prot_S-dermatodea_contig9086.17165.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig9086.17165.1
Unique Name	prot_S-dermatodea_contig9086.17165.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	144

Homology

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BLAST of mRNA_S-dermatodea_contig9086.17165.1 vs. uniprot
Match: A0A6H5L2B6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2B6_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 6.780e-62
Identity = 92/143 (64.34%), Postives = 113/143 (79.02%), Query Frame = 0

Query:    1 NIHKYCAFTTVVWGRGTFFIFVGTLALAQWEFMDIILGFYLVLLGAGMIYWGQEAYKKMDGLVAEMKMKDPETIQAMFRKFDHNSNGFLSLSELGELLRSLGADLRPTEIEAAFIHMDADNDGNINIDEFSGWWSRHDTASLV 143
             IHKYCAFTTVVWGRG FFIF+GTLALAQW F+ I+LG YLV++GAGMIYWGQEAYK +D L  EMK  +P  ++ MFRKFDHN++G L ++E+G LL SLGA +RPTE+EAA I MD DNDG I++ EF GWW+   +  +V
Sbjct:  121 KIHKYCAFTTVVWGRGAFFIFIGTLALAQWVFISIVLGLYLVIIGAGMIYWGQEAYKNLDALHGEMK--NPAVVEGMFRKFDHNNDGVLDVTEMGNLLESLGAMMRPTEVEAACIIMDTDNDGKISLAEFQGWWANSPSPEVV 261

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BLAST of mRNA_S-dermatodea_contig9086.17165.1 vs. uniprot
Match: A0A835YVM7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVM7_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.050e-18
Identity = 44/134 (32.84%), Postives = 75/134 (55.97%), Query Frame = 0

Query:    1 NIHKYCAFTTVVWGRGTFFIFVGTLALAQWEFMDIILGFYLVLLGAGMIYWGQEAYKKMDGLVAEMKMKDPETIQAMFRKFDHNSNGFLSLSELGELLRSLGADLRPTEIEAAFIHMDADNDGNINIDEFSGWW 134
             ++++  F T+VWGRG F+++VG+L    W+   ++LG    L+G  MI +G+ A  K+  +  +   +  + ++  F  FD N +  L  +EL  L R +GA L   E+E A + +D + +G I  DEF+ WW
Sbjct:  122 RVYEFARFLTLVWGRGIFYLYVGSLCFQVWDLPGVLLGSATCLIGLCMIVYGRSATVKLQYMQGQFTTE--KDLRRAFDAFDVNRSAALEPAELAALCREMGALLTRAELETALLMLDRNANGKIEFDEFAAWW 253

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BLAST of mRNA_S-dermatodea_contig9086.17165.1 vs. uniprot
Match: A0A7S2XB37_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XB37_9EUKA)

HSP 1 Score: 83.6 bits (205), Expect = 6.760e-17
Identity = 45/132 (34.09%), Postives = 76/132 (57.58%), Query Frame = 0

Query:    2 IHKYCAFTTVVWGRGTFFIFVGTLALAQWEFMDIILGFYLVLLGAGMIYWGQEAYKKMDGLVAEMKMKDPETIQAMFRKFDHNSNGFLSLSELGELLRSLGADLRPTEIEAAFIHMDADNDGNINIDEFSGW 133
            I K     T +WG+G F+IF+GTL L QW  + II+G Y++L+G  MI    ++ +K+  L  ++  +    ++  F+K+D + NG++S +E  +L R     L   E++AA   +D D +G I+ +EF  W
Sbjct:   91 IEKEFKILTRLWGKGIFYIFIGTLLLWQWGLIPIIVGSYMMLVGILMILISFQSGRKLGSLRQKLVAQTDMEVEEAFKKYDKDGNGWISDAEFKDLAREHEISLNANEMDAAKNILDTDRNGKIDKNEFRVW 222

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BLAST of mRNA_S-dermatodea_contig9086.17165.1 vs. uniprot
Match: A0A0L0FU12_9EUKA (EF-hand domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FU12_9EUKA)

HSP 1 Score: 80.5 bits (197), Expect = 5.150e-16
Identity = 50/138 (36.23%), Postives = 73/138 (52.90%), Query Frame = 0

Query:    8 FTTVVWGRGTFFIFVGTLALAQWEFMDIILGFYLVLLGAGMIYWGQEAYKKMDGLVAEMKMKDPETIQAMFRKFDHNSNGFLSLSELGELLRSLGADLRPTEIEAAFIH-----------MDADNDGNINIDEFSGWW 134
            F T + GR  F+IFVGTL LAQW +M ++ G  L+  G  M+  G  A KK++ L  EM   DP+ ++  F   D + NG L   E+  L  SLG  L   E+E A +            +D+++DG ++ +EF  WW
Sbjct:   58 FLTRLHGRAFFYIFVGTLMLAQWHWMQMMSGGLLIFTGIVMMISGGVANKKLNSLKREMT--DPQEVRENFYAHDLDGNGALDTKEVAALCASLGTVLSRVELERALMCPSNNSLTFQQLLDSNHDGMVSYEEFYNWW 193

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BLAST of mRNA_S-dermatodea_contig9086.17165.1 vs. uniprot
Match: A0A7S1XLD5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLD5_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.700e-15
Identity = 45/131 (34.35%), Postives = 69/131 (52.67%), Query Frame = 0

Query:   14 GRGTFFIFVGTLALAQWEFM-DIILGFYLVLLGAGMIYWGQEAYKKMDGLVAEMKMKDPETIQAMFRKFDHNSNGFLSLSELGELLRSLGADLRPTEIEAAFIHMDADNDGNINIDEFSGWWSRHDTASLV 143
            GRG F+IF GTL +AQW  + D   G +++ +G  M+  G+ A  KM+       + D   +++ F K+D + +G L  +EL  L   LG+ +   E+EAA   +D D  G I  +EF  WW R    + V
Sbjct:  186 GRGAFYIFFGTLMVAQWPSLYDFAGGAFVIFVGVSMLASGRAAAGKMERF--RDSIVDERGLRSEFSKYDVSRDGKLQPTELAALCEGLGSTMSHKELEAAMFMLDTDRSGTIEFEEFKAWWHREGEMAFV 314

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BLAST of mRNA_S-dermatodea_contig9086.17165.1 vs. uniprot
Match: A0A6U3Z5V8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Z5V8_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.040e-13
Identity = 45/135 (33.33%), Postives = 70/135 (51.85%), Query Frame = 0

Query:    1 NIHKYCAFTTVVWGRGTFFIFVGTLALAQWEFMDIILGFYLVLLGAGMIYWGQEAYKKMDGLVAEMKMKDPETIQAMFRKFDHNS-NGFLSLSELGELLRSLGADLRPTEIEAAFIHMDADNDGNINIDEFSGWW 134
             +H    F   VWGRG  + F G+L  +   F ++I G +++ LGA  I  G+   +K+  +   M   D  ++++ F    H S +G L L E   L  S+G +L+P E+ AAF  +D  ND  ++ DEF  WW
Sbjct:  107 QMHDNAKFLRFVWGRGVLYFFAGSLQFSFMSFFNMISGGFMMFLGALSIMVGRSTARKLSAIFKSMP--DETSLRSTF--LAHASGDGKLGLEEFRRLSDSIGLELKPNELVAAFSTIDKGNDETLSYDEFKIWW 237

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BLAST of mRNA_S-dermatodea_contig9086.17165.1 vs. uniprot
Match: A0A833RBC9_9POAL (Putative calcium-binding protein CML18 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833RBC9_9POAL)

HSP 1 Score: 60.5 bits (145), Expect = 1.360e-8
Identity = 29/77 (37.66%), Postives = 49/77 (63.64%), Query Frame = 0

Query:   66 MKMKDPETIQAMFRKFDHNSNGFLSLSELGELLRSLGADLRPTEIEAAFIHMDADNDGNINIDEFSGW-WSRHDTAS 141
            ++  D   ++ +F +FD N +G +S +EL E+LR+LG+D  P E++     MDAD DG ++ DEF+ + ++ H  AS
Sbjct:   27 LESMDQSEVRKVFSRFDANGDGKISTTELTEILRALGSDAHPDEVQNMMNEMDADQDGFVDFDEFAAFHFNDHGQAS 103

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BLAST of mRNA_S-dermatodea_contig9086.17165.1 vs. uniprot
Match: A0A1J6KE01_NICAT (Calcium-binding allergen ole e 8 n=5 Tax=Nicotiana TaxID=4085 RepID=A0A1J6KE01_NICAT)

HSP 1 Score: 58.5 bits (140), Expect = 5.510e-8
Identity = 26/73 (35.62%), Postives = 44/73 (60.27%), Query Frame = 0

Query:   68 MKDPETIQAMFRKFDHNSNGFLSLSELGELLRSLGADLRPTEIEAAFIHMDADNDGNINIDEFSGWWSRHDTA 140
            ++D E ++ +F +FD N +G +S  EL  +L++LG+D  P E+E     +D D DG IN+ EF+ +    D+ 
Sbjct:   12 LQDMEEVKKVFARFDANGDGMISGDELSGVLKALGSDTSPDEVERMMAEIDTDRDGCINLQEFADFCKSDDSV 84

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BLAST of mRNA_S-dermatodea_contig9086.17165.1 vs. uniprot
Match: UPI001C500459 (calcium-binding protein CML24-like n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C500459)

HSP 1 Score: 58.5 bits (140), Expect = 6.870e-8
Identity = 27/74 (36.49%), Postives = 47/74 (63.51%), Query Frame = 0

Query:   58 KMDGLVAEMKMKDPETIQAMFRKFDHNSNGFLSLSELGELLRSLGADLRPTEIEAAFIHMDADNDGNINIDEFS 131
            K   L + + ++D E ++ +F +FD NS+G +S +ELG +L +LG++  P EI+     +D D DG I++ EF+
Sbjct:    9 KSPSLKSSVYLEDMEELERVFNRFDANSDGKISSTELGNVLNALGSESSPEEIQRMMTEIDTDGDGYIDLKEFT 82

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BLAST of mRNA_S-dermatodea_contig9086.17165.1 vs. uniprot
Match: A0A2K1JKE5_PHYPA (Uncharacterized protein n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JKE5_PHYPA)

HSP 1 Score: 58.9 bits (141), Expect = 8.370e-8
Identity = 31/70 (44.29%), Postives = 44/70 (62.86%), Query Frame = 0

Query:   72 ETIQAMFRKFDHNSNGFLSLSELGELLRSLGADLRPTEIEAAFIHMDADNDGNINIDEFSGWWSRHDTAS 141
            + + A F+ FD +S+G +S SELG +LRSLG DL   E+     + D D DG I++ EF  + +R DTAS
Sbjct:   50 QELTATFKVFDKDSDGKISKSELGTVLRSLGDDLTDEELTEVIQNADGDGDGFIDLQEFINFHTRGDTAS 119

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig9086.17165.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig9086.17165.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L2B6_9PHAE	6.780e-62	64.34	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835YVM7_9STRA	1.050e-18	32.84	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S2XB37_9EUKA	6.760e-17	34.09	Hypothetical protein n=1 Tax=Lotharella oceanica T...	[more]
A0A0L0FU12_9EUKA	5.150e-16	36.23	EF-hand domain-containing protein n=1 Tax=Sphaerof...	[more]
A0A7S1XLD5_9STRA	1.700e-15	34.35	Hypothetical protein n=2 Tax=Phaeomonas parva TaxI...	[more]
A0A6U3Z5V8_9STRA	1.040e-13	33.33	Hypothetical protein n=1 Tax=Ditylum brightwellii ...	[more]
A0A833RBC9_9POAL	1.360e-8	37.66	Putative calcium-binding protein CML18 n=1 Tax=Car...	[more]
A0A1J6KE01_NICAT	5.510e-8	35.62	Calcium-binding allergen ole e 8 n=5 Tax=Nicotiana...	[more]
UPI001C500459	6.870e-8	36.49	calcium-binding protein CML24-like n=1 Tax=Macadam...	[more]
A0A2K1JKE5_PHYPA	8.370e-8	44.29	Uncharacterized protein n=4 Tax=Physcomitrium pate...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 109..137 e-value: 0.025 score: 23.7 coord: 73..101 e-value: 3.4E-4 score: 29.9
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 72..133 e-value: 2.4E-12 score: 47.1
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 105..140 score: 10.524
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 69..104 score: 13.677
None	No IPR available	GENE3D	1.10.238.10		coord: 50..141 e-value: 3.3E-19 score: 71.2
None	No IPR available	PANTHER	PTHR10891:SF814	CALCIUM-BINDING PROTEIN CML27-RELATED	coord: 65..136
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 53..143
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 30..34
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..29
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 35..52
None	No IPR available	TMHMM	TMhelix		coord: 12..30
None	No IPR available	TMHMM	TMhelix		coord: 35..52
IPR039647	EF-hand domain pair protein CML-like	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 65..136
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 118..130
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 82..94
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 61..138

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig9086	contig	S-dermatodea_contig9086:183..5580 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig9086.17165.1	mRNA_S-dermatodea_contig9086.17165.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig9086 183..5580 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig9086.17165.1 ID=prot_S-dermatodea_contig9086.17165.1|Name=mRNA_S-dermatodea_contig9086.17165.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=144bp
NIHKYCAFTTVVWGRGTFFIFVGTLALAQWEFMDIILGFYLVLLGAGMIY
WGQEAYKKMDGLVAEMKMKDPETIQAMFRKFDHNSNGFLSLSELGELLRS
LGADLRPTEIEAAFIHMDADNDGNINIDEFSGWWSRHDTASLV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR039647	EF_hand_pair_protein_CML-like
IPR018247	EF_Hand_1_Ca_BS
IPR011992	EF-hand-dom_pair