92.17264.1 vs. uniprot
Match: A0A7S4CW14_9EUGL (Glucose-6-phosphate 1-epimerase (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CW14_9EUGL) HSP 1 Score: 279 bits (713), Expect = 8.280e-84 Identity = 152/284 (53.52%), Postives = 194/284 (68.31%), Query Frame = 1
Query: 205 ALGATEGT---------NEGGLK--KLTISSGEAEAEVFTLGGCVTSF-KALDYDYLFVRPDAKMDGSKPISGGLPHCFPQFGPGEIQQHGFGRNLEWAVTGTTDSSVSLKLSDNDETMAMWPHPFECTYTVELNGATLETELAVTNTGSS-AFDFQAALHSYFRCSDINKVTISSPQLDGASYLNKMKDPPATESFSGNKMTISEETDQVFKGVSGDILIDDAGNSRKLTVSNTGGWTDTVVWNPYGNAGMGADNFVCVESAKIEGGKLAAGETWTGTMKLLP 1017
AL AT GT +EGGL+ +LT SG A A+VFT G VTS+ A +++ VRPDAKMDGSKPISGGL HCFPQFGPG IQQHGF RN++W V ++SSV+ +L+ +D T AMW PF+C +TV L L+TEL V NTGS+ AFDFQAALHSYF S I ++ G ++LNKM DPPA + +++TI+EE D+V+ GV+ D ++ D+G ++L + N+ GW DTV+WNPYGN GMG DNFVCVES +L AGE W GTM L+P
Sbjct: 172 ALAATTGTKVGEGVLKVDEGGLEYAELTHPSG-ASAKVFTYGADVTSYVDASGTEWIAVRPDAKMDGSKPISGGLSHCFPQFGPGAIQQHGFARNVDWTVHSISESSVTYELTPSDYTRAMWDKPFKCLFTVTLKEDCLDTELVVENTGSAEAFDFQAALHSYFDISSIKNTSVGG-SFSGKTFLNKMLDPPAEQVEERSEITIAEEYDRVYAGVN-DPVLKDSGKGKQLKIVNSAGWKDTVLWNPYGNEGMGYDNFVCVESVAFTPVQLGAGEKWVGTMSLVP 452
BLAST of mRNA_S-dermatodea_contig92.17264.1 vs. uniprot
Match: A0A6V2TXV1_EMIHU (Glucose-6-phosphate 1-epimerase n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A6V2TXV1_EMIHU) HSP 1 Score: 266 bits (679), Expect = 5.120e-83 Identity = 130/264 (49.24%), Postives = 179/264 (67.80%), Query Frame = 1
Query: 232 EGGLKKLTISSGEAEA-EVFTLGGCVTSFKALDYDYLFVRPDAKMDGSKPISGGLPHCFPQFGPGEIQQHGFGRNLEWAVTGTTDSSVSLKLSDNDETMAMWPHPFECTYTVELNGATLETELAVTNTGSSAFDFQAALHSYFRCSDINKVTISSPQLDGASYLNKMKDPPATESFSGNKMTISEETDQVFKGVSGDILIDDAGNSRKLTVSNTGGWTDTVVWNPYGNAGMGADNFVCVESAKIEGG-KLAAGETWTGTMKLLP 1017
E LK +++S+ ++ V+T G C+TS+ D L VRPDAK+DGSKPISGG+P C+PQFGPG IQQHGF RNL+W V +DS V ++L+++ TM MWPH F+ Y+V L L T+ VTNT S F ALH+Y+ C DI+KV I +P GA+YL+KM+ PPA + + ++I D V+ GVSGD++++ A ++ LT+ N+ GW+DTVVW+PYG+ GMG NFVCVESA+ KL GE WTG M+++P
Sbjct: 39 ESALKTVSLSNAAGDSVTVYTFGACITSYVKGGTDVLAVRPDAKLDGSKPISGGIPFCWPQFGPGAIQQHGFARNLDWTVVEQSDSKVVMELTESAYTMDMWPHAFKLQYSVTLEDDRLATDFCVTNTDSKPLSFTGALHTYWSCDDIDKVAIKAPAFAGATYLDKMQSPPADVKSASDTISIGAPVDSVYAGVSGDVVLEGA-HASPLTIKNSVGWSDTVVWSPYGDEGMGYKNFVCVESAQAATPVKLEPGEYWTGAMEVVP 301
BLAST of mRNA_S-dermatodea_contig92.17264.1 vs. uniprot
Match: A0A6U5EVB5_9STRA (Glucose-6-phosphate 1-epimerase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5EVB5_9STRA) HSP 1 Score: 265 bits (678), Expect = 2.250e-82 Identity = 141/268 (52.61%), Postives = 183/268 (68.28%), Query Frame = 1
Query: 226 TNEGGLK--KLTISSGEAEAEVFTLGGCVTSF-KALDYDYLFVRPDAKMDGSKPISGGLPHCFPQFGPGEIQQHGFGRNLEWAVTGTTDSSVSLKLSDNDETMAMWPHPFECTYTVELNGATLETELAVTNTGSSAFDFQAALHSYFRCSDINKVTISSPQLDGASYLNKMK-DPPATESFSGNKMTISEETDQVFKGVSGDILIDDAGNSRKLTVSNTGGWTDTVVWNPYGNAGMGADNFVCVESAKIEGGKLAAGETWTGTMKLLP 1017
TNE GL+ KL S+G A +EV+ GG VTS+ A +++ VRPDAKMDGSKPISGGL HC+PQFGPGEIQQHGF RN+ WAV TD+SV L+++ +D T MW PF CT++V L L T++ V N G AFDFQAALHSYF S ++ + I +G +LNKM D ++ + +TI+EE D+V+ GV+ D +++D G +KL+V NT G+ DTV+WNPYGN GMG +NFVCVES K + L GE+WTG M L P
Sbjct: 70 TNEDGLEFVKLVNSAG-ASSEVYLFGGVVTSYVDAEGTEFIAVRPDAKMDGSKPISGGLSHCWPQFGPGEIQQHGFARNVNWAVKSMTDTSVELEMAPSDYTKEMWDKPFLCTFSVSLEEDQLSTKMFVENKGEEAFDFQAALHSYFTVSALDNLEIEG-SFEGKEFLNKMAGDEGEMQTETRGTITITEEYDRVYTGVN-DPVLNDKGTGKKLSVVNTAGYEDTVIWNPYGNEGMGYNNFVCVESVKFDPFTLGGGESWTGDMSLKP 334
BLAST of mRNA_S-dermatodea_contig92.17264.1 vs. uniprot
Match: A0A7S2NZU1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NZU1_9STRA) HSP 1 Score: 264 bits (674), Expect = 8.700e-82 Identity = 150/306 (49.02%), Postives = 194/306 (63.40%), Query Frame = 1
Query: 115 LNAVSAFVAVPAASGRGWNMRSGATSSSSSALGATEG--TNEGGLK--KLTISSGEAEAEVFTLGGCVTSFKALDYDYLFVRPDAKMDGSKPISGGLPHCFPQFGPGEIQQHGFGRNLEWAVTGTTDSSVSLKLSDNDETMAMWPHPFECTYTVELNGATLETELAVTNTGSSAFDFQAALHSYFRCSDINKVTISSPQLDGASYLNKMKDPPATESFSGNKMTISEETDQVFKGVSGDILIDDAGNSRKLTVSNTGGWTDTVVWNPYGNAGMGADNFVCVESAKIEGGKLAAGETWTGTMKLLPA 1020
LNA A A AAS R W GATS S+ A A+ G TN+ GL+ KL A ++V+ GG VTS+ +Y+ VRPDAK+DGSKPISGGL HC+PQFGPGEIQQHGF RN+ W V +D+SV L+++ +D T MW F CT+TVEL L T++ V N G AFDFQ+ALHSYF S + + I+ +G +LNKM D ++ +TI EE D+V+ GV+ D + D+G + L+V NT G+ DTV+WNPYGN GMG +NFVCVES K + L G +WTG M L P+
Sbjct: 33 LNASRA--AQKAASRRAWCEARGATSDSAVAEVASAGLMTNDEGLEYVKLVHPETGATSDVYLFGGVVTSYVVDGVEYVAVRPDAKVDGSKPISGGLSHCWPQFGPGEIQQHGFARNVNWEVKSMSDTSVVLEMAPSDYTKEMWDKEFLCTFTVELEADQLSTKMFVENKGEEAFDFQSALHSYFTVSSLENLEITG-SFEGKEFLNKMVDGGTMQTEDRAAITIGEEYDRVYMGVN-DPALKDSGTGKVLSVLNTAGYEDTVLWNPYGNEGMGYNNFVCVESVKFDAVTLEGGASWTGDMALKPS 334 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig92.17264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig92.17264.1 >prot_S-dermatodea_contig92.17264.1 ID=prot_S-dermatodea_contig92.17264.1|Name=mRNA_S-dermatodea_contig92.17264.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=318bp MQFVSLVSLGFLGLQLNAVSAFVAVPAASGRGWNMRSGATSSSSSALGATback to top mRNA from alignment at S-dermatodea_contig92:32134..41831+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig92.17264.1 ID=mRNA_S-dermatodea_contig92.17264.1|Name=mRNA_S-dermatodea_contig92.17264.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=9698bp|location=Sequence derived from alignment at S-dermatodea_contig92:32134..41831+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig92:32134..41831+ >mRNA_S-dermatodea_contig92.17264.1 ID=mRNA_S-dermatodea_contig92.17264.1|Name=mRNA_S-dermatodea_contig92.17264.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1908bp|location=Sequence derived from alignment at S-dermatodea_contig92:32134..41831+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |