mRNA_S-dermatodea_contig9078.17160.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9078.17160.1 vs. uniprot
Match: A0A6H5JIK9_9PHAE (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIK9_9PHAE) HSP 1 Score: 420 bits (1080), Expect = 4.280e-139 Identity = 223/300 (74.33%), Postives = 242/300 (80.67%), Query Frame = 3
Query: 255 MSQDSATAVKSKILQLAAVTDRGAMANAG---VSNAYLGTKDDMRRLVESLEELEPVDKPLTAAQLSGRWELVYTTVELFRTSPFFQMVEGGYDDPEKSNLFFKLHQLQTGSWGASSIGRIIQIIDLIDSVPP----RSSVSEGGEETTAVEGGGEETAM-------GTRPSGSSGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAHCSLAGDNNEVVELVVESTKLKAVEDVPLLPLAGSFFENKDFPTGEVAKKVMGNVPVTKQTVVCIDDVLRVMRDKAGELYIYSRPLES 1112
M+ DS VKSK+LQLAA DRG MAN G VS+AYLGTKDDMR LVESL +L+PV+KPLTA +LSGRWELVYTTVELFR SPFFQMVE GYDDPEKSNLFFKLHQLQTGSWGAS IGR+ Q +DLIDSVPP R + + E A G E + T SG SGSLESEVDLIILPLTS+PLVGFWKLLPTFGGCIATKA CSLAGDNNEVV+L+VESTKLKAVEDVPLLP+AG FE +FPTGEV KKVMGNVPVTKQTVV IDD LRVM DKAGELYIY+RPL+S
Sbjct: 9 MASDSVAEVKSKVLQLAASMDRGGMANPGNRGVSHAYLGTKDDMRLLVESLAQLDPVNKPLTATELSGRWELVYTTVELFRASPFFQMVEAGYDDPEKSNLFFKLHQLQTGSWGASKIGRVTQTLDLIDSVPPSIEGRDATATPAAEAEAAAAGAVEGSDKAGVVEDNTDMSGGSGSLESEVDLIILPLTSVPLVGFWKLLPTFGGCIATKAKCSLAGDNNEVVQLIVESTKLKAVEDVPLLPIAGPLFEGMEFPTGEVTKKVMGNVPVTKQTVVYIDDTLRVMEDKAGELYIYARPLKS 308
BLAST of mRNA_S-dermatodea_contig9078.17160.1 vs. uniprot
Match: A0A0G4EA07_VITBC (PAP_fibrillin domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EA07_VITBC) HSP 1 Score: 182 bits (463), Expect = 6.770e-48 Identity = 102/278 (36.69%), Postives = 156/278 (56.12%), Query Frame = 3
Query: 279 VKSKILQLAAVTDRGAMANAGVSNAYLGTKDDMRRLVESLEELEPVDKPLTAAQLSGRWELVYTTVELFRTSPFFQMVEGGYDDPEKSNLFFKLHQLQTGSWGASSIGRIIQIIDLIDSVPPRSSVSEGGEETTAVEGGGEETAMGTRPSGSSGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAHCSLAGDNNEVVELVVESTKLKAVEDVPLLPLAGSFF-ENKDFPTGEVAKKVMGNVPVTKQTVVCIDDVLRVMRDKAGELYIYSRPLE 1109
+K ++LQLAA TDRG A K+ + +V+ L P D + L+G W LVY + +LFR+SPFF ++ YDD +K++LFFKLH+LQT SWG S I ++ Q T + + + G L S+ ++ +LP T +PLVG+WKLLPTFGG + + A+ S++GD N+ ++L V+ TK+KA ED+PL+PL G F E V K++ G+VP + T V +D +R+ +D GE+++Y R ++
Sbjct: 60 LKMRLLQLAASTDRG-------QQATKRQKEQISNVVDDLSSRGPFD--CSPGMLNGSWVLVYASAQLFRSSPFFLSIQASYDDSKKASLFFKLHELQTRSWGFSEIAQVGQ------------------------------TLLFPEANSTDGRLRSDFNIKVLPSTVVPLVGWWKLLPTFGGNVRSIANASISGDANQHLDLTVDLTKVKASEDLPLMPLLGQFLAEQTGIRVSNVWKRLRGSVPTARVTHVFVDSGMRIAKDSQGEVFVYVRDVD 298
BLAST of mRNA_S-dermatodea_contig9078.17160.1 vs. uniprot
Match: A0A7S1PV05_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1PV05_ALECA) HSP 1 Score: 162 bits (411), Expect = 3.780e-41 Identity = 104/301 (34.55%), Postives = 155/301 (51.50%), Query Frame = 3
Query: 282 KSKILQLAAVTDRGAMANAGVSNAYLGTKDDMRRLVESLEELEPVDKPLTAAQLSGRWELVYTTVELFRTSPFFQMVE----------------GGYDDPEKSNLFFKLHQLQTGSWGASSIGRIIQIIDLIDSVPPRSSVSEGGEETTAVEGGGEETAMGTRPSGSSGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAHCSLAGDNNEVVELVVESTKLKAVEDVPLLPLAGSFFENKDFPTGEVAKKVM-------GNVPVTKQTVVCIDDVLRVMRDKAGELYIYSRPLESL 1115
K++ILQ+AA+TDRG NA V+ Y + M RLVE+L + ++ A L+G WELVY+ VELFR+SPFF +E G D K+ +FF+LHQLQ SWG S++GRI Q +D SG+LES D I LT +P++G++KLLPTFGG + T+A LA D + + + ++ T ++ V +PL F ++ +P V K + G P+ K + + +DD +R+ RD AG +IY+RP+++L
Sbjct: 44 KARILQIAALTDRGQRLNALVAPTYQEKRGQMARLVEALSKQSGA---VSEAALAGEWELVYSDVELFRSSPFFLAIEEALNSSPGIPLLGQWLGCTDPARKAEVFFRLHQLQVLSWGTSTVGRIAQRLDF-----------------------------------ESGTLESSFDTTIFGLTVIPILGWFKLLPTFGGRVVTEAD-GLALDADGALRMELQRTIVRTCPGVERIPLVDGLFMDQWYPVNSVWKLLPWNGGPFDGRPPLCKMSTIYVDDTMRISRDGAGGTFIYTRPVDAL 305
BLAST of mRNA_S-dermatodea_contig9078.17160.1 vs. uniprot
Match: A2BX06_PROM5 (Possible Gram-negative pili assembly chaperone n=1 Tax=Prochlorococcus marinus (strain MIT 9515) TaxID=167542 RepID=A2BX06_PROM5) HSP 1 Score: 160 bits (405), Expect = 5.150e-41 Identity = 101/281 (35.94%), Postives = 154/281 (54.80%), Query Frame = 3
Query: 279 VKSKILQLAAVTDRGAMANAGVSNAYLGTKDDMRRLVESLEELEPVDKPLTAAQLSGRWELVYTTVELFRTSPFFQMVEGGYDDPEKSNLFFKLHQLQTGSWGASSIGRIIQIIDLIDSVPPRSSVSEGGEETTAVEGGGEETAMGTRPSGSSGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAHCSLAGDNNEVVELVVESTKLKAVEDVPLLPLAGSFFENKDFPTGEVAKKVMGNV--PVTKQTVVCIDDVLRVMRDKAGELYIYSRPLESL 1115
VK KI Q+AA+TDRG N +S Y ++M L++ LE L + ++ +LSG WEL+Y+TVELFR+SPFF +E +D KSNLFFKLHQLQ GS+G S+IGRI Q ID + S D II L+++P++G++KLLPTFGG + T A DN+ +++ ++ TK+ VE + +P+ + ++ +P V K+ N P + +++ +D+ +R+M+D G ++IY RP SL
Sbjct: 7 VKKKIYQIAAITDRGQRLNKLISPIYQEKLEEMEALIKILECL---NFEISEEKLSGEWELIYSTVELFRSSPFFLAIEKALNDEFKSNLFFKLHQLQVGSFGLSTIGRIAQNIDF-----------------------------------NKKEFISTFDTIIFGLSTIPILGWFKLLPTFGGRVITLADDLNLKDNS--LQMNLQKTKVSKVEGLNKIPIFSTLLMDRWYPVKGVWDKLPWNKESPSCEVSIIYLDEEMRIMKDIYGSIFIYVRPTISL 247
BLAST of mRNA_S-dermatodea_contig9078.17160.1 vs. uniprot
Match: A0A4D9CZF7_9STRA (PAP_fibrillin domain-containing protein n=2 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZF7_9STRA) HSP 1 Score: 161 bits (407), Expect = 6.420e-41 Identity = 106/305 (34.75%), Postives = 157/305 (51.48%), Query Frame = 3
Query: 258 SQDSATAVKSKILQLAAVTDRGAMANAGVSNA--YLGTKDDMRRLVESL-EELEPVDKPLTAAQLSGRWELVYTTVELFRTSPFFQMVEGGYDDPEKSNLFFKLHQLQTGSWGASSIGRIIQIIDLIDSVPPRSSVSEGGEETTAVEGGGEETAMGTRPSGSSGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAHCSLAGDNNEV----VELVVESTKLKAVEDVPLLPLAGSFFENKDFPTGEVAKKV----MGNVPVTKQTVVCIDDVLRVMRDKAGE-----------LYIYSRPL 1106
S S ++K K+ QLAA+TDRG + + VS+ Y ++ M L+E L + + ++ L G WELVY+T +LFR+SPFFQ +E Y DP KS LFFKLH+LQT SWGAS IGR+ Q IDL + +L S D ++ PLT++PL+G++KLLPTFGG + + A ++ + +E V T K + + +PL G++ ENK FPT E + G+ P VV +D+ R++R+ GE ++Y+RP+
Sbjct: 9 SGSSVASIKLKVCQLAALTDRGKLQDPLVSDEGLYAAERETMVSLLELLIAKGRERKQAMSPVLLEGEWELVYSTKQLFRSSPFFQAIERAYADPTKSELFFKLHELQTCSWGASQIGRVAQTIDL-----------------------------------QAQTLLSSFDTVLFPLTTIPLIGWFKLLPTFGGRVLSLADGLTVSESAQGTALRLEYAVAKTSFKRLAGLKTMPLLGAWLENKQFPTKEAWNLLPWNWSGSGPRCLVEVVYLDEDFRIVREGGGEDGGKDGWEERGYFVYARPV 278
BLAST of mRNA_S-dermatodea_contig9078.17160.1 vs. uniprot
Match: A0A061RCL2_9CHLO (Pilus assembly protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RCL2_9CHLO) HSP 1 Score: 161 bits (408), Expect = 1.260e-40 Identity = 98/282 (34.75%), Postives = 144/282 (51.06%), Query Frame = 3
Query: 279 VKSKILQLAAVTDRGAMANAGVSNAYLGTKDDMRRLVESLEELEPVDKPLTAAQLSGRWELVYTTVELFRTSPFFQMVEGGYDDPEKSNLFFKLHQLQTGSWGASSIGRIIQIIDLIDSVPPRSSVSEGGEETTAVEGGGEETAMGTRPSGSSGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAHCSLAGDNNEVVELVVESTKLKAVEDVP---LLPLAGSFFENKDFPTGEVAKKVM---GNVPVTKQTVVCIDDVLRVMRDKAGELYIYSRPL 1106
+K +ILQ +A DRG + + VS+AY G + + L++ L + + + ++G WELVY+T +LFR+SPFF ++ + D EKS LFFKLH LQ SWGAS++GR+ Q ID S SE D II LT +P+ G++KLLPTFGG + + A +++ ++ T+++A +P LP+ G + DFP V K + G P TV +DD R+M D GEL++YSRPL
Sbjct: 68 IKLQILQHSATLDRGQLHDRLVSDAYEGKRQKILELIQELCSRK-TESRFEKSMIAGEWELVYSTCQLFRSSPFFMAIQAAFADKEKSALFFKLHDLQVKSWGASTVGRVAQNIDF-----------------------------------ESNQFRSEFDTIIFALTVVPIFGWFKLLPTFGGRVISYAEDLEFDIETGRLDMELKRTRVEAAPGIPNIKKLPVLGRALMDNDFPVSRVWKSLPWNGGRAPKCSVTVKYVDDTFRIMEDPDGELFVYSRPL 313
BLAST of mRNA_S-dermatodea_contig9078.17160.1 vs. uniprot
Match: W7T369_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T369_9STRA) HSP 1 Score: 162 bits (409), Expect = 1.710e-40 Identity = 114/325 (35.08%), Postives = 165/325 (50.77%), Query Frame = 3
Query: 150 LNPSDAFLVTTSAPSMGR---RELLLTRSRAARTPTTTMSQDSATAVKSKILQLAAVTDRGAMANAGVSNA--YLGTKDDMRRLVESL-EELEPVDKPLTAAQLSGRWELVYTTVELFRTSPFFQMVEGGYDDPEKSNLFFKLHQLQTGSWGASSIGRIIQIIDLIDSVPPRSSVSEGGEETTAVEGGGEETAMGTRPSGSSGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAHCSLAGDNNEV----VELVVESTKLKAVEDVPLLPLAGSFFENKDFPTGEVAKKV----MGNVPVTKQTVVCIDDVLRVMRDKAGE 1082
+NP + L +S GR R+L L T T S S ++K K+ QLAA+TDRG + + VS+ Y ++ M L+E L + + ++ L G WELVY+T +LFR+SPFFQ +E Y DP KS LFFKLH+LQT SWGAS IGR+ Q IDL + +L S D ++ PLT++PL+G++KLLPTFGG + + A ++++ +E V T K + + +PL G++ ENK FPT E + G P VV +D+ R++R+ GE
Sbjct: 48 INPLTSSLFISSTVHNGRSTARDLRLFS-------TATRSSLSVASIKLKVCQLAALTDRGKLQDPLVSDEGLYAAERETMVSLLELLIAKGRERKQAMSPVLLEGEWELVYSTKQLFRSSPFFQAIERAYADPTKSELFFKLHELQTCSWGASQIGRVAQTIDL-----------------------------------QAQTLLSSFDTVLFPLTTIPLIGWFKLLPTFGGRVDSLADGLTVSESSQGTALRLEYAVAKTSFKRLAGLKTMPLLGAWLENKQFPTKEAWNLLPWNWSGPGPRCLVEVVYLDEDFRIVREGGGE 330
BLAST of mRNA_S-dermatodea_contig9078.17160.1 vs. uniprot
Match: A2C2Q8_PROM1 (PAP_fibrillin domain-containing protein n=6 Tax=Prochlorococcus TaxID=1218 RepID=A2C2Q8_PROM1) HSP 1 Score: 159 bits (401), Expect = 2.000e-40 Identity = 95/277 (34.30%), Postives = 152/277 (54.87%), Query Frame = 3
Query: 279 VKSKILQLAAVTDRGAMANAGVSNAYLGTKDDMRRLVESLEELEPVDKPLTAAQLSGRWELVYTTVELFRTSPFFQMVEGGYDDPEKSNLFFKLHQLQTGSWGASSIGRIIQIIDLIDSVPPRSSVSEGGEETTAVEGGGEETAMGTRPSGSSGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAHCSLAGDNNEVVELVVESTKLKAVEDVPLLPLAGSFFENKDFPTGEVAKKVMGNV--PVTKQTVVCIDDVLRVMRDKAGELYIYSRP 1103
+K+ I Q+AA TDRG NA ++ Y ++M++LVE +L+P+ +T + + G WEL+Y++VELFR+SPFF +E +D KS+LFFKLH LQ GS+G S++GR+ Q ++ + G + S D I LT++P++G++KLLPTFGG + T A+ L NN ++ + +E TK+ V+ + +P S + +P V K + N P + +V+ +D LR++RD G L++Y RP
Sbjct: 7 LKALIYQVAAATDRGQRMNAMIAPMYQNKLEEMKKLVE---DLQPLSDEITQSSIEGEWELIYSSVELFRSSPFFLAIEKALNDKSKSDLFFKLHLLQVGSFGLSTVGRVGQYLNF-----------------------------------TKGEMISTFDTTIFGLTTIPILGWFKLLPTFGGRVITLAN-KLQLKNN-ILSMELEKTKVSEVDGLGKIPFVNSILMERWYPVKNVWKLLPWNKENPNCEISVIYVDKDLRIIRDMHGALFVYIRP 243
BLAST of mRNA_S-dermatodea_contig9078.17160.1 vs. uniprot
Match: Q7V164_PROMP (Possible Gram-negative pili assembly chaperone n=1 Tax=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / NIES-2087 / MED4) TaxID=59919 RepID=Q7V164_PROMP) HSP 1 Score: 158 bits (399), Expect = 3.570e-40 Identity = 100/281 (35.59%), Postives = 150/281 (53.38%), Query Frame = 3
Query: 279 VKSKILQLAAVTDRGAMANAGVSNAYLGTKDDMRRLVESLEELEPVDKPLTAAQLSGRWELVYTTVELFRTSPFFQMVEGGYDDPEKSNLFFKLHQLQTGSWGASSIGRIIQIIDLIDSVPPRSSVSEGGEETTAVEGGGEETAMGTRPSGSSGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAHCSLAGDNNEVVELVVESTKLKAVEDVPLLPLAGSFFENKDFPTGEVAKKVMGNV--PVTKQTVVCIDDVLRVMRDKAGELYIYSRPLESL 1115
+K KI Q+AA+TDRG N ++ Y +M L++ LE + ++ +LSG WEL+Y+TVELFR+SPFF +E +D KSNLFFKLHQLQ GS+G S+IGRI Q ID S D I LT +P++G++KLLPTFGG + T A + D +V+++ ++ TK+ V+ + +PL + + +P EV +K+ N P + +V+ +D+ +RVM+D G ++Y RP SL
Sbjct: 7 IKKKIYQIAAITDRGQRLNKLIAPMYQEKLKEMGNLIDILESF---NTEVSEEKLSGEWELIYSTVELFRSSPFFLAIEKALNDEFKSNLFFKLHQLQVGSFGLSTIGRIAQNIDF-----------------------------------DKKEFLSTFDTTIFGLTIIPILGWFKLLPTFGGRVITLADDLILED--KVLKMNLKKTKVSKVDGLNKIPLFSTLLMERWYPVKEVWEKLPWNKESPSCEVSVIYLDEEVRVMKDIYGSTFVYIRPTISL 247
BLAST of mRNA_S-dermatodea_contig9078.17160.1 vs. uniprot
Match: A0A7S0VCJ3_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VCJ3_9CRYP) HSP 1 Score: 160 bits (405), Expect = 3.980e-40 Identity = 105/302 (34.77%), Postives = 148/302 (49.01%), Query Frame = 3
Query: 279 VKSKILQLAAVTDRGAMANAGVSNAYLGTKDDMRRLVESLEELEPVDKPLTAAQLSGRWELVYTTVELFRTSPFFQMVEGGYD---------------DP-EKSNLFFKLHQLQTGSWGASSIGRIIQIIDLIDSVPPRSSVSEGGEETTAVEGGGEETAMGTRPSGSSGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAHCSLAGDNNEVVELVVESTKLKAVEDVPLLPLAGSFFENKDFPTGEVAKKVM-------GNVPVTKQTVVCIDDVLRVMRDKAGELYIYSRPLESL 1115
+K KILQ+AA+TDRG N V++ Y ++ ++ + +LEP+ K +T L G WEL Y VELFR+SPFF +E D DP +KS +FFKLHQLQ SWGAS++GRI Q ID G ESE D +I LT +P++G++KLLPTFGG + T A N +EL T++ V LP F +K +P EV K + G P TV +D+ +R+ +D +G L++Y+RP+E +
Sbjct: 66 IKQKILQVAALTDRGQRLNTLVADTY---QEKRTQIADLATKLEPMSKDITEEALKGEWELAYADVELFRSSPFFLAIERALDTSPGIPWLGKALGITDPTKKSAMFFKLHQLQVLSWGASTVGRIGQRIDF-----------------------------------EKGEFESEFDTVIFGLTVIPILGWFKLLPTFGGRVVTLADALKLEGNEMTMELA--KTQVVTCPGVKRLPFLDGIFMDKWYPVREVWKLLPWNGGPFDGRAPECAVTVTYVDETMRLTKDMSGALFVYTRPVEGV 327 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9078.17160.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9078.17160.1 >prot_S-dermatodea_contig9078.17160.1 ID=prot_S-dermatodea_contig9078.17160.1|Name=mRNA_S-dermatodea_contig9078.17160.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=370bp MYSKRSRAVGSEYHIVQHHRRTLGRVMAPTASLVLPAIALGLAALECLNPback to top mRNA from alignment at S-dermatodea_contig9078:1300..8085+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9078.17160.1 ID=mRNA_S-dermatodea_contig9078.17160.1|Name=mRNA_S-dermatodea_contig9078.17160.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6786bp|location=Sequence derived from alignment at S-dermatodea_contig9078:1300..8085+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9078:1300..8085+ >mRNA_S-dermatodea_contig9078.17160.1 ID=mRNA_S-dermatodea_contig9078.17160.1|Name=mRNA_S-dermatodea_contig9078.17160.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2220bp|location=Sequence derived from alignment at S-dermatodea_contig9078:1300..8085+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |